RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 CPSF6Q16630 551 aaKnown RBP eCLIP7.52□□□□□ -1.21
RNU4-4P-201ENST00000364588 TPTE2Q6XPS3 522 aa7.52□□□□□ -1.21
RNU4-4P-201ENST00000364588 DNAJC14Q6Y2X3 702 aaPredicted RBP7.52□□□□□ -1.21
RNU4-4P-201ENST00000364588 KRT27Q7Z3Y8 459 aa7.52□□□□□ -1.21
RNU4-4P-201ENST00000364588 NECAB3Q96P71 396 aaPredicted RBP7.52□□□□□ -1.21
RNU4-4P-201ENST00000364588 CCDC86Q9H6F5 360 aaKnown RBP7.52□□□□□ -1.21
RNU4-4P-201ENST00000364588 BTG4Q9NY30 223 aa7.52□□□□□ -1.21
RNU4-4P-201ENST00000364588 TULP4Q9NRJ4 1543 aa7.52□□□□□ -1.21
RNU4-4P-201ENST00000364588 COL14A1Q05707 1796 aaKnown RBP7.51□□□□□ -1.21
RNU4-4P-201ENST00000364588 RAB6AP20340 208 aa7.51□□□□□ -1.21
RNU4-4P-201ENST00000364588 ARNTP27540 789 aa7.51□□□□□ -1.21
RNU4-4P-201ENST00000364588 KIF4BQ2VIQ3 1234 aa7.51□□□□□ -1.21
RNU4-4P-201ENST00000364588 DYMQ7RTS9 669 aa7.51□□□□□ -1.21
RNU4-4P-201ENST00000364588 PDZD3Q86UT5 571 aa7.51□□□□□ -1.21
RNU4-4P-201ENST00000364588 NGDNQ8NEJ9 315 aaKnown RBP7.51□□□□□ -1.21
RNU4-4P-201ENST00000364588 EZH1Q92800 747 aaPredicted RBP7.51□□□□□ -1.21
RNU4-4P-201ENST00000364588 GZF1Q9H116 711 aaPredicted RBP7.51□□□□□ -1.21
RNU4-4P-201ENST00000364588 ATXN3LQ9H3M9 355 aa7.51□□□□□ -1.21
RNU4-4P-201ENST00000364588 TTF2Q9UNY4 1162 aaKnown RBP7.51□□□□□ -1.21
RNU4-4P-201ENST00000364588 ARHGEF28Q8N1W1 1705 aaKnown RBP7.51□□□□□ -1.21
RNU4-4P-201ENST00000364588 CRYBG1Q9Y4K1 1723 aa7.51□□□□□ -1.21
RNU4-4P-201ENST00000364588 ITSN1Q15811 1721 aa7.5□□□□□ -1.21
RNU4-4P-201ENST00000364588 EIF3AQ14152 1382 aaKnown RBP7.5□□□□□ -1.21
RNU4-4P-201ENST00000364588 ENC1O14682 589 aa7.5□□□□□ -1.21
RNU4-4P-201ENST00000364588 GRIK1P39086 918 aa7.5□□□□□ -1.21
RNU4-4P-201ENST00000364588 ID3Q02535 119 aa7.5□□□□□ -1.21
RNU4-4P-201ENST00000364588 ARTNQ5T4W7 220 aa7.5□□□□□ -1.21
RNU4-4P-201ENST00000364588 SCARA3Q6AZY7 606 aa7.5□□□□□ -1.21
RNU4-4P-201ENST00000364588 CDPF1Q6NVV7 123 aa7.5□□□□□ -1.21
RNU4-4P-201ENST00000364588 ZDHHC13Q8IUH4 622 aa7.5□□□□□ -1.21
RNU4-4P-201ENST00000364588 FBLIM1Q8WUP2 373 aa7.5□□□□□ -1.21
RNU4-4P-201ENST00000364588 KCNB2Q92953 911 aa7.5□□□□□ -1.21
RNU4-4P-201ENST00000364588 DUSP9Q99956 384 aaKnown RBP7.5□□□□□ -1.21
RNU4-4P-201ENST00000364588 METTL22Q9BUU2 404 aaPredicted RBP7.5□□□□□ -1.21
RNU4-4P-201ENST00000364588 GSX1Q9H4S2 264 aaPredicted RBP7.5□□□□□ -1.21
RNU4-4P-201ENST00000364588 ZFP64Q9NPA5 681 aa7.5□□□□□ -1.21
RNU4-4P-201ENST00000364588 TMPRSS2O15393 492 aa7.49□□□□□ -1.21
RNU4-4P-201ENST00000364588 LIG1P18858 919 aa7.49□□□□□ -1.21
RNU4-4P-201ENST00000364588 ASPAP45381 313 aa7.49□□□□□ -1.21
RNU4-4P-201ENST00000364588 LRRC14Q15048 493 aa7.49□□□□□ -1.21
RNU4-4P-201ENST00000364588 ACSBG1Q96GR2 724 aa7.49□□□□□ -1.21
RNU4-4P-201ENST00000364588 ZC3H12CQ9C0D7 883 aaKnown RBP7.49□□□□□ -1.21
RNU4-4P-201ENST00000364588 ACSS3Q9H6R3 686 aa7.49□□□□□ -1.21
RNU4-4P-201ENST00000364588 PIDD1Q9HB75 910 aa7.49□□□□□ -1.21
RNU4-4P-201ENST00000364588 CBX8Q9HC52 389 aa7.49□□□□□ -1.21
RNU4-4P-201ENST00000364588 PRDM11Q9NQV5 511 aa7.49□□□□□ -1.21
RNU4-4P-201ENST00000364588 FAM105AQ9NUU6 356 aa7.49□□□□□ -1.21
RNU4-4P-201ENST00000364588 ATP7BP35670 1465 aa7.49□□□□□ -1.21
RNU4-4P-201ENST00000364588 ZNF862O60290 1169 aa7.48□□□□□ -1.21
RNU4-4P-201ENST00000364588 FBXO24O75426 580 aa7.48□□□□□ -1.21
RNU4-4P-201ENST00000364588 ZNF252P-AS1Q0IIN9 211 aa7.48□□□□□ -1.21
RNU4-4P-201ENST00000364588 NFKBIBQ15653 356 aa7.48□□□□□ -1.21
RNU4-4P-201ENST00000364588 CHRNA2Q15822 529 aa7.48□□□□□ -1.21
RNU4-4P-201ENST00000364588 MAP1SQ66K74 1059 aaPredicted RBP7.48□□□□□ -1.21
RNU4-4P-201ENST00000364588 INTS5Q6P9B9 1019 aaKnown RBP7.48□□□□□ -1.21
RNU4-4P-201ENST00000364588 SV2BQ7L1I2 683 aa7.48□□□□□ -1.21
RNU4-4P-201ENST00000364588 SHKBP1Q8TBC3 707 aa7.48□□□□□ -1.21
RNU4-4P-201ENST00000364588 MFSD14AQ96MC6 490 aa7.48□□□□□ -1.21
RNU4-4P-201ENST00000364588 SEMA6CQ9H3T2 930 aa7.48□□□□□ -1.21
RNU4-4P-201ENST00000364588 CRIM1Q9NZV1 1036 aa7.48□□□□□ -1.21
RNU4-4P-201ENST00000364588 AK5Q9Y6K8 562 aa7.48□□□□□ -1.21
RNU4-4P-201ENST00000364588 PHRF1Q9P1Y6 1649 aaKnown RBP7.48□□□□□ -1.21
RNU4-4P-201ENST00000364588 SPATA31A5Q5VU36 1347 aa7.48□□□□□ -1.21
RNU4-4P-201ENST00000364588 SPATA31A7Q8IWB4 1347 aa7.48□□□□□ -1.21
RNU4-4P-201ENST00000364588 KIAA0232Q92628 1395 aa7.47□□□□□ -1.21
RNU4-4P-201ENST00000364588 RGPD1P0DJD0 1748 aa7.47□□□□□ -1.21
RNU4-4P-201ENST00000364588 ZBTB7CA1YPR0 619 aa7.47□□□□□ -1.21
RNU4-4P-201ENST00000364588 COBLO75128 1261 aa7.47□□□□□ -1.21
RNU4-4P-201ENST00000364588 TRIM37O94972 964 aa7.47□□□□□ -1.21
RNU4-4P-201ENST00000364588 ZC3H6P61129 1189 aaKnown RBP7.47□□□□□ -1.21
RNU4-4P-201ENST00000364588 PSMD2Q13200 908 aa7.47□□□□□ -1.21
RNU4-4P-201ENST00000364588 LLGL2Q6P1M3 1020 aa7.47□□□□□ -1.21
RNU4-4P-201ENST00000364588 CDK19Q9BWU1 502 aa7.47□□□□□ -1.21
RNU4-4P-201ENST00000364588 ATG3Q9NT62 314 aa7.47□□□□□ -1.21
RNU4-4P-201ENST00000364588 PCDHGC5Q9Y5F6 944 aa7.47□□□□□ -1.21
RNU4-4P-201ENST00000364588 THSD7AQ9UPZ6 1657 aa7.47□□□□□ -1.21
RNU4-4P-201ENST00000364588 TNS1Q9HBL0 1735 aaKnown RBP7.47□□□□□ -1.21
RNU4-4P-201ENST00000364588 TGFB1P01137 390 aa7.46□□□□□ -1.22
RNU4-4P-201ENST00000364588 CELA3AP09093 270 aa7.46□□□□□ -1.22
RNU4-4P-201ENST00000364588 CD97P48960 835 aa7.46□□□□□ -1.22
RNU4-4P-201ENST00000364588 PCNX4Q63HM2 1172 aa7.46□□□□□ -1.22
RNU4-4P-201ENST00000364588 FBXO33Q7Z6M2 555 aa7.46□□□□□ -1.22
RNU4-4P-201ENST00000364588 ZAR1Q86SH2 424 aa7.46□□□□□ -1.22
RNU4-4P-201ENST00000364588 HOMEZQ8IX15 550 aa7.46□□□□□ -1.22
RNU4-4P-201ENST00000364588 STK35Q8TDR2 534 aa7.46□□□□□ -1.22
RNU4-4P-201ENST00000364588 WDR89Q96FK6 387 aaPredicted RBP7.46□□□□□ -1.22
RNU4-4P-201ENST00000364588 TBC1D32Q96NH3 1257 aa7.46□□□□□ -1.22
RNU4-4P-201ENST00000364588 OSBPL1AQ9BXW6 950 aa7.46□□□□□ -1.22
RNU4-4P-201ENST00000364588 BCL11AQ9H165 835 aa7.46□□□□□ -1.22
RNU4-4P-201ENST00000364588 USP35Q9P2H5 1018 aa7.46□□□□□ -1.22
RNU4-4P-201ENST00000364588 PRKAG2Q9UGJ0 569 aa7.46□□□□□ -1.22
RNU4-4P-201ENST00000364588 PPP1R9AQ9ULJ8 1098 aa7.46□□□□□ -1.22
RNU4-4P-201ENST00000364588 CYP8B1Q9UNU6 501 aa7.46□□□□□ -1.22
RNU4-4P-201ENST00000364588 DAGLAQ9Y4D2 1042 aa7.46□□□□□ -1.22
RNU4-4P-201ENST00000364588 TOPAZ1Q8N9V7 1692 aa7.46□□□□□ -1.22
RNU4-4P-201ENST00000364588 LRP5O75197 1615 aa7.45□□□□□ -1.22
RNU4-4P-201ENST00000364588 WDR64B1ANS9 1081 aa7.45□□□□□ -1.22
RNU4-4P-201ENST00000364588 NFICP08651 508 aa7.45□□□□□ -1.22
RNU4-4P-201ENST00000364588 CYP27A1Q02318 531 aa7.45□□□□□ -1.22
RNU4-4P-201ENST00000364588 FBXL6Q8N531 539 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms