RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 DPYDQ12882 1025 aa18.98■□□□□ 0.63
PCIF1-201ENST00000372409 MARCH10Q8NA82 808 aaPredicted RBP18.98■□□□□ 0.63
PCIF1-201ENST00000372409 CELF1Q92879 486 aaKnown RBP18.98■□□□□ 0.63
PCIF1-201ENST00000372409 LZTFL1Q9NQ48 299 aa18.98■□□□□ 0.63
PCIF1-201ENST00000372409 BSDC1Q9NW68 430 aaPredicted RBP18.98■□□□□ 0.63
PCIF1-201ENST00000372409 CTNND2Q9UQB3 1225 aa18.98■□□□□ 0.63
PCIF1-201ENST00000372409 KLRK1P26718 216 aa18.98■□□□□ 0.63
PCIF1-201ENST00000372409 MCM7P33993 719 aa18.98■□□□□ 0.63
PCIF1-201ENST00000372409 CUL4BQ13620 913 aa18.98■□□□□ 0.63
PCIF1-201ENST00000372409 SH3RF1Q7Z6J0 888 aa18.98■□□□□ 0.63
PCIF1-201ENST00000372409 GSDMAQ96QA5 445 aa18.98■□□□□ 0.63
PCIF1-201ENST00000372409 DDAH1O94760 285 aa18.97■□□□□ 0.63
PCIF1-201ENST00000372409 CCDC175P0C221 793 aa18.97■□□□□ 0.63
PCIF1-201ENST00000372409 KCNQ4P56696 695 aa18.97■□□□□ 0.63
PCIF1-201ENST00000372409 FILIP1LQ4L180 1135 aa18.97■□□□□ 0.63
PCIF1-201ENST00000372409 TEX35Q5T0J7 233 aa18.97■□□□□ 0.63
PCIF1-201ENST00000372409 SMIM5Q71RC9 77 aa18.97■□□□□ 0.63
PCIF1-201ENST00000372409 CCDC12Q8WUD4 166 aaPredicted RBP18.97■□□□□ 0.63
PCIF1-201ENST00000372409 IRX2Q9BZI1 471 aaPredicted RBP18.97■□□□□ 0.63
PCIF1-201ENST00000372409 FAM53CQ9NYF3 392 aa18.97■□□□□ 0.63
PCIF1-201ENST00000372409 TFCP2L1Q9NZI6 479 aa18.97■□□□□ 0.63
PCIF1-201ENST00000372409 JAG2Q9Y219 1238 aa18.97■□□□□ 0.63
PCIF1-201ENST00000372409 CNTNAP5Q8WYK1 1306 aa18.97■□□□□ 0.63
PCIF1-201ENST00000372409 CACNA1SQ13698 1873 aa18.97■□□□□ 0.63
PCIF1-201ENST00000372409 CCT6AP40227 531 aaKnown RBP18.97■□□□□ 0.63
PCIF1-201ENST00000372409 MECOMQ03112 1051 aa18.97■□□□□ 0.63
PCIF1-201ENST00000372409 PPP2R3AQ06190 1150 aa18.97■□□□□ 0.63
PCIF1-201ENST00000372409 MRPL44Q9H9J2 332 aaKnown RBP18.97■□□□□ 0.63
PCIF1-201ENST00000372409 CYP2D6P10635 497 aa18.96■□□□□ 0.63
PCIF1-201ENST00000372409 NPY5RQ15761 445 aa18.96■□□□□ 0.63
PCIF1-201ENST00000372409 APTXQ7Z2E3 356 aaKnown RBP18.96■□□□□ 0.63
PCIF1-201ENST00000372409 TNFRSF25Q93038 417 aa18.96■□□□□ 0.63
PCIF1-201ENST00000372409 FHOD1Q9Y613 1164 aa18.96■□□□□ 0.63
PCIF1-201ENST00000372409 PPP1R3GB7ZBB8 358 aa18.96■□□□□ 0.63
PCIF1-201ENST00000372409 PNMA6AP0CW24 399 aaPredicted RBP18.96■□□□□ 0.63
PCIF1-201ENST00000372409 TERF2Q15554 542 aa18.96■□□□□ 0.63
PCIF1-201ENST00000372409 NSUN4Q96CB9 384 aaKnown RBP18.96■□□□□ 0.63
PCIF1-201ENST00000372409 PANX2Q96RD6 677 aa18.96■□□□□ 0.63
PCIF1-201ENST00000372409 ADD3Q9UEY8 706 aaKnown RBP18.96■□□□□ 0.63
PCIF1-201ENST00000372409 TSPY2A6NKD2 308 aa18.95■□□□□ 0.62
PCIF1-201ENST00000372409 KCNQ2O43526 872 aa18.95■□□□□ 0.62
PCIF1-201ENST00000372409 VEGFAP15692 232 aaPredicted RBP18.95■□□□□ 0.62
PCIF1-201ENST00000372409 MAP3K9P80192 1104 aa18.95■□□□□ 0.62
PCIF1-201ENST00000372409 ATP2C1P98194 919 aaPredicted RBP18.95■□□□□ 0.62
PCIF1-201ENST00000372409 RRAGBQ5VZM2 374 aa18.95■□□□□ 0.62
PCIF1-201ENST00000372409 CTAGE1Q96RT6 745 aa18.95■□□□□ 0.62
PCIF1-201ENST00000372409 CDCA7Q9BWT1 371 aaPredicted RBP18.95■□□□□ 0.62
PCIF1-201ENST00000372409 CRNKL1Q9BZJ0 848 aaKnown RBP18.95■□□□□ 0.62
PCIF1-201ENST00000372409 SEC31AO94979 1220 aaKnown RBP18.95■□□□□ 0.62
PCIF1-201ENST00000372409 SCG2P13521 617 aa18.95■□□□□ 0.62
PCIF1-201ENST00000372409 RAD9BQ6WBX8 426 aa18.95■□□□□ 0.62
PCIF1-201ENST00000372409 IQUBQ8NA54 791 aa18.95■□□□□ 0.62
PCIF1-201ENST00000372409 DCP1AQ9NPI6 582 aaPredicted RBP18.95■□□□□ 0.62
PCIF1-201ENST00000372409 MRFAP1Q9Y605 127 aa18.95■□□□□ 0.62
PCIF1-201ENST00000372409 XDHP47989 1333 aa18.95■□□□□ 0.62
PCIF1-201ENST00000372409 PCP11498 1178 aaKnown RBP18.94■□□□□ 0.62
PCIF1-201ENST00000372409 CASP14P31944 242 aa18.94■□□□□ 0.62
PCIF1-201ENST00000372409 SF3B3Q15393 1217 aaKnown RBP18.94■□□□□ 0.62
PCIF1-201ENST00000372409 CDKAL1Q5VV42 579 aa18.94■□□□□ 0.62
PCIF1-201ENST00000372409 KIFC2Q96AC6 838 aa18.94■□□□□ 0.62
PCIF1-201ENST00000372409 SPATA31A1Q5TZJ5 1347 aa18.94■□□□□ 0.62
PCIF1-201ENST00000372409 ADAMTS3O15072 1205 aa18.94■□□□□ 0.62
PCIF1-201ENST00000372409 TPM1P09493 284 aa18.94■□□□□ 0.62
PCIF1-201ENST00000372409 PRDX5P30044 214 aa18.94■□□□□ 0.62
PCIF1-201ENST00000372409 CT47A1Q5JQC4 288 aaPredicted RBP18.94■□□□□ 0.62
PCIF1-201ENST00000372409 CCDC24Q8N4L8 307 aa18.94■□□□□ 0.62
PCIF1-201ENST00000372409 ZSWIM4Q9H7M6 989 aa18.94■□□□□ 0.62
PCIF1-201ENST00000372409 MYH13Q9UKX3 1938 aa18.94■□□□□ 0.62
PCIF1-201ENST00000372409 A0A0U1RQJ8 604 aa18.94■□□□□ 0.62
PCIF1-201ENST00000372409 FGRP09769 529 aa18.94■□□□□ 0.62
PCIF1-201ENST00000372409 CDC25AP30304 524 aa18.94■□□□□ 0.62
PCIF1-201ENST00000372409 ATRIPQ8WXE1 791 aa18.94■□□□□ 0.62
PCIF1-201ENST00000372409 MAPK8IP1Q9UQF2 711 aa18.94■□□□□ 0.62
PCIF1-201ENST00000372409 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.94■□□□□ 0.62
PCIF1-201ENST00000372409 LAMB2P55268 1798 aa18.94■□□□□ 0.62
PCIF1-201ENST00000372409 VPS16Q9H269 839 aa18.93■□□□□ 0.62
PCIF1-201ENST00000372409 N4BP3O15049 544 aa18.93■□□□□ 0.62
PCIF1-201ENST00000372409 CLEC4GQ6UXB4 293 aa18.93■□□□□ 0.62
PCIF1-201ENST00000372409 MTMR7Q9Y216 660 aa18.93■□□□□ 0.62
PCIF1-201ENST00000372409 ADGRG1Q9Y653 693 aa18.93■□□□□ 0.62
PCIF1-201ENST00000372409 COL16A1Q07092 1604 aaPredicted RBP18.92■□□□□ 0.62
PCIF1-201ENST00000372409 MFAP3LO75121 409 aa18.92■□□□□ 0.62
PCIF1-201ENST00000372409 ORC4O43929 436 aa18.92■□□□□ 0.62
PCIF1-201ENST00000372409 HIBADHP31937 336 aaKnown RBP18.92■□□□□ 0.62
PCIF1-201ENST00000372409 IL17AQ16552 155 aa18.92■□□□□ 0.62
PCIF1-201ENST00000372409 FBXO33Q7Z6M2 555 aa18.92■□□□□ 0.62
PCIF1-201ENST00000372409 GPKOWQ92917 476 aaPredicted RBP eCLIP18.92■□□□□ 0.62
PCIF1-201ENST00000372409 NAA15Q9BXJ9 866 aaKnown RBP18.92■□□□□ 0.62
PCIF1-201ENST00000372409 MCM9Q9NXL9 1143 aa18.92■□□□□ 0.62
PCIF1-201ENST00000372409 WNK3Q9BYP7 1800 aa18.91■□□□□ 0.62
PCIF1-201ENST00000372409 ZRANB2O95218 330 aaKnown RBP eCLIP18.91■□□□□ 0.62
PCIF1-201ENST00000372409 PBX1P40424 430 aa18.91■□□□□ 0.62
PCIF1-201ENST00000372409 FXR1P51114 621 aaKnown RBP eCLIP18.91■□□□□ 0.62
PCIF1-201ENST00000372409 E2F4Q16254 413 aa18.91■□□□□ 0.62
PCIF1-201ENST00000372409 PFKFB3Q16875 520 aaPredicted RBP18.91■□□□□ 0.62
PCIF1-201ENST00000372409 KIF5CO60282 957 aa18.91■□□□□ 0.62
PCIF1-201ENST00000372409 GYPCP04921 128 aa18.91■□□□□ 0.62
PCIF1-201ENST00000372409 RPS8P62241 208 aaKnown RBP18.91■□□□□ 0.62
PCIF1-201ENST00000372409 KRT31Q15323 416 aa18.91■□□□□ 0.62
PCIF1-201ENST00000372409 TBC1D9BQ66K14 1250 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms