RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 NYXQ9GZU5 481 aa10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 GINS2Q9Y248 185 aa10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 RGS12O14924 1447 aa10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 NWD2Q9ULI1 1742 aa10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 CUTAO60888 179 aa10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 KRT13P13646 458 aa10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 GNA11P29992 359 aa10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 MRPS25P82663 173 aaKnown RBP10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 MAP9Q49MG5 647 aa10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 MYRIPQ8NFW9 859 aa10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 MRRFQ96E11 262 aaKnown RBP10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 GJA3Q9Y6H8 435 aa10.23□□□□□ -0.77
SMARCA1-202ENST00000371122 AATKQ6ZMQ8 1374 aa10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 SLC1A4P43007 532 aa10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 NCAPH2Q6IBW4 605 aa10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 CCDC94Q9BW85 323 aaPredicted RBP10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 LRWD1Q9UFC0 647 aa10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 GGA1Q9UJY5 639 aa10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 KRT86O43790 486 aa10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 KIF20AO95235 890 aa10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 BMP15O95972 392 aa10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 PCCAP05165 728 aaPredicted RBP10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 CTNNA2P26232 953 aa10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 UBXN2AP68543 259 aa10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 PARP10Q53GL7 1025 aa10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 FAM114A1Q8IWE2 563 aa10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 PNMA1Q8ND90 353 aa10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 NEK11Q8NG66 645 aa10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 GOLGA1Q92805 767 aa10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 PAIP2Q9BPZ3 127 aaKnown RBP10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 GOLGA6L9A6NEM1 432 aa10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 ERVV-2B6SEH9 535 aa10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 ZMYND10O75800 440 aa10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 MCAMP43121 646 aa10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 CYP4A11Q02928 519 aa10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 NLRP10Q86W26 655 aa10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 NELFBQ8WX92 580 aa10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 ZNF274Q96GC6 653 aaPredicted RBP10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 TTF2Q9UNY4 1162 aaKnown RBP10.22□□□□□ -0.77
SMARCA1-202ENST00000371122 SMCO2A6NFE2 343 aa10.21□□□□□ -0.77
SMARCA1-202ENST00000371122 TACC1O75410 805 aa10.21□□□□□ -0.77
SMARCA1-202ENST00000371122 USP17L8P0C7I0 530 aa10.21□□□□□ -0.77
SMARCA1-202ENST00000371122 SLC16A2P36021 539 aa10.21□□□□□ -0.77
SMARCA1-202ENST00000371122 RASGRF1Q13972 1273 aa10.21□□□□□ -0.77
SMARCA1-202ENST00000371122 TOB2Q14106 344 aaPredicted RBP10.21□□□□□ -0.77
SMARCA1-202ENST00000371122 POLA2Q14181 598 aa10.21□□□□□ -0.77
SMARCA1-202ENST00000371122 ERFEQ4G0M1 354 aa10.21□□□□□ -0.77
SMARCA1-202ENST00000371122 UTP14CQ5TAP6 766 aaKnown RBP10.21□□□□□ -0.77
SMARCA1-202ENST00000371122 MAP3K15Q6ZN16 1313 aa10.21□□□□□ -0.77
SMARCA1-202ENST00000371122 SV2BQ7L1I2 683 aa10.21□□□□□ -0.77
SMARCA1-202ENST00000371122 WNK3Q9BYP7 1800 aa10.21□□□□□ -0.77
SMARCA1-202ENST00000371122 SLC39A2Q9NP94 309 aa10.21□□□□□ -0.77
SMARCA1-202ENST00000371122 ENC1O14682 589 aa10.21□□□□□ -0.78
SMARCA1-202ENST00000371122 FAM13AO94988 1023 aa10.21□□□□□ -0.78
SMARCA1-202ENST00000371122 CCDC174Q6PII3 467 aa10.21□□□□□ -0.78
SMARCA1-202ENST00000371122 PAXIP1Q6ZW49 1069 aaPredicted RBP10.21□□□□□ -0.78
SMARCA1-202ENST00000371122 EPSTI1Q96J88 318 aa10.21□□□□□ -0.78
SMARCA1-202ENST00000371122 EYA3Q99504 573 aa10.21□□□□□ -0.78
SMARCA1-202ENST00000371122 CSRNP2Q9H175 543 aa10.21□□□□□ -0.78
SMARCA1-202ENST00000371122 SERPINA10Q9UK55 444 aa10.21□□□□□ -0.78
SMARCA1-202ENST00000371122 TNS3Q68CZ2 1445 aa10.21□□□□□ -0.78
SMARCA1-202ENST00000371122 GOLGA6L10A0A0M3HER8 536 aa10.21□□□□□ -0.78
SMARCA1-202ENST00000371122 SHTN1A0MZ66 631 aa10.21□□□□□ -0.78
SMARCA1-202ENST00000371122 NMT2O60551 498 aa10.21□□□□□ -0.78
SMARCA1-202ENST00000371122 PAK1Q13153 545 aa10.21□□□□□ -0.78
SMARCA1-202ENST00000371122 SUSD4Q5VX71 490 aa10.21□□□□□ -0.78
SMARCA1-202ENST00000371122 TYW1BQ6NUM6 668 aa10.21□□□□□ -0.78
SMARCA1-202ENST00000371122 ANKRD2Q9GZV1 360 aa10.21□□□□□ -0.78
SMARCA1-202ENST00000371122 LTN1O94822 1766 aa10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 KLRF2D3W0D1 207 aa10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 CACNB3P54284 484 aa10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 ADAT2Q7Z6V5 191 aaKnown RBP10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 LRRC8AQ8IWT6 810 aa10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 TXLNBQ8N3L3 684 aa10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 SAMSN1Q9NSI8 373 aaKnown RBP10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 PCDHB6Q9Y5E3 794 aa10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 RGPD1P0DJD0 1748 aa10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 PEAK1Q9H792 1746 aa10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 BACH1O14867 736 aa10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 CYP2D6P10635 497 aa10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 MYCLP12524 364 aaPredicted RBP10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 HPDP32754 393 aaPredicted RBP10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 CETN1Q12798 172 aa10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 LRRC41Q15345 812 aa10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 DPP8Q6V1X1 898 aaPredicted RBP10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 NSMFQ6X4W1 530 aa10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 C10orf67Q8IYJ2 551 aa10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 TTLL11Q8NHH1 800 aa10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 SYMPKQ92797 1274 aaKnown RBP10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 ZSCAN10Q96SZ4 725 aaPredicted RBP10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 PCDHB13Q9Y5F0 798 aa10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 PLCH1Q4KWH8 1693 aa10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 NBPF26B4DH59 902 aa10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 KCNQ2O43526 872 aa10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 PLCB3Q01970 1234 aa10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 NBPF14Q5TI25 921 aa10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 NBPF10Q6P3W6 841 aaKnown RBP10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 NBPF15Q8N660 670 aa10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 ERMNQ8TAM6 284 aa10.2□□□□□ -0.78
SMARCA1-202ENST00000371122 PARP3Q9Y6F1 533 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms