RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 NAA15Q9BXJ9 866 aaKnown RBP12.15□□□□□ -0.46
ABCF1-202ENST00000376545 V9GY48 417 aaPredicted RBP12.15□□□□□ -0.46
ABCF1-202ENST00000376545 ITIH6Q6UXX5 1313 aa12.15□□□□□ -0.46
ABCF1-202ENST00000376545 LRRC10BA6NIK2 292 aa12.15□□□□□ -0.47
ABCF1-202ENST00000376545 TRAPPC10P48553 1259 aa12.15□□□□□ -0.47
ABCF1-202ENST00000376545 DYNLL1P63167 89 aaKnown RBP12.15□□□□□ -0.47
ABCF1-202ENST00000376545 AKAP17AQ02040 695 aaKnown RBP12.15□□□□□ -0.47
ABCF1-202ENST00000376545 SLC10A5Q5PT55 438 aa12.15□□□□□ -0.47
ABCF1-202ENST00000376545 DHX58Q96C10 678 aa12.15□□□□□ -0.47
ABCF1-202ENST00000376545 CCDC34Q96HJ3 373 aa12.15□□□□□ -0.47
ABCF1-202ENST00000376545 WTIPA6NIX2 430 aaPredicted RBP12.14□□□□□ -0.47
ABCF1-202ENST00000376545 AKR1B15C9JRZ8 316 aaPredicted RBP12.14□□□□□ -0.47
ABCF1-202ENST00000376545 ATP8B1O43520 1251 aa12.14□□□□□ -0.47
ABCF1-202ENST00000376545 HSP90AA4PQ58FG1 418 aa12.14□□□□□ -0.47
ABCF1-202ENST00000376545 MINPP1Q9UNW1 487 aa12.14□□□□□ -0.47
ABCF1-202ENST00000376545 TEX33O43247 280 aa12.14□□□□□ -0.47
ABCF1-202ENST00000376545 PRDM1O75626 825 aa12.14□□□□□ -0.47
ABCF1-202ENST00000376545 C3orf67Q6ZVT6 689 aa12.14□□□□□ -0.47
ABCF1-202ENST00000376545 IQCA1Q86XH1 822 aa12.14□□□□□ -0.47
ABCF1-202ENST00000376545 ANKRD18AQ8IVF6 992 aa12.14□□□□□ -0.47
ABCF1-202ENST00000376545 UBXN4Q92575 508 aa12.14□□□□□ -0.47
ABCF1-202ENST00000376545 NSUN4Q96CB9 384 aaKnown RBP12.14□□□□□ -0.47
ABCF1-202ENST00000376545 CTAGE1Q96RT6 745 aa12.14□□□□□ -0.47
ABCF1-202ENST00000376545 UBXN6Q9BZV1 441 aa12.14□□□□□ -0.47
ABCF1-202ENST00000376545 SYNRGQ9UMZ2 1314 aa12.14□□□□□ -0.47
ABCF1-202ENST00000376545 CYP2D7A0A087X1C5 515 aa12.13□□□□□ -0.47
ABCF1-202ENST00000376545 URI1O94763 535 aaPredicted RBP12.13□□□□□ -0.47
ABCF1-202ENST00000376545 CASQ1P31415 396 aa12.13□□□□□ -0.47
ABCF1-202ENST00000376545 SBK1Q52WX2 424 aa12.13□□□□□ -0.47
ABCF1-202ENST00000376545 NOM1Q5C9Z4 860 aaKnown RBP12.13□□□□□ -0.47
ABCF1-202ENST00000376545 PDXDC2PQ6P474 469 aa12.13□□□□□ -0.47
ABCF1-202ENST00000376545 SRBD1Q8N5C6 995 aaKnown RBP12.13□□□□□ -0.47
ABCF1-202ENST00000376545 MARCH10Q8NA82 808 aaPredicted RBP12.13□□□□□ -0.47
ABCF1-202ENST00000376545 CARD6Q9BX69 1037 aa12.13□□□□□ -0.47
ABCF1-202ENST00000376545 ABCF2Q9UG63 623 aa12.13□□□□□ -0.47
ABCF1-202ENST00000376545 XDHP47989 1333 aa12.13□□□□□ -0.47
ABCF1-202ENST00000376545 PNMA6AP0CW24 399 aaPredicted RBP12.13□□□□□ -0.47
ABCF1-202ENST00000376545 MAPK8IP2Q13387 824 aaPredicted RBP12.13□□□□□ -0.47
ABCF1-202ENST00000376545 ERFEQ4G0M1 354 aa12.13□□□□□ -0.47
ABCF1-202ENST00000376545 TTC38Q5R3I4 469 aa12.13□□□□□ -0.47
ABCF1-202ENST00000376545 CREBRFQ8IUR6 639 aa12.13□□□□□ -0.47
ABCF1-202ENST00000376545 IQSEC3Q9UPP2 1182 aaPredicted RBP12.13□□□□□ -0.47
ABCF1-202ENST00000376545 ZNF652Q9Y2D9 606 aa12.13□□□□□ -0.47
ABCF1-202ENST00000376545 IL17AQ16552 155 aa12.13□□□□□ -0.47
ABCF1-202ENST00000376545 CAVIN4Q5BKX8 364 aa12.13□□□□□ -0.47
ABCF1-202ENST00000376545 C4orf32Q8N8J7 132 aa12.13□□□□□ -0.47
ABCF1-202ENST00000376545 PYM1Q9BRP8 204 aaKnown RBP12.13□□□□□ -0.47
ABCF1-202ENST00000376545 MRPL44Q9H9J2 332 aaKnown RBP12.13□□□□□ -0.47
ABCF1-202ENST00000376545 BRMS1Q9HCU9 246 aa12.13□□□□□ -0.47
ABCF1-202ENST00000376545 LIMA1Q9UHB6 759 aaKnown RBP12.13□□□□□ -0.47
ABCF1-202ENST00000376545 ADGRG1Q9Y653 693 aa12.13□□□□□ -0.47
ABCF1-202ENST00000376545 ATP2B1P20020 1258 aa12.12□□□□□ -0.47
ABCF1-202ENST00000376545 PLA2G4AP47712 749 aa12.12□□□□□ -0.47
ABCF1-202ENST00000376545 RBL2Q08999 1139 aa12.12□□□□□ -0.47
ABCF1-202ENST00000376545 PTGDRQ13258 359 aa12.12□□□□□ -0.47
ABCF1-202ENST00000376545 DDB1Q16531 1140 aa12.12□□□□□ -0.47
ABCF1-202ENST00000376545 PFKFB3Q16875 520 aaPredicted RBP12.12□□□□□ -0.47
ABCF1-202ENST00000376545 RASGRP2Q7LDG7 609 aa12.12□□□□□ -0.47
ABCF1-202ENST00000376545 GPR161Q8N6U8 529 aaKnown RBP12.12□□□□□ -0.47
ABCF1-202ENST00000376545 MTRQ99707 1265 aa12.12□□□□□ -0.47
ABCF1-202ENST00000376545 NPHP1O15259 732 aa12.12□□□□□ -0.47
ABCF1-202ENST00000376545 NT5C2P49902 561 aa12.12□□□□□ -0.47
ABCF1-202ENST00000376545 GNG11P61952 73 aa12.12□□□□□ -0.47
ABCF1-202ENST00000376545 RAD9BQ6WBX8 426 aa12.12□□□□□ -0.47
ABCF1-202ENST00000376545 MNS1Q8NEH6 495 aa12.12□□□□□ -0.47
ABCF1-202ENST00000376545 CCDC51Q96ER9 411 aa12.12□□□□□ -0.47
ABCF1-202ENST00000376545 DCP1AQ9NPI6 582 aaPredicted RBP12.12□□□□□ -0.47
ABCF1-202ENST00000376545 ATP8A2Q9NTI2 1148 aa12.12□□□□□ -0.47
ABCF1-202ENST00000376545 SBF2Q86WG5 1849 aa12.12□□□□□ -0.47
ABCF1-202ENST00000376545 USP17L12C9JPN9 530 aa12.11□□□□□ -0.47
ABCF1-202ENST00000376545 USP17L21D6R901 530 aa12.11□□□□□ -0.47
ABCF1-202ENST00000376545 MFAP3LO75121 409 aa12.11□□□□□ -0.47
ABCF1-202ENST00000376545 CCDC175P0C221 793 aa12.11□□□□□ -0.47
ABCF1-202ENST00000376545 AFMP43652 599 aa12.11□□□□□ -0.47
ABCF1-202ENST00000376545 ZNF174Q15697 407 aa12.11□□□□□ -0.47
ABCF1-202ENST00000376545 ARL6IP4Q66PJ3 421 aaKnown RBP12.11□□□□□ -0.47
ABCF1-202ENST00000376545 ARGLU1Q9NWB6 273 aaPredicted RBP12.11□□□□□ -0.47
ABCF1-202ENST00000376545 MYH8P13535 1937 aa12.11□□□□□ -0.47
ABCF1-202ENST00000376545 IRS2Q9Y4H2 1338 aa12.11□□□□□ -0.47
ABCF1-202ENST00000376545 hCG_1642624A0A1W2PR95 340 aa12.11□□□□□ -0.47
ABCF1-202ENST00000376545 SCG2P13521 617 aa12.11□□□□□ -0.47
ABCF1-202ENST00000376545 CASP1P29466 404 aa12.11□□□□□ -0.47
ABCF1-202ENST00000376545 MTF1Q14872 753 aa12.11□□□□□ -0.47
ABCF1-202ENST00000376545 RCSD1Q6JBY9 416 aa12.11□□□□□ -0.47
ABCF1-202ENST00000376545 IGSF22Q8N9C0 903 aa12.11□□□□□ -0.47
ABCF1-202ENST00000376545 ANKS1AQ92625 1134 aa12.11□□□□□ -0.47
ABCF1-202ENST00000376545 RWDD2AQ9UIY3 292 aa12.11□□□□□ -0.47
ABCF1-202ENST00000376545 SOWAHDA6NJG2 315 aa12.11□□□□□ -0.47
ABCF1-202ENST00000376545 M0R2N6 131 aa12.11□□□□□ -0.47
ABCF1-202ENST00000376545 MECOMQ03112 1051 aa12.11□□□□□ -0.47
ABCF1-202ENST00000376545 IQUBQ8NA54 791 aa12.11□□□□□ -0.47
ABCF1-202ENST00000376545 SH3GLB2Q9NR46 395 aa12.11□□□□□ -0.47
ABCF1-202ENST00000376545 GTPBP6O43824 516 aaPredicted RBP12.1□□□□□ -0.47
ABCF1-202ENST00000376545 GYPCP04921 128 aa12.1□□□□□ -0.47
ABCF1-202ENST00000376545 EVX2Q03828 476 aa12.1□□□□□ -0.47
ABCF1-202ENST00000376545 PPP2R3AQ06190 1150 aa12.1□□□□□ -0.47
ABCF1-202ENST00000376545 RABGGTAQ92696 567 aa12.1□□□□□ -0.47
ABCF1-202ENST00000376545 ADAMTS3O15072 1205 aa12.1□□□□□ -0.47
ABCF1-202ENST00000376545 IGSF3O75054 1194 aa12.1□□□□□ -0.47
ABCF1-202ENST00000376545 ADAMTS2O95450 1211 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms