RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 TTC36A6NLP5 189 aa4.4□□□□□ -1.71
ECHDC1-205ENST00000368295 ATXN7O15265 892 aaPredicted RBP4.4□□□□□ -1.71
ECHDC1-205ENST00000368295 FAM157BP0CG42 384 aa4.4□□□□□ -1.71
ECHDC1-205ENST00000368295 GTF2F1P35269 517 aaKnown RBP eCLIP4.4□□□□□ -1.71
ECHDC1-205ENST00000368295 MRE11P49959 708 aa4.4□□□□□ -1.71
ECHDC1-205ENST00000368295 TMF1P82094 1093 aa4.4□□□□□ -1.71
ECHDC1-205ENST00000368295 FKBP4Q02790 459 aaKnown RBP eCLIP4.4□□□□□ -1.71
ECHDC1-205ENST00000368295 COL19A1Q14993 1142 aa4.4□□□□□ -1.71
ECHDC1-205ENST00000368295 ALKBH2Q6NS38 261 aa4.4□□□□□ -1.71
ECHDC1-205ENST00000368295 ZNF746Q6NUN9 644 aaPredicted RBP4.4□□□□□ -1.71
ECHDC1-205ENST00000368295 NBPF11Q86T75 865 aa4.4□□□□□ -1.71
ECHDC1-205ENST00000368295 GUCD1Q96NT3 240 aa4.4□□□□□ -1.71
ECHDC1-205ENST00000368295 TRERF1Q96PN7 1200 aa4.4□□□□□ -1.71
ECHDC1-205ENST00000368295 P2RX7Q99572 595 aaKnown RBP4.4□□□□□ -1.71
ECHDC1-205ENST00000368295 NAP1L4Q99733 375 aaKnown RBP4.4□□□□□ -1.71
ECHDC1-205ENST00000368295 FAM13BQ9NYF5 915 aa4.4□□□□□ -1.71
ECHDC1-205ENST00000368295 ATRXP46100 2492 aa4.39□□□□□ -1.71
ECHDC1-205ENST00000368295 WTIPA6NIX2 430 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-205ENST00000368295 FAM155AB1AL88 458 aaPredicted RBP4.39□□□□□ -1.71
ECHDC1-205ENST00000368295 EPB41L2O43491 1005 aaKnown RBP4.39□□□□□ -1.71
ECHDC1-205ENST00000368295 GYS1P13807 737 aa4.39□□□□□ -1.71
ECHDC1-205ENST00000368295 EPB42P16452 691 aa4.39□□□□□ -1.71
ECHDC1-205ENST00000368295 NPR3P17342 541 aa4.39□□□□□ -1.71
ECHDC1-205ENST00000368295 MPSTP25325 297 aa4.39□□□□□ -1.71
ECHDC1-205ENST00000368295 MAN1A1P33908 653 aa4.39□□□□□ -1.71
ECHDC1-205ENST00000368295 KCTD2Q14681 263 aa4.39□□□□□ -1.71
ECHDC1-205ENST00000368295 PKN2Q16513 984 aaKnown RBP4.39□□□□□ -1.71
ECHDC1-205ENST00000368295 DBN1Q16643 649 aa4.39□□□□□ -1.71
ECHDC1-205ENST00000368295 DPF3Q92784 378 aa4.39□□□□□ -1.71
ECHDC1-205ENST00000368295 TINF2Q9BSI4 451 aa4.39□□□□□ -1.71
ECHDC1-205ENST00000368295 NSD3Q9BZ95 1437 aa4.39□□□□□ -1.71
ECHDC1-205ENST00000368295 ZSWIM4Q9H7M6 989 aa4.39□□□□□ -1.71
ECHDC1-205ENST00000368295 ANO2Q9NQ90 1003 aa4.39□□□□□ -1.71
ECHDC1-205ENST00000368295 SAGE1Q9NXZ1 904 aa4.39□□□□□ -1.71
ECHDC1-205ENST00000368295 PCDHGC4Q9Y5F7 938 aa4.39□□□□□ -1.71
ECHDC1-205ENST00000368295 CCDC7Q96M83 1385 aa4.39□□□□□ -1.71
ECHDC1-205ENST00000368295 ACEP12821 1306 aa4.39□□□□□ -1.71
ECHDC1-205ENST00000368295 RPTORQ8N122 1335 aa4.39□□□□□ -1.71
ECHDC1-205ENST00000368295 TAF1LQ8IZX4 1826 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 MICAL2O94851 1124 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 IDH3AP50213 366 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 ARSDP51689 593 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 POU5F1Q01860 360 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 TYRO3Q06418 890 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 RBL2Q08999 1139 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 NOGQ13253 232 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 BTLAQ7Z6A9 289 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 TREML1Q86YW5 311 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 VWA5B2Q8N398 1253 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 ZNF280CQ8ND82 737 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 GTPBP3Q969Y2 492 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 RELTQ969Z4 430 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 CEP63Q96MT8 703 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 GLIS2Q9BZE0 524 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 ZCCHC2Q9C0B9 1178 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 PIF1Q9H611 641 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 ZFP64Q9NPA5 681 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 POGKQ9P215 609 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 STAP2Q9UGK3 403 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 CPSF1Q10570 1443 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 ZDBF2Q9HCK1 2354 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 CCDC189A1A4V9 331 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 CFAP69A5D8W1 941 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 STK10O94804 968 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 THBS1P07996 1170 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 RAD51AP2Q09MP3 1159 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 ITPK1Q13572 414 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 MTMR3Q13615 1198 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 CCSAPQ6IQ19 270 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 NLRP13Q86W25 1043 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 CFHR5Q9BXR6 569 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 BACH2Q9BYV9 841 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 DDX56Q9NY93 547 aaKnown RBP4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 BIN2Q9UBW5 565 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 TCEAL9Q9UHQ7 104 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 ATXN7L1Q9ULK2 861 aaPredicted RBP4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 NUP155O75694 1391 aa4.38□□□□□ -1.71
ECHDC1-205ENST00000368295 PPLO60437 1756 aa4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 KRBA1A5PL33 1030 aa4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 KHNYNO15037 678 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 DNAJC6O75061 913 aa4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 ZAP70P43403 619 aa4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 POU5F1BQ06416 359 aa4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 GNL2Q13823 731 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 UBAP2LQ14157 1087 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 SETDB1Q15047 1291 aa4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 ARTNQ5T4W7 220 aa4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 FILIP1Q7Z7B0 1213 aa4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 FMNL3Q8IVF7 1028 aa4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 ETFBKMTQ8IXQ9 262 aa4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 CSRNP1Q96S65 589 aa4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 GMLQ99445 158 aa4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 TGIF2Q9GZN2 237 aa4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 R3HDMLQ9H3Y0 253 aa4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 TYW1Q9NV66 732 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 NDFIP2Q9NV92 336 aa4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 IFT57Q9NWB7 429 aa4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 SRP68Q9UHB9 627 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 DMGDHQ9UI17 866 aaKnown RBP4.37□□□□□ -1.71
ECHDC1-205ENST00000368295 PRR12Q9ULL5 1215 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms