RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 MROH2AA6NES4 1674 aa13.05□□□□□ -0.32
COPA-202ENST00000368069 SMCO2A6NFE2 343 aa13.05□□□□□ -0.32
COPA-202ENST00000368069 ATP2C2O75185 946 aa13.05□□□□□ -0.32
COPA-202ENST00000368069 IFNAR1P17181 557 aa13.05□□□□□ -0.32
COPA-202ENST00000368069 IL6STP40189 918 aaPredicted RBP13.05□□□□□ -0.32
COPA-202ENST00000368069 MCAMP43121 646 aa13.05□□□□□ -0.32
COPA-202ENST00000368069 MAGEA1P43355 309 aa13.05□□□□□ -0.32
COPA-202ENST00000368069 MAN1B1Q9UKM7 699 aa13.05□□□□□ -0.32
COPA-202ENST00000368069 EBAG9O00559 213 aa13.05□□□□□ -0.32
COPA-202ENST00000368069 ATP1A3P13637 1013 aa13.05□□□□□ -0.32
COPA-202ENST00000368069 RPL13P26373 211 aaKnown RBP13.05□□□□□ -0.32
COPA-202ENST00000368069 SARM1Q6SZW1 724 aa13.05□□□□□ -0.32
COPA-202ENST00000368069 FCHSD1Q86WN1 690 aa13.05□□□□□ -0.32
COPA-202ENST00000368069 BICD1Q96G01 975 aa13.05□□□□□ -0.32
COPA-202ENST00000368069 FAM207AQ9NSI2 230 aaPredicted RBP13.05□□□□□ -0.32
COPA-202ENST00000368069 TMEM110-MUSTN1A8MSY1 372 aa13.05□□□□□ -0.32
COPA-202ENST00000368069 RNASE9P60153 205 aaKnown RBP13.05□□□□□ -0.32
COPA-202ENST00000368069 SPTLC3Q9NUV7 552 aa13.05□□□□□ -0.32
COPA-202ENST00000368069 TBC1D7Q9P0N9 293 aa13.05□□□□□ -0.32
COPA-202ENST00000368069 TOM1O60784 492 aa13.04□□□□□ -0.32
COPA-202ENST00000368069 PRPHP41219 470 aa13.04□□□□□ -0.32
COPA-202ENST00000368069 SMYD4Q8IYR2 804 aaPredicted RBP13.04□□□□□ -0.32
COPA-202ENST00000368069 BIN2Q9UBW5 565 aaPredicted RBP13.04□□□□□ -0.32
COPA-202ENST00000368069 RFX7Q2KHR2 1363 aa13.04□□□□□ -0.32
COPA-202ENST00000368069 RPN1P04843 607 aaKnown RBP13.04□□□□□ -0.32
COPA-202ENST00000368069 ERCC5P28715 1186 aaPredicted RBP13.04□□□□□ -0.32
COPA-202ENST00000368069 PLS1Q14651 629 aa13.04□□□□□ -0.32
COPA-202ENST00000368069 C10orf67Q8IYJ2 551 aa13.04□□□□□ -0.32
COPA-202ENST00000368069 CCDC155Q8N6L0 562 aa13.04□□□□□ -0.32
COPA-202ENST00000368069 TTLL11Q8NHH1 800 aa13.04□□□□□ -0.32
COPA-202ENST00000368069 NOX5Q96PH1 765 aa13.04□□□□□ -0.32
COPA-202ENST00000368069 PLCD4Q9BRC7 762 aa13.04□□□□□ -0.32
COPA-202ENST00000368069 RASAL2Q9UJF2 1139 aa13.04□□□□□ -0.32
COPA-202ENST00000368069 CLTCQ00610 1675 aaKnown RBP13.04□□□□□ -0.32
COPA-202ENST00000368069 COL3A1P02461 1466 aaPredicted RBP13.04□□□□□ -0.32
COPA-202ENST00000368069 CRKLP46109 303 aaKnown RBP13.04□□□□□ -0.32
COPA-202ENST00000368069 BRD3Q15059 726 aa13.04□□□□□ -0.32
COPA-202ENST00000368069 HERC4Q5GLZ8 1057 aaPredicted RBP13.04□□□□□ -0.32
COPA-202ENST00000368069 TYW1BQ6NUM6 668 aa13.04□□□□□ -0.32
COPA-202ENST00000368069 EYA3Q99504 573 aa13.04□□□□□ -0.32
COPA-202ENST00000368069 CETN3O15182 167 aa13.04□□□□□ -0.32
COPA-202ENST00000368069 CASP14P31944 242 aa13.04□□□□□ -0.32
COPA-202ENST00000368069 DYNLL1P63167 89 aaKnown RBP13.04□□□□□ -0.32
COPA-202ENST00000368069 FAM98CQ17RN3 349 aaKnown RBP13.04□□□□□ -0.32
COPA-202ENST00000368069 WHAMMP3Q1A5X7 153 aa13.04□□□□□ -0.32
COPA-202ENST00000368069 SLC9C1Q4G0N8 1177 aa13.04□□□□□ -0.32
COPA-202ENST00000368069 GSDMAQ96QA5 445 aa13.04□□□□□ -0.32
COPA-202ENST00000368069 ALDH8A1Q9H2A2 487 aaPredicted RBP13.04□□□□□ -0.32
COPA-202ENST00000368069 RAD51AP2Q09MP3 1159 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 PLA2G4DQ86XP0 818 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 CERS3Q8IU89 383 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 NELFCDQ8IXH7 590 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 GOLGA8HP0CJ92 632 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 EPB41P11171 864 aaKnown RBP13.03□□□□□ -0.32
COPA-202ENST00000368069 DESP17661 470 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 CTNNA2P26232 953 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 RASGRF1Q13972 1273 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 ASIC2Q16515 512 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 UTP14CQ5TAP6 766 aaKnown RBP13.03□□□□□ -0.32
COPA-202ENST00000368069 GIMAP7Q8NHV1 300 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 PLVAPQ9BX97 442 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.03□□□□□ -0.32
COPA-202ENST00000368069 SAR1BQ9Y6B6 198 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 PXDNLA1KZ92 1463 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 LOC102724428A0A0B4J2F2 783 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 H7C1D1 291 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 LIFRP42702 1097 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 COPB1P53618 953 aaKnown RBP13.03□□□□□ -0.32
COPA-202ENST00000368069 SIK1P57059 783 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 UBE4AQ14139 1066 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 HAUS3Q68CZ6 603 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 C2CD5Q86YS7 1000 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 TBC1D10CQ8IV04 446 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 VSTM4Q8IW00 320 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 MICALL1Q8N3F8 863 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 PIGBQ92521 554 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 PTPRUQ92729 1446 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 IFIH1Q9BYX4 1025 aaKnown RBP13.03□□□□□ -0.32
COPA-202ENST00000368069 PCDHB6Q9Y5E3 794 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 TSGA10IPQ3SY00 556 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 VWA3BQ502W6 1294 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 RRAGAQ7L523 313 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 CCDC84Q86UT8 332 aaPredicted RBP13.03□□□□□ -0.32
COPA-202ENST00000368069 TICAM2Q86XR7 235 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 GDAP1L1Q96MZ0 367 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 PODXL2Q9NZ53 605 aa13.03□□□□□ -0.32
COPA-202ENST00000368069 UBAP1LF5GYI3 381 aa13.02□□□□□ -0.32
COPA-202ENST00000368069 TECP42680 631 aa13.02□□□□□ -0.32
COPA-202ENST00000368069 CCDC144BQ3MJ40 725 aa13.02□□□□□ -0.32
COPA-202ENST00000368069 STOX1Q6ZVD7 989 aa13.02□□□□□ -0.32
COPA-202ENST00000368069 SAMSN1Q9NSI8 373 aaKnown RBP13.02□□□□□ -0.32
COPA-202ENST00000368069 DNM2P50570 870 aa13.02□□□□□ -0.33
COPA-202ENST00000368069 BBXQ8WY36 941 aaPredicted RBP13.02□□□□□ -0.33
COPA-202ENST00000368069 STRBPQ96SI9 672 aaKnown RBP13.02□□□□□ -0.33
COPA-202ENST00000368069 OR52Z1P0C646 297 aa13.02□□□□□ -0.33
COPA-202ENST00000368069 LONP1P36776 959 aaKnown RBP13.02□□□□□ -0.33
COPA-202ENST00000368069 MNAT1P51948 309 aa13.02□□□□□ -0.33
COPA-202ENST00000368069 FMR1NBQ8N0W7 255 aaPredicted RBP13.02□□□□□ -0.33
COPA-202ENST00000368069 NLRC4Q9NPP4 1024 aa13.02□□□□□ -0.33
COPA-202ENST00000368069 KLRF2D3W0D1 207 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms