RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 C8orf34Q49A92 452 aa23.48■■□□□ 1.35
DDR1-228ENST00000376575 NOM1Q5C9Z4 860 aaKnown RBP23.48■■□□□ 1.35
DDR1-228ENST00000376575 RNF20Q5VTR2 975 aa23.48■■□□□ 1.35
DDR1-228ENST00000376575 RASEFQ8IZ41 740 aa23.48■■□□□ 1.35
DDR1-228ENST00000376575 BEGAINQ9BUH8 593 aa23.48■■□□□ 1.35
DDR1-228ENST00000376575 R3HDMLQ9H3Y0 253 aa23.48■■□□□ 1.35
DDR1-228ENST00000376575 CRHR2Q13324 411 aa23.47■■□□□ 1.35
DDR1-228ENST00000376575 MB21D2Q8IYB1 491 aaPredicted RBP23.47■■□□□ 1.35
DDR1-228ENST00000376575 GMCL1P1Q8NEA9 526 aa23.47■■□□□ 1.35
DDR1-228ENST00000376575 NCOA7Q8NI08 942 aa23.47■■□□□ 1.35
DDR1-228ENST00000376575 ADGRA2Q96PE1 1338 aa23.47■■□□□ 1.35
DDR1-228ENST00000376575 FOXN1O15353 648 aa23.46■■□□□ 1.35
DDR1-228ENST00000376575 TRDNQ13061 729 aa23.46■■□□□ 1.35
DDR1-228ENST00000376575 ZYXQ15942 572 aaKnown RBP23.46■■□□□ 1.35
DDR1-228ENST00000376575 CYB5R4Q7L1T6 521 aa23.46■■□□□ 1.35
DDR1-228ENST00000376575 DGKHQ86XP1 1220 aa23.46■■□□□ 1.35
DDR1-228ENST00000376575 RLFQ13129 1914 aa23.45■■□□□ 1.35
DDR1-228ENST00000376575 F5H6K3 240 aa23.45■■□□□ 1.34
DDR1-228ENST00000376575 ATP2B2Q01814 1243 aa23.45■■□□□ 1.34
DDR1-228ENST00000376575 KLRC3Q07444 240 aa23.45■■□□□ 1.34
DDR1-228ENST00000376575 PABPC4Q13310 644 aaKnown RBP eCLIP23.45■■□□□ 1.34
DDR1-228ENST00000376575 COL9A3Q14050 684 aaPredicted RBP23.45■■□□□ 1.34
DDR1-228ENST00000376575 TAF1CQ15572 869 aaPredicted RBP23.45■■□□□ 1.34
DDR1-228ENST00000376575 CCDC178Q5BJE1 867 aa23.45■■□□□ 1.34
DDR1-228ENST00000376575 CATSPERGQ6ZRH7 1159 aa23.45■■□□□ 1.34
DDR1-228ENST00000376575 IQCA1Q86XH1 822 aa23.45■■□□□ 1.34
DDR1-228ENST00000376575 ZSCAN10Q96SZ4 725 aaPredicted RBP23.45■■□□□ 1.34
DDR1-228ENST00000376575 ZFYVE28Q9HCC9 887 aa23.45■■□□□ 1.34
DDR1-228ENST00000376575 GOPCQ9HD26 462 aa23.45■■□□□ 1.34
DDR1-228ENST00000376575 STX8Q9UNK0 236 aa23.45■■□□□ 1.34
DDR1-228ENST00000376575 WDR46O15213 610 aaKnown RBP23.44■■□□□ 1.34
DDR1-228ENST00000376575 TLR2O60603 784 aa23.44■■□□□ 1.34
DDR1-228ENST00000376575 EIF5BO60841 1220 aaKnown RBP23.44■■□□□ 1.34
DDR1-228ENST00000376575 TBC1D8O95759 1140 aa23.44■■□□□ 1.34
DDR1-228ENST00000376575 ANTXR2P58335 489 aa23.44■■□□□ 1.34
DDR1-228ENST00000376575 SEC23AQ15436 765 aa23.44■■□□□ 1.34
DDR1-228ENST00000376575 PARK7Q99497 189 aaKnown RBP23.44■■□□□ 1.34
DDR1-228ENST00000376575 TMEM47Q9BQJ4 181 aa23.44■■□□□ 1.34
DDR1-228ENST00000376575 ASCC2Q9H1I8 757 aaPredicted RBP23.44■■□□□ 1.34
DDR1-228ENST00000376575 USP17L15C9J2P7 530 aa23.43■■□□□ 1.34
DDR1-228ENST00000376575 USP17L13C9JLJ4 530 aa23.43■■□□□ 1.34
DDR1-228ENST00000376575 USP17L11C9JVI0 530 aa23.43■■□□□ 1.34
DDR1-228ENST00000376575 USP17L18D6R9N7 530 aa23.43■■□□□ 1.34
DDR1-228ENST00000376575 USP17L22D6RA61 530 aa23.43■■□□□ 1.34
DDR1-228ENST00000376575 USP17L17D6RBQ6 530 aa23.43■■□□□ 1.34
DDR1-228ENST00000376575 USP17L19D6RCP7 530 aa23.43■■□□□ 1.34
DDR1-228ENST00000376575 USP17L20D6RJB6 530 aa23.43■■□□□ 1.34
DDR1-228ENST00000376575 NDUFB10O96000 172 aa23.43■■□□□ 1.34
DDR1-228ENST00000376575 CYP2C8P10632 490 aa23.43■■□□□ 1.34
DDR1-228ENST00000376575 HSPA8P11142 646 aaKnown RBP23.43■■□□□ 1.34
DDR1-228ENST00000376575 TOP1P11387 765 aaKnown RBP23.43■■□□□ 1.34
DDR1-228ENST00000376575 USP17L24Q0WX57 530 aa23.43■■□□□ 1.34
DDR1-228ENST00000376575 LRRC47Q8N1G4 583 aaKnown RBP23.43■■□□□ 1.34
DDR1-228ENST00000376575 ENAHQ8N8S7 591 aaPredicted RBP23.43■■□□□ 1.34
DDR1-228ENST00000376575 ZKSCAN3Q9BRR0 538 aa23.43■■□□□ 1.34
DDR1-228ENST00000376575 MTA3Q9BTC8 594 aa23.43■■□□□ 1.34
DDR1-228ENST00000376575 RPAP3Q9H6T3 665 aaPredicted RBP23.43■■□□□ 1.34
DDR1-228ENST00000376575 PNMA3Q9UL41 463 aa23.43■■□□□ 1.34
DDR1-228ENST00000376575 PARP14Q460N5 1801 aa23.43■■□□□ 1.34
DDR1-228ENST00000376575 SEC24BO95487 1268 aa23.42■■□□□ 1.34
DDR1-228ENST00000376575 ZKSCAN1P17029 563 aaPredicted RBP23.42■■□□□ 1.34
DDR1-228ENST00000376575 ADCK5Q3MIX3 580 aa23.42■■□□□ 1.34
DDR1-228ENST00000376575 POTEEQ6S8J3 1075 aa23.42■■□□□ 1.34
DDR1-228ENST00000376575 C17orf99Q6UX52 265 aa23.42■■□□□ 1.34
DDR1-228ENST00000376575 RALYLQ86SE5 291 aaKnown RBP23.42■■□□□ 1.34
DDR1-228ENST00000376575 SPICE1Q8N0Z3 855 aa23.42■■□□□ 1.34
DDR1-228ENST00000376575 SNX14Q9Y5W7 946 aa23.42■■□□□ 1.34
DDR1-228ENST00000376575 TNKSO95271 1327 aa23.41■■□□□ 1.34
DDR1-228ENST00000376575 OSBPP22059 807 aa23.41■■□□□ 1.34
DDR1-228ENST00000376575 CTCFP49711 727 aaPredicted RBP23.41■■□□□ 1.34
DDR1-228ENST00000376575 KRT32Q14532 448 aa23.41■■□□□ 1.34
DDR1-228ENST00000376575 LBX2Q6XYB7 198 aa23.41■■□□□ 1.34
DDR1-228ENST00000376575 IGDCC4Q8TDY8 1250 aa23.41■■□□□ 1.34
DDR1-228ENST00000376575 GMCL1Q96IK5 515 aa23.41■■□□□ 1.34
DDR1-228ENST00000376575 P2RX7Q99572 595 aaKnown RBP23.41■■□□□ 1.34
DDR1-228ENST00000376575 TSKSQ9UJT2 592 aa23.41■■□□□ 1.34
DDR1-228ENST00000376575 GPR25O00155 361 aa23.4■■□□□ 1.34
DDR1-228ENST00000376575 BCRP11274 1271 aa23.4■■□□□ 1.34
DDR1-228ENST00000376575 IL17RAQ96F46 866 aa23.4■■□□□ 1.34
DDR1-228ENST00000376575 NEK1Q96PY6 1258 aa23.4■■□□□ 1.34
DDR1-228ENST00000376575 UBAC1Q9BSL1 405 aa23.4■■□□□ 1.34
DDR1-228ENST00000376575 WDR19Q8NEZ3 1342 aa23.39■■□□□ 1.34
DDR1-228ENST00000376575 SNHG28P0DPA3 235 aa23.39■■□□□ 1.33
DDR1-228ENST00000376575 MCM5P33992 734 aa23.39■■□□□ 1.33
DDR1-228ENST00000376575 EXOSC10Q01780 885 aaKnown RBP23.39■■□□□ 1.33
DDR1-228ENST00000376575 SLFN13Q68D06 897 aa23.39■■□□□ 1.33
DDR1-228ENST00000376575 MYPNQ86TC9 1320 aa23.38■■□□□ 1.33
DDR1-228ENST00000376575 GCLCP48506 637 aaPredicted RBP23.38■■□□□ 1.33
DDR1-228ENST00000376575 HERVK_113P62684 666 aa23.38■■□□□ 1.33
DDR1-228ENST00000376575 IRX3P78415 501 aaPredicted RBP23.38■■□□□ 1.33
DDR1-228ENST00000376575 COG2Q14746 738 aa23.38■■□□□ 1.33
DDR1-228ENST00000376575 FAM83BQ5T0W9 1011 aa23.38■■□□□ 1.33
DDR1-228ENST00000376575 CHST3Q7LGC8 479 aa23.38■■□□□ 1.33
DDR1-228ENST00000376575 ADAMTS5Q9UNA0 930 aa23.38■■□□□ 1.33
DDR1-228ENST00000376575 SPDYE16A6NNV3 312 aaPredicted RBP23.37■■□□□ 1.33
DDR1-228ENST00000376575 GTF3C2Q8WUA4 911 aaPredicted RBP23.37■■□□□ 1.33
DDR1-228ENST00000376575 NUP88Q99567 741 aaPredicted RBP23.37■■□□□ 1.33
DDR1-228ENST00000376575 A0A0G2JMZ2 1700 aa23.36■■□□□ 1.33
DDR1-228ENST00000376575 PRC1O43663 620 aa23.36■■□□□ 1.33
DDR1-228ENST00000376575 PLA2G6O60733 806 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms