RNA–Protein interactions for RNA: ENST00000369705.3

ME1-201, Transcript of malic enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME1, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME1-201ENST00000369705 STRIP1Q5VSL9 837 aa12.17□□□□□ -0.46
ME1-201ENST00000369705 CC2D2BQ6DHV5 1058 aa12.17□□□□□ -0.46
ME1-201ENST00000369705 ZSCAN29Q8IWY8 852 aaPredicted RBP12.17□□□□□ -0.46
ME1-201ENST00000369705 RRP15Q9Y3B9 282 aaKnown RBP12.17□□□□□ -0.46
ME1-201ENST00000369705 CRKP46108 304 aa12.16□□□□□ -0.46
ME1-201ENST00000369705 KRT85P78386 507 aa12.16□□□□□ -0.46
ME1-201ENST00000369705 GNL2Q13823 731 aaKnown RBP12.16□□□□□ -0.46
ME1-201ENST00000369705 ARID5BQ14865 1188 aa12.16□□□□□ -0.46
ME1-201ENST00000369705 EGFL6Q8IUX8 553 aa12.16□□□□□ -0.46
ME1-201ENST00000369705 FANCBQ8NB91 859 aa12.16□□□□□ -0.46
ME1-201ENST00000369705 SUPT20HQ8NEM7 779 aa12.16□□□□□ -0.46
ME1-201ENST00000369705 FAM163AQ96GL9 167 aaPredicted RBP12.16□□□□□ -0.46
ME1-201ENST00000369705 MTFR1LQ9H019 292 aa12.16□□□□□ -0.46
ME1-201ENST00000369705 MKRN1Q9UHC7 482 aaKnown RBP12.16□□□□□ -0.46
ME1-201ENST00000369705 BCS1LQ9Y276 419 aa12.16□□□□□ -0.46
ME1-201ENST00000369705 NRXN2Q9P2S2 1712 aa12.16□□□□□ -0.46
ME1-201ENST00000369705 CCDC183Q5T5S1 534 aa12.16□□□□□ -0.46
ME1-201ENST00000369705 ALG1Q9BT22 464 aa12.16□□□□□ -0.46
ME1-201ENST00000369705 TRMT1Q9NXH9 659 aaKnown RBP12.16□□□□□ -0.46
ME1-201ENST00000369705 PNMA6AP0CW24 399 aaPredicted RBP12.16□□□□□ -0.46
ME1-201ENST00000369705 CLCN6P51797 869 aa12.16□□□□□ -0.46
ME1-201ENST00000369705 SSRP1Q08945 709 aaKnown RBP12.16□□□□□ -0.46
ME1-201ENST00000369705 FAM43BQ6ZT52 329 aaPredicted RBP12.16□□□□□ -0.46
ME1-201ENST00000369705 SRLQ86TD4 932 aa12.16□□□□□ -0.46
ME1-201ENST00000369705 RTKN2Q8IZC4 609 aa12.16□□□□□ -0.46
ME1-201ENST00000369705 CHD4Q14839 1912 aa12.16□□□□□ -0.46
ME1-201ENST00000369705 GOLGA6L4A6NEF3 574 aa12.15□□□□□ -0.46
ME1-201ENST00000369705 DACT2Q5SW24 774 aa12.15□□□□□ -0.46
ME1-201ENST00000369705 SUGT1Q9Y2Z0 365 aa12.15□□□□□ -0.46
ME1-201ENST00000369705 ZBTB12Q9Y330 459 aaPredicted RBP12.15□□□□□ -0.46
ME1-201ENST00000369705 GAKO14976 1311 aa12.15□□□□□ -0.46
ME1-201ENST00000369705 CCDC88AQ3V6T2 1871 aa12.15□□□□□ -0.46
ME1-201ENST00000369705 DUOX1Q9NRD9 1551 aa12.15□□□□□ -0.46
ME1-201ENST00000369705 IRF6O14896 467 aa12.15□□□□□ -0.46
ME1-201ENST00000369705 SEC31AO94979 1220 aaKnown RBP12.15□□□□□ -0.46
ME1-201ENST00000369705 PCP11498 1178 aaKnown RBP12.15□□□□□ -0.46
ME1-201ENST00000369705 NFIAQ12857 509 aa12.15□□□□□ -0.46
ME1-201ENST00000369705 SEC23AQ15436 765 aa12.15□□□□□ -0.46
ME1-201ENST00000369705 DALRD3Q5D0E6 543 aaKnown RBP12.15□□□□□ -0.46
ME1-201ENST00000369705 CDC42EP5Q6NZY7 148 aa12.15□□□□□ -0.46
ME1-201ENST00000369705 TRIM22Q8IYM9 498 aa12.15□□□□□ -0.46
ME1-201ENST00000369705 DDX4Q9NQI0 724 aaKnown RBP12.15□□□□□ -0.46
ME1-201ENST00000369705 FAM217BQ9NTX9 383 aaPredicted RBP12.15□□□□□ -0.46
ME1-201ENST00000369705 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.15□□□□□ -0.46
ME1-201ENST00000369705 PAXBP1Q9Y5B6 917 aa12.15□□□□□ -0.46
ME1-201ENST00000369705 RGPD3A6NKT7 1758 aaPredicted RBP12.15□□□□□ -0.47
ME1-201ENST00000369705 RGPD4Q7Z3J3 1758 aa12.15□□□□□ -0.47
ME1-201ENST00000369705 CCDC196A0A1B0GTZ2 297 aa12.15□□□□□ -0.47
ME1-201ENST00000369705 YDJCA8MPS7 323 aa12.15□□□□□ -0.47
ME1-201ENST00000369705 ORC4O43929 436 aa12.15□□□□□ -0.47
ME1-201ENST00000369705 SLURP2P0DP57 97 aa12.15□□□□□ -0.47
ME1-201ENST00000369705 AKAP17AQ02040 695 aaKnown RBP12.15□□□□□ -0.47
ME1-201ENST00000369705 TRIM29Q14134 588 aa12.15□□□□□ -0.47
ME1-201ENST00000369705 MUM1L1Q5H9M0 696 aa12.15□□□□□ -0.47
ME1-201ENST00000369705 LUZP1Q86V48 1076 aa12.15□□□□□ -0.47
ME1-201ENST00000369705 SPATA32Q96LK8 384 aa12.15□□□□□ -0.47
ME1-201ENST00000369705 MYH2Q9UKX2 1941 aa12.15□□□□□ -0.47
ME1-201ENST00000369705 CDK8P49336 464 aa12.14□□□□□ -0.47
ME1-201ENST00000369705 APOBEC3HQ6NTF7 200 aaKnown RBP12.14□□□□□ -0.47
ME1-201ENST00000369705 FTOQ9C0B1 505 aaKnown RBP eCLIP12.14□□□□□ -0.47
ME1-201ENST00000369705 KAT14Q9H8E8 782 aa12.14□□□□□ -0.47
ME1-201ENST00000369705 ZNF287Q9HBT7 754 aa12.14□□□□□ -0.47
ME1-201ENST00000369705 TXLNBQ8N3L3 684 aa12.14□□□□□ -0.47
ME1-201ENST00000369705 ZSCAN16Q9H4T2 348 aaPredicted RBP12.14□□□□□ -0.47
ME1-201ENST00000369705 CXorf56Q9H5V9 222 aa12.14□□□□□ -0.47
ME1-201ENST00000369705 WDHD1O75717 1129 aaPredicted RBP12.13□□□□□ -0.47
ME1-201ENST00000369705 FGRP09769 529 aa12.13□□□□□ -0.47
ME1-201ENST00000369705 GUCY1A2P33402 732 aa12.13□□□□□ -0.47
ME1-201ENST00000369705 TTC31Q49AM3 519 aaPredicted RBP12.13□□□□□ -0.47
ME1-201ENST00000369705 FOXR1Q6PIV2 292 aa12.13□□□□□ -0.47
ME1-201ENST00000369705 FBXO18Q8NFZ0 1043 aa12.13□□□□□ -0.47
ME1-201ENST00000369705 CACTINQ8WUQ7 758 aaKnown RBP12.13□□□□□ -0.47
ME1-201ENST00000369705 C10orf71Q711Q0 1435 aa12.13□□□□□ -0.47
ME1-201ENST00000369705 EIF6P56537 245 aaKnown RBP12.13□□□□□ -0.47
ME1-201ENST00000369705 NTRK3Q16288 839 aa12.13□□□□□ -0.47
ME1-201ENST00000369705 TTC6Q86TZ1 520 aa12.13□□□□□ -0.47
ME1-201ENST00000369705 CTCFLQ8NI51 663 aaPredicted RBP12.13□□□□□ -0.47
ME1-201ENST00000369705 UPF1Q92900 1129 aaKnown RBP eCLIP12.13□□□□□ -0.47
ME1-201ENST00000369705 TDRD3Q9H7E2 651 aaKnown RBP12.13□□□□□ -0.47
ME1-201ENST00000369705 SUFUQ9UMX1 484 aa12.13□□□□□ -0.47
ME1-201ENST00000369705 ATP2B2Q01814 1243 aa12.13□□□□□ -0.47
ME1-201ENST00000369705 RESTQ13127 1097 aa12.13□□□□□ -0.47
ME1-201ENST00000369705 CCDC144BQ3MJ40 725 aa12.13□□□□□ -0.47
ME1-201ENST00000369705 HHIPL2Q6UWX4 724 aa12.13□□□□□ -0.47
ME1-201ENST00000369705 ZFPM1Q8IX07 1006 aa12.13□□□□□ -0.47
ME1-201ENST00000369705 IL17RBQ9NRM6 502 aa12.13□□□□□ -0.47
ME1-201ENST00000369705 TCHHQ07283 1943 aa12.12□□□□□ -0.47
ME1-201ENST00000369705 FAM196BA6NMK8 535 aa12.12□□□□□ -0.47
ME1-201ENST00000369705 MPHOSPH10O00566 681 aaKnown RBP12.12□□□□□ -0.47
ME1-201ENST00000369705 RAD21O60216 631 aa12.12□□□□□ -0.47
ME1-201ENST00000369705 PLEKHA8P1O95397 391 aa12.12□□□□□ -0.47
ME1-201ENST00000369705 TGFB2P61812 414 aa12.12□□□□□ -0.47
ME1-201ENST00000369705 CRACR2BQ8N4Y2 399 aaPredicted RBP12.12□□□□□ -0.47
ME1-201ENST00000369705 OGFOD1Q8N543 542 aa12.12□□□□□ -0.47
ME1-201ENST00000369705 CCDC34Q96HJ3 373 aa12.12□□□□□ -0.47
ME1-201ENST00000369705 V9GY48 417 aaPredicted RBP12.12□□□□□ -0.47
ME1-201ENST00000369705 BAZ2BQ9UIF8 2168 aaKnown RBP12.12□□□□□ -0.47
ME1-201ENST00000369705 PSMD14O00487 310 aa12.12□□□□□ -0.47
ME1-201ENST00000369705 ATP2B1P20020 1258 aa12.12□□□□□ -0.47
ME1-201ENST00000369705 CFAP100Q494V2 611 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms