RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 FLRT1Q9NZU1 646 aa19.34■□□□□ 0.69
CKS1B-202ENST00000368436 STAP2Q9UGK3 403 aa19.34■□□□□ 0.69
CKS1B-202ENST00000368436 PARP14Q460N5 1801 aa19.34■□□□□ 0.69
CKS1B-202ENST00000368436 ZNF236Q9UL36 1845 aa19.33■□□□□ 0.69
CKS1B-202ENST00000368436 MBD4O95243 580 aa19.33■□□□□ 0.68
CKS1B-202ENST00000368436 COL6A1P12109 1028 aa19.33■□□□□ 0.68
CKS1B-202ENST00000368436 GRB14Q14449 540 aa19.33■□□□□ 0.68
CKS1B-202ENST00000368436 UBE3CQ15386 1083 aa19.33■□□□□ 0.68
CKS1B-202ENST00000368436 SIAH1Q8IUQ4 282 aa19.33■□□□□ 0.68
CKS1B-202ENST00000368436 C7orf61Q8IZ16 206 aa19.33■□□□□ 0.68
CKS1B-202ENST00000368436 DYNLL2Q96FJ2 89 aa19.33■□□□□ 0.68
CKS1B-202ENST00000368436 PFASO15067 1338 aa19.32■□□□□ 0.68
CKS1B-202ENST00000368436 IGHA2P01877 340 aa19.32■□□□□ 0.68
CKS1B-202ENST00000368436 BMP8BP34820 402 aa19.32■□□□□ 0.68
CKS1B-202ENST00000368436 KIAA1755Q5JYT7 1200 aa19.32■□□□□ 0.68
CKS1B-202ENST00000368436 C12orf60Q5U649 245 aa19.32■□□□□ 0.68
CKS1B-202ENST00000368436 WDR78Q5VTH9 848 aa19.32■□□□□ 0.68
CKS1B-202ENST00000368436 GDF15Q99988 308 aa19.32■□□□□ 0.68
CKS1B-202ENST00000368436 LRRCC1Q9C099 1032 aa19.32■□□□□ 0.68
CKS1B-202ENST00000368436 SZT2Q5T011 3432 aa19.32■□□□□ 0.68
CKS1B-202ENST00000368436 CHGBP05060 677 aa19.31■□□□□ 0.68
CKS1B-202ENST00000368436 AKR1B1P15121 316 aa19.31■□□□□ 0.68
CKS1B-202ENST00000368436 C20orf194Q5TEA3 1177 aa19.31■□□□□ 0.68
CKS1B-202ENST00000368436 MFSD14CQ5VZR4 134 aa19.31■□□□□ 0.68
CKS1B-202ENST00000368436 NPLOC4Q8TAT6 608 aa19.31■□□□□ 0.68
CKS1B-202ENST00000368436 LPAR1Q92633 364 aa19.31■□□□□ 0.68
CKS1B-202ENST00000368436 CCDC17Q96LX7 622 aa19.31■□□□□ 0.68
CKS1B-202ENST00000368436 TMX2Q9Y320 296 aa19.31■□□□□ 0.68
CKS1B-202ENST00000368436 IVNS1ABPQ9Y6Y0 642 aa19.31■□□□□ 0.68
CKS1B-202ENST00000368436 USP17L12C9JPN9 530 aa19.3■□□□□ 0.68
CKS1B-202ENST00000368436 USP17L21D6R901 530 aa19.3■□□□□ 0.68
CKS1B-202ENST00000368436 SMIM22K7EJ46 135 aa19.3■□□□□ 0.68
CKS1B-202ENST00000368436 CDK8P49336 464 aa19.3■□□□□ 0.68
CKS1B-202ENST00000368436 ZSCAN25Q6NSZ9 544 aa19.3■□□□□ 0.68
CKS1B-202ENST00000368436 SHCBP1Q8NEM2 672 aa19.3■□□□□ 0.68
CKS1B-202ENST00000368436 MOV10L1Q9BXT6 1211 aaKnown RBP19.3■□□□□ 0.68
CKS1B-202ENST00000368436 TANGO6Q9C0B7 1094 aa19.3■□□□□ 0.68
CKS1B-202ENST00000368436 ARHGEF10LQ9HCE6 1279 aa19.3■□□□□ 0.68
CKS1B-202ENST00000368436 CYP2D7A0A087X1C5 515 aa19.29■□□□□ 0.68
CKS1B-202ENST00000368436 STRNO43815 780 aa19.29■□□□□ 0.68
CKS1B-202ENST00000368436 SMARCA5O60264 1052 aaPredicted RBP19.29■□□□□ 0.68
CKS1B-202ENST00000368436 DSG3P32926 999 aa19.29■□□□□ 0.68
CKS1B-202ENST00000368436 ATP2B2Q01814 1243 aa19.29■□□□□ 0.68
CKS1B-202ENST00000368436 C16orf86Q6ZW13 317 aa19.29■□□□□ 0.68
CKS1B-202ENST00000368436 MB21D1Q8N884 522 aa19.29■□□□□ 0.68
CKS1B-202ENST00000368436 SPATC1LQ9H0A9 340 aa19.29■□□□□ 0.68
CKS1B-202ENST00000368436 ZMYND8Q9ULU4 1186 aaPredicted RBP19.29■□□□□ 0.68
CKS1B-202ENST00000368436 ZNFX1Q9P2E3 1918 aaKnown RBP19.29■□□□□ 0.68
CKS1B-202ENST00000368436 COL11A1P12107 1806 aaPredicted RBP19.28■□□□□ 0.68
CKS1B-202ENST00000368436 ICA1Q05084 483 aa19.28■□□□□ 0.68
CKS1B-202ENST00000368436 CLEC10AQ8IUN9 316 aa19.28■□□□□ 0.68
CKS1B-202ENST00000368436 AMOTL1Q8IY63 956 aa19.28■□□□□ 0.68
CKS1B-202ENST00000368436 PUS7LQ9H0K6 701 aaKnown RBP19.28■□□□□ 0.68
CKS1B-202ENST00000368436 SH2D4AQ9H788 454 aa19.28■□□□□ 0.68
CKS1B-202ENST00000368436 VCPKMTQ9H867 229 aa19.28■□□□□ 0.68
CKS1B-202ENST00000368436 SLC4A4Q9Y6R1 1079 aa19.28■□□□□ 0.68
CKS1B-202ENST00000368436 GREB1LQ9C091 1923 aaPredicted RBP19.27■□□□□ 0.68
CKS1B-202ENST00000368436 SOX1O00570 391 aaPredicted RBP19.27■□□□□ 0.68
CKS1B-202ENST00000368436 MSCO60682 206 aa19.27■□□□□ 0.68
CKS1B-202ENST00000368436 SYN1P17600 705 aa19.27■□□□□ 0.68
CKS1B-202ENST00000368436 CYP2C19P33261 490 aa19.27■□□□□ 0.68
CKS1B-202ENST00000368436 CTR9Q6PD62 1173 aa19.27■□□□□ 0.68
CKS1B-202ENST00000368436 DPP9Q86TI2 863 aa19.27■□□□□ 0.68
CKS1B-202ENST00000368436 DDRGK1Q96HY6 314 aa19.27■□□□□ 0.68
CKS1B-202ENST00000368436 ECHDC1Q9NTX5 307 aa19.27■□□□□ 0.68
CKS1B-202ENST00000368436 DDX20Q9UHI6 824 aaKnown RBP19.27■□□□□ 0.68
CKS1B-202ENST00000368436 WDR46O15213 610 aaKnown RBP19.26■□□□□ 0.67
CKS1B-202ENST00000368436 FLOT1O75955 427 aa19.26■□□□□ 0.67
CKS1B-202ENST00000368436 ERCC3P19447 782 aa19.26■□□□□ 0.67
CKS1B-202ENST00000368436 ADORA2AP29274 412 aa19.26■□□□□ 0.67
CKS1B-202ENST00000368436 OLFML2BQ68BL8 750 aa19.26■□□□□ 0.67
CKS1B-202ENST00000368436 SPICE1Q8N0Z3 855 aa19.26■□□□□ 0.67
CKS1B-202ENST00000368436 TRPV1Q8NER1 839 aa19.26■□□□□ 0.67
CKS1B-202ENST00000368436 MROH8Q9H579 483 aa19.26■□□□□ 0.67
CKS1B-202ENST00000368436 ADAMTS5Q9UNA0 930 aa19.26■□□□□ 0.67
CKS1B-202ENST00000368436 CYBAP13498 195 aa19.25■□□□□ 0.67
CKS1B-202ENST00000368436 EEF2P13639 858 aaKnown RBP19.25■□□□□ 0.67
CKS1B-202ENST00000368436 LRRC26Q2I0M4 334 aa19.25■□□□□ 0.67
CKS1B-202ENST00000368436 ABRAQ8N0Z2 381 aa19.25■□□□□ 0.67
CKS1B-202ENST00000368436 ATG4CQ96DT6 458 aa19.25■□□□□ 0.67
CKS1B-202ENST00000368436 STRBPQ96SI9 672 aaKnown RBP19.25■□□□□ 0.67
CKS1B-202ENST00000368436 DCTPP1Q9H773 170 aa19.25■□□□□ 0.67
CKS1B-202ENST00000368436 KANSL2Q9H9L4 492 aa19.25■□□□□ 0.67
CKS1B-202ENST00000368436 COBLO75128 1261 aa19.24■□□□□ 0.67
CKS1B-202ENST00000368436 CNGA1P29973 690 aa19.24■□□□□ 0.67
CKS1B-202ENST00000368436 MAGEA10P43363 369 aaPredicted RBP19.24■□□□□ 0.67
CKS1B-202ENST00000368436 SBK1Q52WX2 424 aa19.24■□□□□ 0.67
CKS1B-202ENST00000368436 LRCH3Q96II8 777 aa19.24■□□□□ 0.67
CKS1B-202ENST00000368436 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.24■□□□□ 0.67
CKS1B-202ENST00000368436 ARPP21Q9UBL0 812 aaPredicted RBP19.24■□□□□ 0.67
CKS1B-202ENST00000368436 PLS1Q14651 629 aa19.23■□□□□ 0.67
CKS1B-202ENST00000368436 TMEM132BQ14DG7 1078 aa19.23■□□□□ 0.67
CKS1B-202ENST00000368436 GIMAP6Q6P9H5 292 aa19.23■□□□□ 0.67
CKS1B-202ENST00000368436 KBTBD3Q8NAB2 608 aa19.23■□□□□ 0.67
CKS1B-202ENST00000368436 GSG1L2A8MUP6 293 aa19.22■□□□□ 0.67
CKS1B-202ENST00000368436 DNM1LO00429 736 aa19.22■□□□□ 0.67
CKS1B-202ENST00000368436 NCAPG2Q86XI2 1143 aa19.22■□□□□ 0.67
CKS1B-202ENST00000368436 SENP6Q9GZR1 1112 aaPredicted RBP19.22■□□□□ 0.67
CKS1B-202ENST00000368436 SLC5A4Q9NY91 659 aa19.22■□□□□ 0.67
CKS1B-202ENST00000368436 PLXNA1Q9UIW2 1896 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms