RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 TMTC1Q8IUR5 882 aa13.17□□□□□ -0.3
SMARCA1-201ENST00000371121 ZNF579Q8NAF0 562 aaKnown RBP13.17□□□□□ -0.3
SMARCA1-201ENST00000371121 FAM76AQ8TAV0 307 aa13.17□□□□□ -0.3
SMARCA1-201ENST00000371121 ZNF496Q96IT1 587 aaPredicted RBP13.17□□□□□ -0.3
SMARCA1-201ENST00000371121 GPR108Q9NPR9 543 aa13.17□□□□□ -0.3
SMARCA1-201ENST00000371121 SMARCAL1Q9NZC9 954 aa13.17□□□□□ -0.3
SMARCA1-201ENST00000371121 INHBEP58166 350 aa13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 PDCLQ13371 301 aa13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 IMMTQ16891 758 aaKnown RBP13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 NBPF14Q5TI25 921 aa13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 PPFIBP1Q86W92 1011 aa13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 JMYQ8N9B5 988 aa13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 PAGR1Q9BTK6 254 aa13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 LRRC1Q9BTT6 524 aa13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 NID2Q14112 1375 aa13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 H7C1W4 665 aa13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 ADAMTS3O15072 1205 aa13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 STAMQ92783 540 aa13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 TTYH3Q9C0H2 523 aa13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 EHD2Q9NZN4 543 aa13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 CAPN7Q9Y6W3 813 aa13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 GPAA1O43292 621 aa13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 TUBBP07437 444 aa13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 EPB41P11171 864 aaKnown RBP13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 CYP26C1Q6V0L0 522 aa13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 TICAM2Q86XR7 235 aa13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 CCDC51Q96ER9 411 aa13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 DNAJC7Q99615 494 aa13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 CARD10Q9BWT7 1032 aa13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 VPS16Q9H269 839 aa13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 TRPM3Q9HCF6 1732 aaPredicted RBP13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 HOOK1Q9UJC3 728 aaKnown RBP13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 SAR1BQ9Y6B6 198 aa13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 EPN1Q9Y6I3 576 aaPredicted RBP13.16□□□□□ -0.3
SMARCA1-201ENST00000371121 ATRNO75882 1429 aa13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 DOCK2Q92608 1830 aa13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 CCDC196A0A1B0GTZ2 297 aa13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 GOLGA6BA6NDN3 693 aa13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 EBAG9O00559 213 aa13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 ATP6V1AP38606 617 aa13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 AFMP43652 599 aa13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 PMS1P54277 932 aaKnown RBP13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 APBA1Q02410 837 aa13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 WLSQ5T9L3 541 aa13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 AMOTL1Q8IY63 956 aa13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 BANK1Q8NDB2 785 aa13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 B4E1Z4 1266 aa13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 INPP5BP32019 993 aa13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 ZAP70P43403 619 aa13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 FKBP4Q02790 459 aaKnown RBP eCLIP13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 CHADLQ6NUI6 762 aa13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 ZNF572Q7Z3I7 529 aaPredicted RBP13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 DIS3L2Q8IYB7 885 aaKnown RBP13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 ZNF507Q8TCN5 953 aa13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 JAKMIP2Q96AA8 810 aa13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 SEMA3EO15041 775 aa13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 FMNL1O95466 1100 aaPredicted RBP13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 KRT14P02533 472 aa13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 C6orf89Q6UWU4 347 aa13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 SMCR8Q8TEV9 937 aaPredicted RBP13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 VPS54Q9P1Q0 977 aa13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 CTNND2Q9UQB3 1225 aa13.15□□□□□ -0.3
SMARCA1-201ENST00000371121 ZNF233A6NK53 670 aa13.14□□□□□ -0.31
SMARCA1-201ENST00000371121 SLC7A5Q01650 507 aa13.14□□□□□ -0.31
SMARCA1-201ENST00000371121 CTDSPL2Q05D32 466 aa13.14□□□□□ -0.31
SMARCA1-201ENST00000371121 IL17AQ16552 155 aa13.14□□□□□ -0.31
SMARCA1-201ENST00000371121 SGMS1Q86VZ5 419 aa13.14□□□□□ -0.31
SMARCA1-201ENST00000371121 TAB2Q9NYJ8 693 aa13.14□□□□□ -0.31
SMARCA1-201ENST00000371121 FAM184BQ9ULE4 1060 aa13.14□□□□□ -0.31
SMARCA1-201ENST00000371121 KRT9P35527 623 aa13.14□□□□□ -0.31
SMARCA1-201ENST00000371121 KLK7P49862 253 aa13.14□□□□□ -0.31
SMARCA1-201ENST00000371121 TCP11X2Q5H9J9 407 aa13.14□□□□□ -0.31
SMARCA1-201ENST00000371121 ZNF662Q6ZS27 426 aa13.14□□□□□ -0.31
SMARCA1-201ENST00000371121 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.14□□□□□ -0.31
SMARCA1-201ENST00000371121 RNPC3Q96LT9 517 aaKnown RBP13.14□□□□□ -0.31
SMARCA1-201ENST00000371121 MEFVO15553 781 aaPredicted RBP13.14□□□□□ -0.31
SMARCA1-201ENST00000371121 COPB1P53618 953 aaKnown RBP13.14□□□□□ -0.31
SMARCA1-201ENST00000371121 NEXNQ0ZGT2 675 aa13.14□□□□□ -0.31
SMARCA1-201ENST00000371121 COL22A1Q8NFW1 1626 aaPredicted RBP13.14□□□□□ -0.31
SMARCA1-201ENST00000371121 ZNF213O14771 459 aa13.13□□□□□ -0.31
SMARCA1-201ENST00000371121 FAM153BP0C7A2 387 aa13.13□□□□□ -0.31
SMARCA1-201ENST00000371121 NAP1L1P55209 391 aaKnown RBP13.13□□□□□ -0.31
SMARCA1-201ENST00000371121 MEA1Q16626 185 aa13.13□□□□□ -0.31
SMARCA1-201ENST00000371121 FAM153CQ494X1 144 aa13.13□□□□□ -0.31
SMARCA1-201ENST00000371121 PREPLQ4J6C6 727 aaPredicted RBP13.13□□□□□ -0.31
SMARCA1-201ENST00000371121 SLC26A6Q9BXS9 759 aa13.13□□□□□ -0.31
SMARCA1-201ENST00000371121 AGPAT5Q9NUQ2 364 aa13.13□□□□□ -0.31
SMARCA1-201ENST00000371121 FAM153AQ9UHL3 310 aa13.13□□□□□ -0.31
SMARCA1-201ENST00000371121 CAPN6Q9Y6Q1 641 aa13.13□□□□□ -0.31
SMARCA1-201ENST00000371121 UBR2Q8IWV8 1755 aa13.13□□□□□ -0.31
SMARCA1-201ENST00000371121 NBPF26B4DH59 902 aa13.13□□□□□ -0.31
SMARCA1-201ENST00000371121 GUCY1A3Q02108 690 aa13.13□□□□□ -0.31
SMARCA1-201ENST00000371121 BYSLQ13895 437 aaKnown RBP13.13□□□□□ -0.31
SMARCA1-201ENST00000371121 NPY5RQ15761 445 aa13.13□□□□□ -0.31
SMARCA1-201ENST00000371121 EMC10Q5UCC4 262 aa13.13□□□□□ -0.31
SMARCA1-201ENST00000371121 NAA35Q5VZE5 725 aa13.13□□□□□ -0.31
SMARCA1-201ENST00000371121 NBPF10Q6P3W6 841 aaKnown RBP13.13□□□□□ -0.31
SMARCA1-201ENST00000371121 NBPF15Q8N660 670 aa13.13□□□□□ -0.31
SMARCA1-201ENST00000371121 SYMPKQ92797 1274 aaKnown RBP13.13□□□□□ -0.31
SMARCA1-201ENST00000371121 MIEF2Q96C03 454 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms