RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 CDC25AP30304 524 aa20.47■□□□□ 0.87
HNF4A-203ENST00000372920 FERMT2Q96AC1 680 aa20.47■□□□□ 0.87
HNF4A-203ENST00000372920 PHF20Q9BVI0 1012 aa20.47■□□□□ 0.87
HNF4A-203ENST00000372920 PNPLA7Q6ZV29 1317 aa20.46■□□□□ 0.87
HNF4A-203ENST00000372920 XBP1P17861 261 aa20.46■□□□□ 0.87
HNF4A-203ENST00000372920 ARHGAP25P42331 645 aa20.46■□□□□ 0.87
HNF4A-203ENST00000372920 RNF41Q9H4P4 317 aaPredicted RBP20.46■□□□□ 0.87
HNF4A-203ENST00000372920 CTAGE15A4D2H0 777 aa20.46■□□□□ 0.87
HNF4A-203ENST00000372920 N4BP3O15049 544 aa20.46■□□□□ 0.87
HNF4A-203ENST00000372920 EIF3JO75822 258 aaKnown RBP20.46■□□□□ 0.87
HNF4A-203ENST00000372920 CTAGE8P0CG41 777 aa20.46■□□□□ 0.87
HNF4A-203ENST00000372920 WHAMMP3Q1A5X7 153 aa20.46■□□□□ 0.87
HNF4A-203ENST00000372920 CTAGE6Q86UF2 777 aa20.46■□□□□ 0.87
HNF4A-203ENST00000372920 CTAGE4Q8IX94 777 aa20.46■□□□□ 0.87
HNF4A-203ENST00000372920 MSL3Q8N5Y2 521 aaKnown RBP20.46■□□□□ 0.87
HNF4A-203ENST00000372920 ACTN2P35609 894 aa20.45■□□□□ 0.86
HNF4A-203ENST00000372920 PPARAQ07869 468 aa20.45■□□□□ 0.86
HNF4A-203ENST00000372920 ZNF174Q15697 407 aa20.45■□□□□ 0.86
HNF4A-203ENST00000372920 CWC15Q9P013 229 aaKnown RBP20.45■□□□□ 0.86
HNF4A-203ENST00000372920 LIMA1Q9UHB6 759 aaKnown RBP20.45■□□□□ 0.86
HNF4A-203ENST00000372920 TNKSO95271 1327 aa20.45■□□□□ 0.86
HNF4A-203ENST00000372920 SEC23AQ15436 765 aa20.45■□□□□ 0.86
HNF4A-203ENST00000372920 PIGBQ92521 554 aa20.45■□□□□ 0.86
HNF4A-203ENST00000372920 VPS16Q9H269 839 aa20.45■□□□□ 0.86
HNF4A-203ENST00000372920 PIP4K2BP78356 416 aa20.45■□□□□ 0.86
HNF4A-203ENST00000372920 NOM1Q5C9Z4 860 aaKnown RBP20.45■□□□□ 0.86
HNF4A-203ENST00000372920 BLZF1Q9H2G9 400 aa20.45■□□□□ 0.86
HNF4A-203ENST00000372920 VGLL3A8MV65 326 aa20.44■□□□□ 0.86
HNF4A-203ENST00000372920 NUP88Q99567 741 aaPredicted RBP20.44■□□□□ 0.86
HNF4A-203ENST00000372920 LCMT1Q9UIC8 334 aa20.44■□□□□ 0.86
HNF4A-203ENST00000372920 FAN1Q9Y2M0 1017 aa20.44■□□□□ 0.86
HNF4A-203ENST00000372920 XDHP47989 1333 aa20.44■□□□□ 0.86
HNF4A-203ENST00000372920 BCL9LQ86UU0 1499 aa20.44■□□□□ 0.86
HNF4A-203ENST00000372920 LRRC10BA6NIK2 292 aa20.44■□□□□ 0.86
HNF4A-203ENST00000372920 CYP26C1Q6V0L0 522 aa20.44■□□□□ 0.86
HNF4A-203ENST00000372920 CARD10Q9BWT7 1032 aa20.44■□□□□ 0.86
HNF4A-203ENST00000372920 COL5A2P05997 1499 aaPredicted RBP20.44■□□□□ 0.86
HNF4A-203ENST00000372920 FUT2Q10981 343 aa20.43■□□□□ 0.86
HNF4A-203ENST00000372920 CASP8Q14790 479 aa20.43■□□□□ 0.86
HNF4A-203ENST00000372920 RRAGBQ5VZM2 374 aa20.43■□□□□ 0.86
HNF4A-203ENST00000372920 NOA1Q8NC60 698 aaKnown RBP20.43■□□□□ 0.86
HNF4A-203ENST00000372920 SLF1Q9BQI6 1058 aa20.43■□□□□ 0.86
HNF4A-203ENST00000372920 TAB2Q9NYJ8 693 aa20.43■□□□□ 0.86
HNF4A-203ENST00000372920 MYO1AQ9UBC5 1043 aa20.43■□□□□ 0.86
HNF4A-203ENST00000372920 V9GY48 417 aaPredicted RBP20.43■□□□□ 0.86
HNF4A-203ENST00000372920 RTL9Q8NET4 1388 aa20.43■□□□□ 0.86
HNF4A-203ENST00000372920 MINDY4BA8MYZ0 360 aa20.43■□□□□ 0.86
HNF4A-203ENST00000372920 BMP15O95972 392 aa20.43■□□□□ 0.86
HNF4A-203ENST00000372920 SMIM22K7EJ46 135 aa20.43■□□□□ 0.86
HNF4A-203ENST00000372920 COPB1P53618 953 aaKnown RBP20.43■□□□□ 0.86
HNF4A-203ENST00000372920 IQUBQ8NA54 791 aa20.43■□□□□ 0.86
HNF4A-203ENST00000372920 AMPD2Q01433 879 aa20.42■□□□□ 0.86
HNF4A-203ENST00000372920 PPP2R5BQ15173 497 aa20.42■□□□□ 0.86
HNF4A-203ENST00000372920 MYO6Q9UM54 1294 aa20.42■□□□□ 0.86
HNF4A-203ENST00000372920 PRPF3O43395 683 aaKnown RBP20.42■□□□□ 0.86
HNF4A-203ENST00000372920 PLEKHA8P1O95397 391 aa20.42■□□□□ 0.86
HNF4A-203ENST00000372920 BCAMP50895 628 aa20.42■□□□□ 0.86
HNF4A-203ENST00000372920 TTC38Q5R3I4 469 aa20.42■□□□□ 0.86
HNF4A-203ENST00000372920 NCAPH2Q6IBW4 605 aa20.42■□□□□ 0.86
HNF4A-203ENST00000372920 ESR2Q92731 530 aa20.42■□□□□ 0.86
HNF4A-203ENST00000372920 GBP3Q9H0R5 595 aa20.42■□□□□ 0.86
HNF4A-203ENST00000372920 RWDD2AQ9UIY3 292 aa20.42■□□□□ 0.86
HNF4A-203ENST00000372920 SHANK3Q9BYB0 1731 aa20.42■□□□□ 0.86
HNF4A-203ENST00000372920 TOGARAM1Q9Y4F4 1720 aa20.42■□□□□ 0.86
HNF4A-203ENST00000372920 PTGDRQ13258 359 aa20.42■□□□□ 0.86
HNF4A-203ENST00000372920 E2F4Q16254 413 aa20.42■□□□□ 0.86
HNF4A-203ENST00000372920 SDR42E1Q8WUS8 393 aa20.42■□□□□ 0.86
HNF4A-203ENST00000372920 TRIM34Q9BYJ4 488 aa20.42■□□□□ 0.86
HNF4A-203ENST00000372920 DCCP43146 1447 aa20.41■□□□□ 0.86
HNF4A-203ENST00000372920 MYO1CO00159 1063 aa20.41■□□□□ 0.86
HNF4A-203ENST00000372920 KRT9P35527 623 aa20.41■□□□□ 0.86
HNF4A-203ENST00000372920 LEKR1Q6ZMV7 388 aa20.41■□□□□ 0.86
HNF4A-203ENST00000372920 CADPS2Q86UW7 1296 aa20.41■□□□□ 0.86
HNF4A-203ENST00000372920 ENAHQ8N8S7 591 aaPredicted RBP20.41■□□□□ 0.86
HNF4A-203ENST00000372920 DOCK2Q92608 1830 aa20.41■□□□□ 0.86
HNF4A-203ENST00000372920 TCP11X2Q5H9J9 407 aa20.41■□□□□ 0.86
HNF4A-203ENST00000372920 TNFRSF25Q93038 417 aa20.41■□□□□ 0.86
HNF4A-203ENST00000372920 LRP2BPQ9P2M1 347 aa20.41■□□□□ 0.86
HNF4A-203ENST00000372920 MYH3P11055 1940 aa20.4■□□□□ 0.86
HNF4A-203ENST00000372920 KCNJ18B7U540 433 aa20.4■□□□□ 0.86
HNF4A-203ENST00000372920 ATP2C1P98194 919 aaPredicted RBP20.4■□□□□ 0.86
HNF4A-203ENST00000372920 SPAG1Q07617 926 aa20.4■□□□□ 0.86
HNF4A-203ENST00000372920 PAK1Q13153 545 aa20.4■□□□□ 0.86
HNF4A-203ENST00000372920 KCNJ12Q14500 433 aa20.4■□□□□ 0.86
HNF4A-203ENST00000372920 CCDC102AQ96A19 550 aa20.4■□□□□ 0.86
HNF4A-203ENST00000372920 MTRQ99707 1265 aa20.4■□□□□ 0.86
HNF4A-203ENST00000372920 LRP5O75197 1615 aa20.4■□□□□ 0.86
HNF4A-203ENST00000372920 TRIM66O15016 1216 aa20.4■□□□□ 0.86
HNF4A-203ENST00000372920 TRIM14Q14142 442 aa20.4■□□□□ 0.86
HNF4A-203ENST00000372920 NPY5RQ15761 445 aa20.4■□□□□ 0.86
HNF4A-203ENST00000372920 PDXDC2PQ6P474 469 aa20.4■□□□□ 0.86
HNF4A-203ENST00000372920 CHP1Q99653 195 aa20.4■□□□□ 0.86
HNF4A-203ENST00000372920 BRMS1Q9HCU9 246 aa20.4■□□□□ 0.86
HNF4A-203ENST00000372920 TRIM10Q9UDY6 481 aa20.4■□□□□ 0.86
HNF4A-203ENST00000372920 ADGRA1Q86SQ6 560 aa20.4■□□□□ 0.86
HNF4A-203ENST00000372920 NELFBQ8WX92 580 aa20.4■□□□□ 0.86
HNF4A-203ENST00000372920 ZSCAN10Q96SZ4 725 aaPredicted RBP20.4■□□□□ 0.86
HNF4A-203ENST00000372920 ZBTB1Q9Y2K1 713 aa20.4■□□□□ 0.86
HNF4A-203ENST00000372920 REXO2Q9Y3B8 237 aaKnown RBP20.4■□□□□ 0.86
HNF4A-203ENST00000372920 ARAP2Q8WZ64 1704 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms