RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 MAP3K4Q9Y6R4 1608 aa10.9□□□□□ -0.67
COL4A6-202ENST00000372216 CLRN2A0PK11 232 aa10.9□□□□□ -0.67
COL4A6-202ENST00000372216 DTNBO60941 627 aa10.9□□□□□ -0.67
COL4A6-202ENST00000372216 SEC62Q99442 399 aaKnown RBP10.9□□□□□ -0.67
COL4A6-202ENST00000372216 ABCF3Q9NUQ8 709 aa10.9□□□□□ -0.67
COL4A6-202ENST00000372216 CDC42BPGQ6DT37 1551 aa10.9□□□□□ -0.67
COL4A6-202ENST00000372216 CLASP1Q7Z460 1538 aa10.89□□□□□ -0.67
COL4A6-202ENST00000372216 SYNJ2BP-COX16A0A087WUM0 186 aa10.89□□□□□ -0.67
COL4A6-202ENST00000372216 REXO1Q8N1G1 1221 aaKnown RBP10.89□□□□□ -0.67
COL4A6-202ENST00000372216 LEO1Q8WVC0 666 aaPredicted RBP10.89□□□□□ -0.67
COL4A6-202ENST00000372216 MLXIPQ9HAP2 919 aa10.89□□□□□ -0.67
COL4A6-202ENST00000372216 COX16Q9P0S2 106 aa10.89□□□□□ -0.67
COL4A6-202ENST00000372216 GCNT3O95395 438 aa10.89□□□□□ -0.67
COL4A6-202ENST00000372216 PABPC4Q13310 644 aaKnown RBP eCLIP10.89□□□□□ -0.67
COL4A6-202ENST00000372216 MIER3Q7Z3K6 550 aa10.89□□□□□ -0.67
COL4A6-202ENST00000372216 TPH2Q8IWU9 490 aa10.89□□□□□ -0.67
COL4A6-202ENST00000372216 ZNF654Q8IZM8 581 aa10.89□□□□□ -0.67
COL4A6-202ENST00000372216 APOL6Q9BWW8 343 aa10.89□□□□□ -0.67
COL4A6-202ENST00000372216 PRAMEF22A3QJZ6 481 aa10.89□□□□□ -0.67
COL4A6-202ENST00000372216 TNFAIP3P21580 790 aa10.89□□□□□ -0.67
COL4A6-202ENST00000372216 MYL5Q02045 173 aa10.89□□□□□ -0.67
COL4A6-202ENST00000372216 FMNL3Q8IVF7 1028 aa10.89□□□□□ -0.67
COL4A6-202ENST00000372216 RPUSD2Q8IZ73 545 aaKnown RBP10.89□□□□□ -0.67
COL4A6-202ENST00000372216 PRPF31Q8WWY3 499 aaKnown RBP10.89□□□□□ -0.67
COL4A6-202ENST00000372216 PUS3Q9BZE2 481 aaKnown RBP10.89□□□□□ -0.67
COL4A6-202ENST00000372216 GLG1Q92896 1179 aa10.89□□□□□ -0.67
COL4A6-202ENST00000372216 PLEKHF1Q96S99 279 aa10.89□□□□□ -0.67
COL4A6-202ENST00000372216 TSGA10Q9BZW7 698 aa10.89□□□□□ -0.67
COL4A6-202ENST00000372216 MRPL44Q9H9J2 332 aaKnown RBP10.89□□□□□ -0.67
COL4A6-202ENST00000372216 SPC25Q9HBM1 224 aa10.89□□□□□ -0.67
COL4A6-202ENST00000372216 IGSF1Q8N6C5 1336 aa10.89□□□□□ -0.67
COL4A6-202ENST00000372216 ADORA1P30542 326 aa10.89□□□□□ -0.67
COL4A6-202ENST00000372216 GNL1P36915 607 aaPredicted RBP10.89□□□□□ -0.67
COL4A6-202ENST00000372216 ICA1Q05084 483 aa10.89□□□□□ -0.67
COL4A6-202ENST00000372216 SEPT14Q6ZU15 432 aa10.89□□□□□ -0.67
COL4A6-202ENST00000372216 SSH3Q8TE77 659 aa10.89□□□□□ -0.67
COL4A6-202ENST00000372216 FAM204AQ9H8W3 233 aa10.89□□□□□ -0.67
COL4A6-202ENST00000372216 LEMD3Q9Y2U8 911 aa10.89□□□□□ -0.67
COL4A6-202ENST00000372216 HSPA1LP34931 641 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 PPFIA1Q13136 1202 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 UTP14CQ5TAP6 766 aaKnown RBP10.88□□□□□ -0.67
COL4A6-202ENST00000372216 UBLCP1Q8WVY7 318 aaPredicted RBP10.88□□□□□ -0.67
COL4A6-202ENST00000372216 VPS16Q9H269 839 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 DBNDD1Q9H9R9 158 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 LZTFL1Q9NQ48 299 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.88□□□□□ -0.67
COL4A6-202ENST00000372216 THRAP3Q9Y2W1 955 aaKnown RBP10.88□□□□□ -0.67
COL4A6-202ENST00000372216 V9GYY5 206 aaPredicted RBP10.88□□□□□ -0.67
COL4A6-202ENST00000372216 SYNRGQ9UMZ2 1314 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 GAS7O60861 476 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 GMNNO75496 209 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 POLR2MP0CAP2 368 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 MAN1A1P33908 653 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 GNPTABQ3T906 1256 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 CCDC14Q49A88 953 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 CASC4Q6P4E1 433 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 PLEKHA4Q9H4M7 779 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 A0A0D9SFI3 127 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 GOLGA8HP0CJ92 632 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 PHKA1P46020 1223 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 FOXD4Q12950 439 aaPredicted RBP10.88□□□□□ -0.67
COL4A6-202ENST00000372216 ASIC2Q16515 512 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 SEPT10Q9P0V9 454 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 ABCC3O15438 1527 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 JAK2O60674 1132 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 PRPF6O94906 941 aaKnown RBP10.88□□□□□ -0.67
COL4A6-202ENST00000372216 LRMPQ12912 555 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 ABCB5Q2M3G0 1257 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 OTUD6AQ7L8S5 288 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 SKA2Q8WVK7 121 aaPredicted RBP10.88□□□□□ -0.67
COL4A6-202ENST00000372216 EAF2Q96CJ1 260 aaPredicted RBP10.88□□□□□ -0.67
COL4A6-202ENST00000372216 TRPC6Q9Y210 931 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 MRPL11Q9Y3B7 192 aaKnown RBP10.88□□□□□ -0.67
COL4A6-202ENST00000372216 BZW2Q9Y6E2 419 aaKnown RBP10.88□□□□□ -0.67
COL4A6-202ENST00000372216 ATP2A1O14983 1001 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 PAK1Q13153 545 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 HERC4Q5GLZ8 1057 aaPredicted RBP10.88□□□□□ -0.67
COL4A6-202ENST00000372216 CSGALNACT2Q8N6G5 542 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 PSTPIP2Q9H939 334 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 SEC31BQ9NQW1 1179 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 ATP8A2Q9NTI2 1148 aa10.88□□□□□ -0.67
COL4A6-202ENST00000372216 ZNF569Q5MCW4 686 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 FAM102BQ5T8I3 360 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 SEL1L2Q5TEA6 688 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 BRINP3Q76B58 766 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.87□□□□□ -0.67
COL4A6-202ENST00000372216 CETN3O15182 167 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 DAAM2Q86T65 1068 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 NELFCDQ8IXH7 590 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 SMC6Q96SB8 1091 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 AKR1B15C9JRZ8 316 aaPredicted RBP10.87□□□□□ -0.67
COL4A6-202ENST00000372216 FLOT1O75955 427 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 HSPA4P34932 840 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 TBC1D8BQ0IIM8 1120 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 ATRIPQ8WXE1 791 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 CIAO1O76071 339 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 CDC37L1Q7L3B6 337 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 FAM193BQ96PV7 902 aaPredicted RBP10.87□□□□□ -0.67
COL4A6-202ENST00000372216 PPP1R16BQ96T49 567 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 SRP68Q9UHB9 627 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms