RNA–Protein interactions for RNA: ENST00000373667.4

COL16A1-201, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-201ENST00000373667 VCPKMTQ9H867 229 aa22.38■■□□□ 1.17
COL16A1-201ENST00000373667 EPB41L2O43491 1005 aaKnown RBP22.37■■□□□ 1.17
COL16A1-201ENST00000373667 SEC24BO95487 1268 aa22.37■■□□□ 1.17
COL16A1-201ENST00000373667 HSPA1AP0DMV8 641 aaKnown RBP22.37■■□□□ 1.17
COL16A1-201ENST00000373667 HSPA1BP0DMV9 641 aaKnown RBP22.37■■□□□ 1.17
COL16A1-201ENST00000373667 C8orf34Q49A92 452 aa22.37■■□□□ 1.17
COL16A1-201ENST00000373667 CCDC178Q5BJE1 867 aa22.37■■□□□ 1.17
COL16A1-201ENST00000373667 CHST3Q7LGC8 479 aa22.37■■□□□ 1.17
COL16A1-201ENST00000373667 C12orf42Q96LP6 360 aa22.37■■□□□ 1.17
COL16A1-201ENST00000373667 ZSCAN10Q96SZ4 725 aaPredicted RBP22.37■■□□□ 1.17
COL16A1-201ENST00000373667 TSKSQ9UJT2 592 aa22.37■■□□□ 1.17
COL16A1-201ENST00000373667 MTMR7Q9Y216 660 aa22.37■■□□□ 1.17
COL16A1-201ENST00000373667 MYH4Q9Y623 1939 aa22.36■■□□□ 1.17
COL16A1-201ENST00000373667 F5H6K3 240 aa22.36■■□□□ 1.17
COL16A1-201ENST00000373667 OSBPP22059 807 aa22.36■■□□□ 1.17
COL16A1-201ENST00000373667 KLRC3Q07444 240 aa22.36■■□□□ 1.17
COL16A1-201ENST00000373667 KRT32Q14532 448 aa22.36■■□□□ 1.17
COL16A1-201ENST00000373667 KIAA1755Q5JYT7 1200 aa22.36■■□□□ 1.17
COL16A1-201ENST00000373667 TTC14Q96N46 770 aa22.36■■□□□ 1.17
COL16A1-201ENST00000373667 ZFYVE28Q9HCC9 887 aa22.36■■□□□ 1.17
COL16A1-201ENST00000373667 SNX14Q9Y5W7 946 aa22.36■■□□□ 1.17
COL16A1-201ENST00000373667 IFIT3O14879 490 aaKnown RBP22.35■■□□□ 1.17
COL16A1-201ENST00000373667 CA12O43570 354 aa22.35■■□□□ 1.17
COL16A1-201ENST00000373667 VCAM1P19320 739 aa22.35■■□□□ 1.17
COL16A1-201ENST00000373667 TSGA10IPQ3SY00 556 aa22.35■■□□□ 1.17
COL16A1-201ENST00000373667 NEK1Q96PY6 1258 aa22.35■■□□□ 1.17
COL16A1-201ENST00000373667 TMEM47Q9BQJ4 181 aa22.35■■□□□ 1.17
COL16A1-201ENST00000373667 RPAP3Q9H6T3 665 aaPredicted RBP22.35■■□□□ 1.17
COL16A1-201ENST00000373667 ZCCHC17Q9NP64 241 aaKnown RBP22.35■■□□□ 1.17
COL16A1-201ENST00000373667 ISY1Q9ULR0 285 aaKnown RBP22.35■■□□□ 1.17
COL16A1-201ENST00000373667 TNKSO95271 1327 aa22.34■■□□□ 1.17
COL16A1-201ENST00000373667 ERICH2A1L162 156 aa22.34■■□□□ 1.17
COL16A1-201ENST00000373667 USP17L15C9J2P7 530 aa22.34■■□□□ 1.17
COL16A1-201ENST00000373667 USP17L13C9JLJ4 530 aa22.34■■□□□ 1.17
COL16A1-201ENST00000373667 USP17L11C9JVI0 530 aa22.34■■□□□ 1.17
COL16A1-201ENST00000373667 USP17L18D6R9N7 530 aa22.34■■□□□ 1.17
COL16A1-201ENST00000373667 USP17L22D6RA61 530 aa22.34■■□□□ 1.17
COL16A1-201ENST00000373667 USP17L17D6RBQ6 530 aa22.34■■□□□ 1.17
COL16A1-201ENST00000373667 USP17L19D6RCP7 530 aa22.34■■□□□ 1.17
COL16A1-201ENST00000373667 USP17L20D6RJB6 530 aa22.34■■□□□ 1.17
COL16A1-201ENST00000373667 CYP2C8P10632 490 aa22.34■■□□□ 1.17
COL16A1-201ENST00000373667 TOP1P11387 765 aaKnown RBP22.34■■□□□ 1.17
COL16A1-201ENST00000373667 IRX3P78415 501 aaPredicted RBP22.34■■□□□ 1.17
COL16A1-201ENST00000373667 USP17L24Q0WX57 530 aa22.34■■□□□ 1.17
COL16A1-201ENST00000373667 ADCK5Q3MIX3 580 aa22.34■■□□□ 1.17
COL16A1-201ENST00000373667 SLFN13Q68D06 897 aa22.34■■□□□ 1.17
COL16A1-201ENST00000373667 DGKHQ86XP1 1220 aa22.34■■□□□ 1.17
COL16A1-201ENST00000373667 MB21D2Q8IYB1 491 aaPredicted RBP22.34■■□□□ 1.17
COL16A1-201ENST00000373667 LPAR1Q92633 364 aa22.34■■□□□ 1.17
COL16A1-201ENST00000373667 KCNB2Q92953 911 aa22.34■■□□□ 1.17
COL16A1-201ENST00000373667 TANGO6Q9C0B7 1094 aa22.34■■□□□ 1.17
COL16A1-201ENST00000373667 SAGE1Q9NXZ1 904 aa22.34■■□□□ 1.17
COL16A1-201ENST00000373667 PNMA3Q9UL41 463 aa22.34■■□□□ 1.17
COL16A1-201ENST00000373667 SLC45A1Q9Y2W3 748 aa22.34■■□□□ 1.17
COL16A1-201ENST00000373667 PRC1O43663 620 aa22.33■■□□□ 1.17
COL16A1-201ENST00000373667 NDUFB10O96000 172 aa22.33■■□□□ 1.17
COL16A1-201ENST00000373667 MCM5P33992 734 aa22.33■■□□□ 1.17
COL16A1-201ENST00000373667 CRHR2Q13324 411 aa22.33■■□□□ 1.17
COL16A1-201ENST00000373667 SART3Q15020 963 aaKnown RBP22.33■■□□□ 1.17
COL16A1-201ENST00000373667 RCSD1Q6JBY9 416 aa22.33■■□□□ 1.17
COL16A1-201ENST00000373667 SAMD1Q6SPF0 538 aaPredicted RBP22.33■■□□□ 1.17
COL16A1-201ENST00000373667 ENAHQ8N8S7 591 aaPredicted RBP22.33■■□□□ 1.17
COL16A1-201ENST00000373667 JAKMIP1Q96N16 626 aaKnown RBP22.33■■□□□ 1.17
COL16A1-201ENST00000373667 PARK7Q99497 189 aaKnown RBP22.33■■□□□ 1.17
COL16A1-201ENST00000373667 ASCC2Q9H1I8 757 aaPredicted RBP22.33■■□□□ 1.17
COL16A1-201ENST00000373667 R3HDMLQ9H3Y0 253 aa22.33■■□□□ 1.17
COL16A1-201ENST00000373667 KAT14Q9H8E8 782 aa22.33■■□□□ 1.17
COL16A1-201ENST00000373667 LOC285556D6RIA3 1793 aa22.33■■□□□ 1.16
COL16A1-201ENST00000373667 FOXN1O15353 648 aa22.32■■□□□ 1.16
COL16A1-201ENST00000373667 HOXA7P31268 230 aaPredicted RBP22.32■■□□□ 1.16
COL16A1-201ENST00000373667 NOVP48745 357 aa22.32■■□□□ 1.16
COL16A1-201ENST00000373667 TMEM67Q5HYA8 995 aa22.32■■□□□ 1.16
COL16A1-201ENST00000373667 FAM83BQ5T0W9 1011 aa22.32■■□□□ 1.16
COL16A1-201ENST00000373667 IFIT1BQ5T764 474 aaKnown RBP22.32■■□□□ 1.16
COL16A1-201ENST00000373667 CATSPERGQ6ZRH7 1159 aa22.32■■□□□ 1.16
COL16A1-201ENST00000373667 NUP88Q99567 741 aaPredicted RBP22.32■■□□□ 1.16
COL16A1-201ENST00000373667 SYNPO2Q9UMS6 1093 aa22.32■■□□□ 1.16
COL16A1-201ENST00000373667 WDR46O15213 610 aaKnown RBP22.31■■□□□ 1.16
COL16A1-201ENST00000373667 ANTXR2P58335 489 aa22.31■■□□□ 1.16
COL16A1-201ENST00000373667 WTAPQ15007 396 aa22.31■■□□□ 1.16
COL16A1-201ENST00000373667 GMCL1P1Q8NEA9 526 aa22.31■■□□□ 1.16
COL16A1-201ENST00000373667 SMCR8Q8TEV9 937 aaPredicted RBP22.31■■□□□ 1.16
COL16A1-201ENST00000373667 P2RX7Q99572 595 aaKnown RBP22.31■■□□□ 1.16
COL16A1-201ENST00000373667 COL9A3Q14050 684 aaPredicted RBP22.3■■□□□ 1.16
COL16A1-201ENST00000373667 ANKS1AQ92625 1134 aa22.3■■□□□ 1.16
COL16A1-201ENST00000373667 LRRC2Q9BYS8 371 aa22.3■■□□□ 1.16
COL16A1-201ENST00000373667 TLR2O60603 784 aa22.29■■□□□ 1.16
COL16A1-201ENST00000373667 HMGB1P09429 215 aaKnown RBP22.29■■□□□ 1.16
COL16A1-201ENST00000373667 BMP3P12645 472 aa22.29■■□□□ 1.16
COL16A1-201ENST00000373667 CPA1P15085 419 aa22.29■■□□□ 1.16
COL16A1-201ENST00000373667 PSMA5P28066 241 aa22.29■■□□□ 1.16
COL16A1-201ENST00000373667 SLC1A4P43007 532 aa22.29■■□□□ 1.16
COL16A1-201ENST00000373667 CTCFP49711 727 aaPredicted RBP22.29■■□□□ 1.16
COL16A1-201ENST00000373667 COG2Q14746 738 aa22.29■■□□□ 1.16
COL16A1-201ENST00000373667 SEC23AQ15436 765 aa22.29■■□□□ 1.16
COL16A1-201ENST00000373667 DHX32Q7L7V1 743 aaKnown RBP22.29■■□□□ 1.16
COL16A1-201ENST00000373667 PNMA1Q8ND90 353 aa22.29■■□□□ 1.16
COL16A1-201ENST00000373667 CPA4Q9UI42 421 aa22.29■■□□□ 1.16
COL16A1-201ENST00000373667 FLOT1O75955 427 aa22.28■■□□□ 1.16
COL16A1-201ENST00000373667 HERVK_113P62684 666 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms