RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 MFAP3LO75121 409 aa17.77■□□□□ 0.44
CLSTN1-201ENST00000361311 GUCY2DQ02846 1103 aa17.77■□□□□ 0.44
CLSTN1-201ENST00000361311 RPS6KA1Q15418 735 aa17.77■□□□□ 0.44
CLSTN1-201ENST00000361311 DPF2Q92785 391 aa17.77■□□□□ 0.44
CLSTN1-201ENST00000361311 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.77■□□□□ 0.44
CLSTN1-201ENST00000361311 UTP11Q9Y3A2 253 aaKnown RBP17.77■□□□□ 0.44
CLSTN1-201ENST00000361311 HGSO14964 777 aaPredicted RBP17.77■□□□□ 0.44
CLSTN1-201ENST00000361311 APOA5Q6Q788 366 aa17.77■□□□□ 0.44
CLSTN1-201ENST00000361311 ANKRD13CQ8N6S4 541 aa17.77■□□□□ 0.44
CLSTN1-201ENST00000361311 NCAPGQ9BPX3 1015 aa17.77■□□□□ 0.44
CLSTN1-201ENST00000361311 LOC102724159A0A0B4J2E5 919 aa17.77■□□□□ 0.43
CLSTN1-201ENST00000361311 FRMD3A2A2Y4 597 aa17.77■□□□□ 0.43
CLSTN1-201ENST00000361311 SF3B2Q13435 895 aaKnown RBP17.77■□□□□ 0.43
CLSTN1-201ENST00000361311 PWP2Q15269 919 aaKnown RBP17.77■□□□□ 0.43
CLSTN1-201ENST00000361311 SV2BQ7L1I2 683 aa17.77■□□□□ 0.43
CLSTN1-201ENST00000361311 ARHGEF25Q86VW2 580 aa17.77■□□□□ 0.43
CLSTN1-201ENST00000361311 FAM89AQ96GI7 184 aa17.77■□□□□ 0.43
CLSTN1-201ENST00000361311 PLVAPQ9BX97 442 aa17.77■□□□□ 0.43
CLSTN1-201ENST00000361311 TEX13AQ9BXU3 409 aaPredicted RBP17.77■□□□□ 0.43
CLSTN1-201ENST00000361311 IRX2Q9BZI1 471 aaPredicted RBP17.77■□□□□ 0.43
CLSTN1-201ENST00000361311 ZNF532Q9HCE3 1301 aa17.77■□□□□ 0.43
CLSTN1-201ENST00000361311 NDUFA10O95299 355 aa17.76■□□□□ 0.43
CLSTN1-201ENST00000361311 C6orf163Q5TEZ5 329 aa17.76■□□□□ 0.43
CLSTN1-201ENST00000361311 ADGRG1Q9Y653 693 aa17.76■□□□□ 0.43
CLSTN1-201ENST00000361311 C2orf54Q08AI8 447 aa17.76■□□□□ 0.43
CLSTN1-201ENST00000361311 KRT28Q7Z3Y7 464 aa17.76■□□□□ 0.43
CLSTN1-201ENST00000361311 TBC1D5Q92609 795 aa17.76■□□□□ 0.43
CLSTN1-201ENST00000361311 SYMPKQ92797 1274 aaKnown RBP17.76■□□□□ 0.43
CLSTN1-201ENST00000361311 TACO1Q9BSH4 297 aaKnown RBP17.76■□□□□ 0.43
CLSTN1-201ENST00000361311 TRIM7Q9C029 511 aa17.76■□□□□ 0.43
CLSTN1-201ENST00000361311 FAM184BQ9ULE4 1060 aa17.76■□□□□ 0.43
CLSTN1-201ENST00000361311 LMNTD2Q8IXW0 634 aa17.76■□□□□ 0.43
CLSTN1-201ENST00000361311 EEF2KMTQ96G04 330 aa17.76■□□□□ 0.43
CLSTN1-201ENST00000361311 NLRC4Q9NPP4 1024 aa17.76■□□□□ 0.43
CLSTN1-201ENST00000361311 PARP3Q9Y6F1 533 aa17.76■□□□□ 0.43
CLSTN1-201ENST00000361311 IGSF1Q8N6C5 1336 aa17.76■□□□□ 0.43
CLSTN1-201ENST00000361311 PPP2R5BQ15173 497 aa17.76■□□□□ 0.43
CLSTN1-201ENST00000361311 GRIPAP1Q4V328 841 aa17.76■□□□□ 0.43
CLSTN1-201ENST00000361311 AKNAD1Q5T1N1 836 aa17.76■□□□□ 0.43
CLSTN1-201ENST00000361311 INTS8Q75QN2 995 aaKnown RBP17.76■□□□□ 0.43
CLSTN1-201ENST00000361311 GTPBP6O43824 516 aaPredicted RBP17.75■□□□□ 0.43
CLSTN1-201ENST00000361311 RPSAP08865 295 aaKnown RBP17.75■□□□□ 0.43
CLSTN1-201ENST00000361311 VSNL1P62760 191 aa17.75■□□□□ 0.43
CLSTN1-201ENST00000361311 ZNF496Q96IT1 587 aaPredicted RBP17.75■□□□□ 0.43
CLSTN1-201ENST00000361311 ALDH8A1Q9H2A2 487 aaPredicted RBP17.75■□□□□ 0.43
CLSTN1-201ENST00000361311 PSD3Q9NYI0 1048 aa17.75■□□□□ 0.43
CLSTN1-201ENST00000361311 CEP83Q9Y592 693 aa17.75■□□□□ 0.43
CLSTN1-201ENST00000361311 CLTAP09496 248 aa17.75■□□□□ 0.43
CLSTN1-201ENST00000361311 PEX19P40855 299 aa17.75■□□□□ 0.43
CLSTN1-201ENST00000361311 LETM2Q2VYF4 491 aa17.75■□□□□ 0.43
CLSTN1-201ENST00000361311 ZNF654Q8IZM8 581 aa17.75■□□□□ 0.43
CLSTN1-201ENST00000361311 C6orf50Q9HD87 102 aa17.75■□□□□ 0.43
CLSTN1-201ENST00000361311 ZPR1O75312 459 aa17.75■□□□□ 0.43
CLSTN1-201ENST00000361311 GCP02774 474 aa17.75■□□□□ 0.43
CLSTN1-201ENST00000361311 NNTQ13423 1086 aa17.75■□□□□ 0.43
CLSTN1-201ENST00000361311 BICDL1Q6ZP65 573 aa17.75■□□□□ 0.43
CLSTN1-201ENST00000361311 NGLY1Q96IV0 654 aa17.75■□□□□ 0.43
CLSTN1-201ENST00000361311 ARHGAP31Q2M1Z3 1444 aa17.75■□□□□ 0.43
CLSTN1-201ENST00000361311 SH3TC1Q8TE82 1336 aa17.75■□□□□ 0.43
CLSTN1-201ENST00000361311 BUB1O43683 1085 aa17.75■□□□□ 0.43
CLSTN1-201ENST00000361311 PRDM1O75626 825 aa17.75■□□□□ 0.43
CLSTN1-201ENST00000361311 CALCOCO2Q13137 446 aa17.75■□□□□ 0.43
CLSTN1-201ENST00000361311 CHRNA2Q15822 529 aa17.75■□□□□ 0.43
CLSTN1-201ENST00000361311 N4BP2L2Q92802 583 aaPredicted RBP17.75■□□□□ 0.43
CLSTN1-201ENST00000361311 ACTN4O43707 911 aaKnown RBP17.74■□□□□ 0.43
CLSTN1-201ENST00000361311 GGCXP38435 758 aa17.74■□□□□ 0.43
CLSTN1-201ENST00000361311 DAAM2Q86T65 1068 aa17.74■□□□□ 0.43
CLSTN1-201ENST00000361311 TBC1D31Q96DN5 1066 aa17.74■□□□□ 0.43
CLSTN1-201ENST00000361311 IQCDQ96DY2 449 aa17.74■□□□□ 0.43
CLSTN1-201ENST00000361311 TBC1D8O95759 1140 aa17.74■□□□□ 0.43
CLSTN1-201ENST00000361311 PDCLQ13371 301 aa17.74■□□□□ 0.43
CLSTN1-201ENST00000361311 UBAP1LF5GYI3 381 aa17.74■□□□□ 0.43
CLSTN1-201ENST00000361311 TSPY3P0CV98 308 aa17.74■□□□□ 0.43
CLSTN1-201ENST00000361311 TSPY8P0CW00 308 aa17.74■□□□□ 0.43
CLSTN1-201ENST00000361311 PPP2R5AQ15172 486 aa17.74■□□□□ 0.43
CLSTN1-201ENST00000361311 DCAF5Q96JK2 942 aa17.74■□□□□ 0.43
CLSTN1-201ENST00000361311 VWA3BQ502W6 1294 aa17.73■□□□□ 0.43
CLSTN1-201ENST00000361311 CHUKO15111 745 aa17.73■□□□□ 0.43
CLSTN1-201ENST00000361311 KLHL30Q0D2K2 578 aa17.73■□□□□ 0.43
CLSTN1-201ENST00000361311 MTF1Q14872 753 aa17.73■□□□□ 0.43
CLSTN1-201ENST00000361311 NKIRAS1Q9NYS0 192 aa17.73■□□□□ 0.43
CLSTN1-201ENST00000361311 POTEJP0CG39 1038 aa17.73■□□□□ 0.43
CLSTN1-201ENST00000361311 ZBTB16Q05516 673 aa17.73■□□□□ 0.43
CLSTN1-201ENST00000361311 FANCBQ8NB91 859 aa17.73■□□□□ 0.43
CLSTN1-201ENST00000361311 TMEM110-MUSTN1A8MSY1 372 aa17.73■□□□□ 0.43
CLSTN1-201ENST00000361311 TBCAO75347 108 aaKnown RBP17.73■□□□□ 0.43
CLSTN1-201ENST00000361311 RPN1P04843 607 aaKnown RBP17.73■□□□□ 0.43
CLSTN1-201ENST00000361311 NAP1L3Q99457 506 aaPredicted RBP17.73■□□□□ 0.43
CLSTN1-201ENST00000361311 ASIC2Q16515 512 aa17.72■□□□□ 0.43
CLSTN1-201ENST00000361311 RESP18Q5W5W9 173 aa17.72■□□□□ 0.43
CLSTN1-201ENST00000361311 EPB41L5Q9HCM4 733 aa17.72■□□□□ 0.43
CLSTN1-201ENST00000361311 HEXIM1O94992 359 aaKnown RBP17.72■□□□□ 0.43
CLSTN1-201ENST00000361311 PARP1P09874 1014 aaKnown RBP17.72■□□□□ 0.43
CLSTN1-201ENST00000361311 LRRC24Q50LG9 513 aa17.72■□□□□ 0.43
CLSTN1-201ENST00000361311 SFMBT2Q5VUG0 894 aa17.72■□□□□ 0.43
CLSTN1-201ENST00000361311 ALS2CLQ60I27 953 aa17.72■□□□□ 0.43
CLSTN1-201ENST00000361311 FNBP4Q8N3X1 1017 aaPredicted RBP17.72■□□□□ 0.43
CLSTN1-201ENST00000361311 FOXP1Q9H334 677 aaPredicted RBP17.72■□□□□ 0.43
CLSTN1-201ENST00000361311 IRS4O14654 1257 aaPredicted RBP17.72■□□□□ 0.43
CLSTN1-201ENST00000361311 PTGDRQ13258 359 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms