RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 RFX5P48382 616 aaPredicted RBP23.12■■□□□ 1.29
TMEFF1-201ENST00000374879 CRYMQ14894 314 aa23.12■■□□□ 1.29
TMEFF1-201ENST00000374879 ZMYM1Q5SVZ6 1142 aa23.12■■□□□ 1.29
TMEFF1-201ENST00000374879 STK11IPQ8N1F8 1099 aa23.12■■□□□ 1.29
TMEFF1-201ENST00000374879 CAGE1Q8TC20 777 aa23.12■■□□□ 1.29
TMEFF1-201ENST00000374879 JAKMIP2Q96AA8 810 aa23.12■■□□□ 1.29
TMEFF1-201ENST00000374879 FRMD3A2A2Y4 597 aa23.11■■□□□ 1.29
TMEFF1-201ENST00000374879 CKAP4Q07065 602 aaKnown RBP23.11■■□□□ 1.29
TMEFF1-201ENST00000374879 SF3B2Q13435 895 aaKnown RBP23.11■■□□□ 1.29
TMEFF1-201ENST00000374879 CDKAL1Q5VV42 579 aa23.11■■□□□ 1.29
TMEFF1-201ENST00000374879 MICALCLQ6ZW33 695 aa23.11■■□□□ 1.29
TMEFF1-201ENST00000374879 DDX17Q92841 729 aaKnown RBP23.11■■□□□ 1.29
TMEFF1-201ENST00000374879 EPN1Q9Y6I3 576 aaPredicted RBP23.11■■□□□ 1.29
TMEFF1-201ENST00000374879 MAST3O60307 1309 aa23.11■■□□□ 1.29
TMEFF1-201ENST00000374879 TMCO5BA8MYB1 307 aa23.11■■□□□ 1.29
TMEFF1-201ENST00000374879 ATP5J2-PTCD1G3V325 749 aa23.11■■□□□ 1.29
TMEFF1-201ENST00000374879 PTCD1O75127 700 aaKnown RBP23.11■■□□□ 1.29
TMEFF1-201ENST00000374879 PDHBP11177 359 aa23.11■■□□□ 1.29
TMEFF1-201ENST00000374879 KCTD16Q68DU8 428 aa23.11■■□□□ 1.29
TMEFF1-201ENST00000374879 HDAC7Q8WUI4 952 aa23.11■■□□□ 1.29
TMEFF1-201ENST00000374879 CTAGE1Q96RT6 745 aa23.11■■□□□ 1.29
TMEFF1-201ENST00000374879 NDUFA10O95299 355 aa23.1■■□□□ 1.29
TMEFF1-201ENST00000374879 EZH2Q15910 746 aaKnown RBP23.1■■□□□ 1.29
TMEFF1-201ENST00000374879 C11orf91Q3C1V1 193 aa23.1■■□□□ 1.29
TMEFF1-201ENST00000374879 TSEN2Q8NCE0 465 aaKnown RBP23.1■■□□□ 1.29
TMEFF1-201ENST00000374879 SYNRGQ9UMZ2 1314 aa23.1■■□□□ 1.29
TMEFF1-201ENST00000374879 KIF1AQ12756 1690 aa23.1■■□□□ 1.29
TMEFF1-201ENST00000374879 COBLO75128 1261 aa23.1■■□□□ 1.29
TMEFF1-201ENST00000374879 EPB41P11171 864 aaKnown RBP23.1■■□□□ 1.29
TMEFF1-201ENST00000374879 BIRC2Q13490 618 aa23.1■■□□□ 1.29
TMEFF1-201ENST00000374879 KIRREL3Q8IZU9 778 aa23.1■■□□□ 1.29
TMEFF1-201ENST00000374879 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.1■■□□□ 1.29
TMEFF1-201ENST00000374879 ITIH6Q6UXX5 1313 aa23.09■■□□□ 1.29
TMEFF1-201ENST00000374879 A6NNZ2 444 aa23.09■■□□□ 1.29
TMEFF1-201ENST00000374879 ERCC3P19447 782 aa23.09■■□□□ 1.29
TMEFF1-201ENST00000374879 ANTXR2P58335 489 aa23.09■■□□□ 1.29
TMEFF1-201ENST00000374879 TUBB8Q3ZCM7 444 aa23.09■■□□□ 1.29
TMEFF1-201ENST00000374879 TRIM6Q9C030 488 aaPredicted RBP23.09■■□□□ 1.29
TMEFF1-201ENST00000374879 PAG1Q9NWQ8 432 aa23.09■■□□□ 1.29
TMEFF1-201ENST00000374879 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.09■■□□□ 1.29
TMEFF1-201ENST00000374879 A0A087WZG4 1122 aa23.09■■□□□ 1.29
TMEFF1-201ENST00000374879 KIF3CO14782 793 aa23.09■■□□□ 1.29
TMEFF1-201ENST00000374879 LSP1P33241 339 aa23.09■■□□□ 1.29
TMEFF1-201ENST00000374879 KRT9P35527 623 aa23.09■■□□□ 1.29
TMEFF1-201ENST00000374879 MRPS25P82663 173 aaKnown RBP23.09■■□□□ 1.29
TMEFF1-201ENST00000374879 IFT88Q13099 833 aa23.09■■□□□ 1.29
TMEFF1-201ENST00000374879 FAM228AQ86W67 206 aa23.09■■□□□ 1.29
TMEFF1-201ENST00000374879 FMNL3Q8IVF7 1028 aa23.09■■□□□ 1.29
TMEFF1-201ENST00000374879 ZNF473Q8WTR7 871 aaKnown RBP23.09■■□□□ 1.29
TMEFF1-201ENST00000374879 DCAF5Q96JK2 942 aa23.09■■□□□ 1.29
TMEFF1-201ENST00000374879 PAGR1Q9BTK6 254 aa23.09■■□□□ 1.29
TMEFF1-201ENST00000374879 CYP27B1O15528 508 aa23.08■■□□□ 1.29
TMEFF1-201ENST00000374879 RTN2O75298 545 aa23.08■■□□□ 1.29
TMEFF1-201ENST00000374879 GUCY1A3Q02108 690 aa23.08■■□□□ 1.29
TMEFF1-201ENST00000374879 RABL6Q3YEC7 729 aaPredicted RBP23.08■■□□□ 1.29
TMEFF1-201ENST00000374879 PHKBQ93100 1093 aa23.08■■□□□ 1.29
TMEFF1-201ENST00000374879 EPN3Q9H201 632 aa23.08■■□□□ 1.29
TMEFF1-201ENST00000374879 HAUS4Q9H6D7 363 aa23.08■■□□□ 1.29
TMEFF1-201ENST00000374879 ALS2Q96Q42 1657 aa23.08■■□□□ 1.28
TMEFF1-201ENST00000374879 MST1RQ04912 1400 aa23.08■■□□□ 1.28
TMEFF1-201ENST00000374879 M0R2C6 588 aa23.08■■□□□ 1.28
TMEFF1-201ENST00000374879 RXRAP19793 462 aa23.08■■□□□ 1.28
TMEFF1-201ENST00000374879 CDR1P51861 262 aa23.08■■□□□ 1.28
TMEFF1-201ENST00000374879 CLNS1AP54105 237 aaKnown RBP23.08■■□□□ 1.28
TMEFF1-201ENST00000374879 CUL4BQ13620 913 aa23.08■■□□□ 1.28
TMEFF1-201ENST00000374879 CCDC122Q5T0U0 273 aa23.08■■□□□ 1.28
TMEFF1-201ENST00000374879 SMYD4Q8IYR2 804 aaPredicted RBP23.08■■□□□ 1.28
TMEFF1-201ENST00000374879 SPATA20Q8TB22 786 aa23.08■■□□□ 1.28
TMEFF1-201ENST00000374879 CABLES1Q8TDN4 633 aa23.08■■□□□ 1.28
TMEFF1-201ENST00000374879 AIDAQ96BJ3 306 aa23.08■■□□□ 1.28
TMEFF1-201ENST00000374879 RNPC3Q96LT9 517 aaKnown RBP23.08■■□□□ 1.28
TMEFF1-201ENST00000374879 DMGDHQ9UI17 866 aaKnown RBP23.08■■□□□ 1.28
TMEFF1-201ENST00000374879 MB21D2Q8IYB1 491 aaPredicted RBP23.07■■□□□ 1.28
TMEFF1-201ENST00000374879 ACTN4O43707 911 aaKnown RBP23.07■■□□□ 1.28
TMEFF1-201ENST00000374879 CHRNA2Q15822 529 aa23.07■■□□□ 1.28
TMEFF1-201ENST00000374879 SNCBQ16143 134 aa23.07■■□□□ 1.28
TMEFF1-201ENST00000374879 RUFY1Q96T51 708 aa23.07■■□□□ 1.28
TMEFF1-201ENST00000374879 SSBP05455 408 aaKnown RBP eCLIP23.06■■□□□ 1.28
TMEFF1-201ENST00000374879 CALRP27797 417 aaKnown RBP23.06■■□□□ 1.28
TMEFF1-201ENST00000374879 CASP1P29466 404 aa23.06■■□□□ 1.28
TMEFF1-201ENST00000374879 SEC24CP53992 1094 aa23.06■■□□□ 1.28
TMEFF1-201ENST00000374879 HERVK_113P62684 666 aa23.06■■□□□ 1.28
TMEFF1-201ENST00000374879 MAP2K1Q02750 393 aaPredicted RBP23.06■■□□□ 1.28
TMEFF1-201ENST00000374879 PLCB4Q15147 1175 aa23.06■■□□□ 1.28
TMEFF1-201ENST00000374879 USP49Q70CQ1 688 aa23.06■■□□□ 1.28
TMEFF1-201ENST00000374879 LRRC1Q9BTT6 524 aa23.06■■□□□ 1.28
TMEFF1-201ENST00000374879 VPS16Q9H269 839 aa23.06■■□□□ 1.28
TMEFF1-201ENST00000374879 N4BP3O15049 544 aa23.06■■□□□ 1.28
TMEFF1-201ENST00000374879 NNTQ13423 1086 aa23.06■■□□□ 1.28
TMEFF1-201ENST00000374879 FBXO2Q9UK22 296 aaPredicted RBP23.06■■□□□ 1.28
TMEFF1-201ENST00000374879 AFDNP55196 1824 aaKnown RBP23.05■■□□□ 1.28
TMEFF1-201ENST00000374879 INHBEP58166 350 aa23.05■■□□□ 1.28
TMEFF1-201ENST00000374879 HDLBPQ00341 1268 aaKnown RBP23.05■■□□□ 1.28
TMEFF1-201ENST00000374879 TBC1D8BQ0IIM8 1120 aa23.05■■□□□ 1.28
TMEFF1-201ENST00000374879 FKBP15Q5T1M5 1219 aa23.05■■□□□ 1.28
TMEFF1-201ENST00000374879 PARP9Q8IXQ6 854 aa23.05■■□□□ 1.28
TMEFF1-201ENST00000374879 UBE2Q2LH0YL09 131 aa23.05■■□□□ 1.28
TMEFF1-201ENST00000374879 HSF2BPO75031 334 aa23.05■■□□□ 1.28
TMEFF1-201ENST00000374879 CCNHP51946 323 aaPredicted RBP23.05■■□□□ 1.28
TMEFF1-201ENST00000374879 SLC7A5Q01650 507 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 185.4 ms