RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 TSPY3P0CV98 308 aa15.24■□□□□ 0.03
A1CF-204ENST00000373997 TSPY8P0CW00 308 aa15.24■□□□□ 0.03
A1CF-204ENST00000373997 IARSP41252 1262 aaKnown RBP15.24■□□□□ 0.03
A1CF-204ENST00000373997 ME1P48163 572 aa15.24■□□□□ 0.03
A1CF-204ENST00000373997 TPD52L1Q16890 204 aaPredicted RBP15.24■□□□□ 0.03
A1CF-204ENST00000373997 DALRD3Q5D0E6 543 aaKnown RBP15.24■□□□□ 0.03
A1CF-204ENST00000373997 C16orf86Q6ZW13 317 aa15.24■□□□□ 0.03
A1CF-204ENST00000373997 CATIPQ7Z7H3 387 aa15.24■□□□□ 0.03
A1CF-204ENST00000373997 CMTR1Q8N1G2 835 aaKnown RBP15.24■□□□□ 0.03
A1CF-204ENST00000373997 RGS22Q8NE09 1264 aa15.24■□□□□ 0.03
A1CF-204ENST00000373997 MRPS27Q92552 414 aaKnown RBP15.24■□□□□ 0.03
A1CF-204ENST00000373997 SLC26A6Q9BXS9 759 aa15.24■□□□□ 0.03
A1CF-204ENST00000373997 RASA1P20936 1047 aa15.23■□□□□ 0.03
A1CF-204ENST00000373997 CDK8P49336 464 aa15.23■□□□□ 0.03
A1CF-204ENST00000373997 CACNB3P54284 484 aa15.23■□□□□ 0.03
A1CF-204ENST00000373997 SOGA3Q5TF21 947 aa15.23■□□□□ 0.03
A1CF-204ENST00000373997 ADALQ6DHV7 355 aa15.23■□□□□ 0.03
A1CF-204ENST00000373997 DHX40Q8IX18 779 aaKnown RBP15.23■□□□□ 0.03
A1CF-204ENST00000373997 ZNF444Q8N0Y2 327 aaPredicted RBP15.23■□□□□ 0.03
A1CF-204ENST00000373997 CCDC82Q8N4S0 544 aa15.23■□□□□ 0.03
A1CF-204ENST00000373997 FANCBQ8NB91 859 aa15.23■□□□□ 0.03
A1CF-204ENST00000373997 CCDC112Q8NEF3 446 aa15.23■□□□□ 0.03
A1CF-204ENST00000373997 ZDHHC15Q96MV8 337 aa15.23■□□□□ 0.03
A1CF-204ENST00000373997 ALG1Q9BT22 464 aa15.23■□□□□ 0.03
A1CF-204ENST00000373997 KCND1Q9NSA2 647 aa15.23■□□□□ 0.03
A1CF-204ENST00000373997 PRDM4Q9UKN5 801 aa15.23■□□□□ 0.03
A1CF-204ENST00000373997 UBE2Q2LH0YL09 131 aa15.23■□□□□ 0.03
A1CF-204ENST00000373997 SSRP1Q08945 709 aaKnown RBP15.23■□□□□ 0.03
A1CF-204ENST00000373997 FEZ1Q99689 392 aa15.23■□□□□ 0.03
A1CF-204ENST00000373997 FTOQ9C0B1 505 aaKnown RBP eCLIP15.23■□□□□ 0.03
A1CF-204ENST00000373997 RCAN1P53805 252 aa15.22■□□□□ 0.03
A1CF-204ENST00000373997 GSDMDP57764 484 aa15.22■□□□□ 0.03
A1CF-204ENST00000373997 NCBP1Q09161 790 aaKnown RBP15.22■□□□□ 0.03
A1CF-204ENST00000373997 NFIAQ12857 509 aa15.22■□□□□ 0.03
A1CF-204ENST00000373997 DHX8Q14562 1220 aaKnown RBP15.22■□□□□ 0.03
A1CF-204ENST00000373997 FMR1NBQ8N0W7 255 aaPredicted RBP15.22■□□□□ 0.03
A1CF-204ENST00000373997 KCNG4Q8TDN1 519 aa15.22■□□□□ 0.03
A1CF-204ENST00000373997 SGIP1Q9BQI5 828 aa15.22■□□□□ 0.03
A1CF-204ENST00000373997 ZNF287Q9HBT7 754 aa15.22■□□□□ 0.03
A1CF-204ENST00000373997 CCDC196A0A1B0GTZ2 297 aa15.22■□□□□ 0.03
A1CF-204ENST00000373997 PSMD14O00487 310 aa15.22■□□□□ 0.03
A1CF-204ENST00000373997 YEATS4O95619 227 aa15.22■□□□□ 0.03
A1CF-204ENST00000373997 IFNAR1P17181 557 aa15.22■□□□□ 0.03
A1CF-204ENST00000373997 NIM1KQ8IY84 436 aa15.22■□□□□ 0.03
A1CF-204ENST00000373997 BPIFA3Q9BQP9 254 aa15.22■□□□□ 0.03
A1CF-204ENST00000373997 OSBPL5Q9H0X9 879 aaPredicted RBP15.22■□□□□ 0.03
A1CF-204ENST00000373997 IL17RBQ9NRM6 502 aa15.22■□□□□ 0.03
A1CF-204ENST00000373997 STK36Q9NRP7 1315 aa15.21■□□□□ 0.03
A1CF-204ENST00000373997 DDAH1O94760 285 aa15.21■□□□□ 0.03
A1CF-204ENST00000373997 FMNL1O95466 1100 aaPredicted RBP15.21■□□□□ 0.03
A1CF-204ENST00000373997 HDLBPQ00341 1268 aaKnown RBP15.21■□□□□ 0.03
A1CF-204ENST00000373997 CEP135Q66GS9 1140 aa15.21■□□□□ 0.03
A1CF-204ENST00000373997 RCSD1Q6JBY9 416 aa15.21■□□□□ 0.03
A1CF-204ENST00000373997 BRAPQ7Z569 592 aa15.21■□□□□ 0.03
A1CF-204ENST00000373997 KAT14Q9H8E8 782 aa15.21■□□□□ 0.03
A1CF-204ENST00000373997 IMPACTQ9P2X3 320 aa15.21■□□□□ 0.03
A1CF-204ENST00000373997 SERPINA10Q9UK55 444 aa15.21■□□□□ 0.03
A1CF-204ENST00000373997 PCDHA7Q9UN72 937 aa15.21■□□□□ 0.03
A1CF-204ENST00000373997 SKILP12757 684 aa15.2■□□□□ 0.02
A1CF-204ENST00000373997 DMTNQ08495 405 aa15.2■□□□□ 0.02
A1CF-204ENST00000373997 TCP10Q12799 353 aa15.2■□□□□ 0.02
A1CF-204ENST00000373997 TROAPQ12815 778 aa15.2■□□□□ 0.02
A1CF-204ENST00000373997 CFAP100Q494V2 611 aa15.2■□□□□ 0.02
A1CF-204ENST00000373997 RSBN1LQ6PCB5 846 aaPredicted RBP15.2■□□□□ 0.02
A1CF-204ENST00000373997 TRIM22Q8IYM9 498 aa15.2■□□□□ 0.02
A1CF-204ENST00000373997 LINC00301Q8NCQ3 95 aa15.2■□□□□ 0.02
A1CF-204ENST00000373997 FBXO18Q8NFZ0 1043 aa15.2■□□□□ 0.02
A1CF-204ENST00000373997 POLR3EQ9NVU0 708 aa15.2■□□□□ 0.02
A1CF-204ENST00000373997 CGNQ9P2M7 1197 aaKnown RBP15.2■□□□□ 0.02
A1CF-204ENST00000373997 BCS1LQ9Y276 419 aa15.2■□□□□ 0.02
A1CF-204ENST00000373997 GREB1LQ9C091 1923 aaPredicted RBP15.2■□□□□ 0.02
A1CF-204ENST00000373997 KIF2AO00139 706 aaPredicted RBP15.2■□□□□ 0.02
A1CF-204ENST00000373997 PLEKHA8P1O95397 391 aa15.2■□□□□ 0.02
A1CF-204ENST00000373997 CALM1P0DP23 149 aa15.2■□□□□ 0.02
A1CF-204ENST00000373997 CALM2P0DP24 149 aa15.2■□□□□ 0.02
A1CF-204ENST00000373997 CALM3P0DP25 149 aa15.2■□□□□ 0.02
A1CF-204ENST00000373997 ZSCAN20P17040 1043 aaPredicted RBP15.2■□□□□ 0.02
A1CF-204ENST00000373997 GUCY1A2P33402 732 aa15.2■□□□□ 0.02
A1CF-204ENST00000373997 NYAP1Q6ZVC0 841 aa15.2■□□□□ 0.02
A1CF-204ENST00000373997 NBPF11Q86T75 865 aa15.2■□□□□ 0.02
A1CF-204ENST00000373997 SDF4Q9BRK5 362 aa15.2■□□□□ 0.02
A1CF-204ENST00000373997 MRIQ9BWK5 157 aa15.2■□□□□ 0.02
A1CF-204ENST00000373997 GTPBP4Q9BZE4 634 aaKnown RBP15.2■□□□□ 0.02
A1CF-204ENST00000373997 TAOK3Q9H2K8 898 aa15.2■□□□□ 0.02
A1CF-204ENST00000373997 PTGER2P43116 358 aa15.19■□□□□ 0.02
A1CF-204ENST00000373997 STK38Q15208 465 aa15.19■□□□□ 0.02
A1CF-204ENST00000373997 ZFPM1Q8IX07 1006 aa15.19■□□□□ 0.02
A1CF-204ENST00000373997 CRACR2BQ8N4Y2 399 aaPredicted RBP15.19■□□□□ 0.02
A1CF-204ENST00000373997 AOPEPQ8N6M6 819 aa15.19■□□□□ 0.02
A1CF-204ENST00000373997 STX8Q9UNK0 236 aa15.19■□□□□ 0.02
A1CF-204ENST00000373997 MTMR7Q9Y216 660 aa15.19■□□□□ 0.02
A1CF-204ENST00000373997 ZBTB12Q9Y330 459 aaPredicted RBP15.19■□□□□ 0.02
A1CF-204ENST00000373997 HLA-DOAP06340 250 aa15.19■□□□□ 0.02
A1CF-204ENST00000373997 NT5C2P49902 561 aa15.19■□□□□ 0.02
A1CF-204ENST00000373997 CBX1P83916 185 aa15.19■□□□□ 0.02
A1CF-204ENST00000373997 CCZ1BP86790 482 aa15.19■□□□□ 0.02
A1CF-204ENST00000373997 CCZ1P86791 482 aaPredicted RBP15.19■□□□□ 0.02
A1CF-204ENST00000373997 SF3A1Q15459 793 aaKnown RBP15.19■□□□□ 0.02
A1CF-204ENST00000373997 PTPN14Q15678 1187 aa15.19■□□□□ 0.02
A1CF-204ENST00000373997 ZRSR1Q15695 479 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms