RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 RRP36Q96EU6 259 aaKnown RBP17.63■□□□□ 0.41
RTN3-205ENST00000356000 FAM227BQ96M60 508 aa17.63■□□□□ 0.41
RTN3-205ENST00000356000 ZNF570Q96NI8 536 aa17.63■□□□□ 0.41
RTN3-205ENST00000356000 TSGA10Q9BZW7 698 aa17.63■□□□□ 0.41
RTN3-205ENST00000356000 U3KPZ7 1027 aaPredicted RBP17.63■□□□□ 0.41
RTN3-205ENST00000356000 PTPDC1A2A3K4 754 aa17.63■□□□□ 0.41
RTN3-205ENST00000356000 HIP1O00291 1037 aa17.63■□□□□ 0.41
RTN3-205ENST00000356000 ANP32DO95626 131 aa17.63■□□□□ 0.41
RTN3-205ENST00000356000 CSB-PGBD3P0DP91 1061 aa17.63■□□□□ 0.41
RTN3-205ENST00000356000 ABCD1P33897 745 aa17.63■□□□□ 0.41
RTN3-205ENST00000356000 NMIQ13287 307 aaPredicted RBP17.63■□□□□ 0.41
RTN3-205ENST00000356000 NNTQ13423 1086 aa17.63■□□□□ 0.41
RTN3-205ENST00000356000 Q6ZUG5 572 aa17.63■□□□□ 0.41
RTN3-205ENST00000356000 SH2D3CQ8N5H7 860 aa17.63■□□□□ 0.41
RTN3-205ENST00000356000 PIK3R5Q8WYR1 880 aa17.63■□□□□ 0.41
RTN3-205ENST00000356000 TBC1D5Q92609 795 aa17.63■□□□□ 0.41
RTN3-205ENST00000356000 CYFIP2Q96F07 1278 aa17.63■□□□□ 0.41
RTN3-205ENST00000356000 RUFY1Q96T51 708 aa17.63■□□□□ 0.41
RTN3-205ENST00000356000 ATP7BP35670 1465 aa17.63■□□□□ 0.41
RTN3-205ENST00000356000 ALS2Q96Q42 1657 aa17.62■□□□□ 0.41
RTN3-205ENST00000356000 NRAPQ86VF7 1730 aa17.62■□□□□ 0.41
RTN3-205ENST00000356000 FBLN1P23142 703 aa17.62■□□□□ 0.41
RTN3-205ENST00000356000 PDE4BQ07343 736 aa17.62■□□□□ 0.41
RTN3-205ENST00000356000 RBL2Q08999 1139 aa17.62■□□□□ 0.41
RTN3-205ENST00000356000 KRT32Q14532 448 aa17.62■□□□□ 0.41
RTN3-205ENST00000356000 HSP90AA4PQ58FG1 418 aa17.62■□□□□ 0.41
RTN3-205ENST00000356000 MTHFD1LQ6UB35 978 aa17.62■□□□□ 0.41
RTN3-205ENST00000356000 PPP1R42Q7Z4L9 355 aa17.62■□□□□ 0.41
RTN3-205ENST00000356000 CCHCR1Q8TD31 782 aa17.62■□□□□ 0.41
RTN3-205ENST00000356000 DDX17Q92841 729 aaKnown RBP17.62■□□□□ 0.41
RTN3-205ENST00000356000 MIS18AQ9NYP9 233 aa17.62■□□□□ 0.41
RTN3-205ENST00000356000 ZSCAN9O15535 394 aaPredicted RBP17.62■□□□□ 0.41
RTN3-205ENST00000356000 A1BGP04217 495 aa17.62■□□□□ 0.41
RTN3-205ENST00000356000 PPFIBP1Q86W92 1011 aa17.62■□□□□ 0.41
RTN3-205ENST00000356000 FAM81AQ8TBF8 368 aa17.62■□□□□ 0.41
RTN3-205ENST00000356000 ZFAND2BQ8WV99 257 aa17.62■□□□□ 0.41
RTN3-205ENST00000356000 RUBCNQ92622 972 aa17.62■□□□□ 0.41
RTN3-205ENST00000356000 PLEKHG4BQ96PX9 1271 aa17.62■□□□□ 0.41
RTN3-205ENST00000356000 USP44Q9H0E7 712 aa17.62■□□□□ 0.41
RTN3-205ENST00000356000 BAIAP2L1Q9UHR4 511 aa17.62■□□□□ 0.41
RTN3-205ENST00000356000 ZNF232Q9UNY5 417 aa17.62■□□□□ 0.41
RTN3-205ENST00000356000 PSMD14O00487 310 aa17.61■□□□□ 0.41
RTN3-205ENST00000356000 HSF2BPO75031 334 aa17.61■□□□□ 0.41
RTN3-205ENST00000356000 MDH1P40925 334 aaKnown RBP17.61■□□□□ 0.41
RTN3-205ENST00000356000 RIPK1Q13546 671 aa17.61■□□□□ 0.41
RTN3-205ENST00000356000 CCDC96Q2M329 555 aa17.61■□□□□ 0.41
RTN3-205ENST00000356000 P3H4Q92791 437 aa17.61■□□□□ 0.41
RTN3-205ENST00000356000 BLOC1S6Q9UL45 172 aa17.61■□□□□ 0.41
RTN3-205ENST00000356000 SAR1BQ9Y6B6 198 aa17.61■□□□□ 0.41
RTN3-205ENST00000356000 MAP2P11137 1827 aaKnown RBP17.61■□□□□ 0.41
RTN3-205ENST00000356000 A0A1B0GTH6 734 aa17.61■□□□□ 0.41
RTN3-205ENST00000356000 UBTFL1P0CB47 393 aaPredicted RBP17.61■□□□□ 0.41
RTN3-205ENST00000356000 RANBP1P43487 201 aa17.61■□□□□ 0.41
RTN3-205ENST00000356000 PAPD7Q5XG87 772 aaKnown RBP17.61■□□□□ 0.41
RTN3-205ENST00000356000 ARHGAP22Q7Z5H3 698 aa17.61■□□□□ 0.41
RTN3-205ENST00000356000 EHBP1Q8NDI1 1231 aa17.61■□□□□ 0.41
RTN3-205ENST00000356000 NFE2L3Q9Y4A8 694 aa17.61■□□□□ 0.41
RTN3-205ENST00000356000 SALL1Q9NSC2 1324 aa17.61■□□□□ 0.41
RTN3-205ENST00000356000 MFAP3LO75121 409 aa17.6■□□□□ 0.41
RTN3-205ENST00000356000 MKRN4PQ13434 485 aaPredicted RBP17.6■□□□□ 0.41
RTN3-205ENST00000356000 PNOCQ13519 176 aa17.6■□□□□ 0.41
RTN3-205ENST00000356000 CCDC170Q8IYT3 715 aa17.6■□□□□ 0.41
RTN3-205ENST00000356000 TSEN2Q8NCE0 465 aaKnown RBP17.6■□□□□ 0.41
RTN3-205ENST00000356000 NEK1Q96PY6 1258 aa17.6■□□□□ 0.41
RTN3-205ENST00000356000 ECHDC1Q9NTX5 307 aa17.6■□□□□ 0.41
RTN3-205ENST00000356000 OVOS2A0A0G2JMS6 1433 aa17.6■□□□□ 0.41
RTN3-205ENST00000356000 OVOS2A0A0J9YW53 1432 aa17.6■□□□□ 0.41
RTN3-205ENST00000356000 OVOS2Q6IE36 1432 aa17.6■□□□□ 0.41
RTN3-205ENST00000356000 B4DLN1 442 aa17.6■□□□□ 0.41
RTN3-205ENST00000356000 GNAT1P11488 350 aa17.6■□□□□ 0.41
RTN3-205ENST00000356000 GUCY1B3Q02153 619 aa17.6■□□□□ 0.41
RTN3-205ENST00000356000 GALNT15Q8N3T1 639 aa17.6■□□□□ 0.41
RTN3-205ENST00000356000 CCDC51Q96ER9 411 aa17.6■□□□□ 0.41
RTN3-205ENST00000356000 TSC22D3Q99576 134 aa17.6■□□□□ 0.41
RTN3-205ENST00000356000 RGPD1P0DJD0 1748 aa17.59■□□□□ 0.41
RTN3-205ENST00000356000 E7EVH7 732 aa17.59■□□□□ 0.41
RTN3-205ENST00000356000 RNF8O76064 485 aa17.59■□□□□ 0.41
RTN3-205ENST00000356000 ECEL1O95672 775 aa17.59■□□□□ 0.41
RTN3-205ENST00000356000 CDC27P30260 824 aa17.59■□□□□ 0.41
RTN3-205ENST00000356000 SYKP43405 635 aa17.59■□□□□ 0.41
RTN3-205ENST00000356000 KCTD16Q68DU8 428 aa17.59■□□□□ 0.41
RTN3-205ENST00000356000 L3MBTL3Q96JM7 780 aaPredicted RBP17.59■□□□□ 0.41
RTN3-205ENST00000356000 SENP2Q9HC62 589 aa17.59■□□□□ 0.41
RTN3-205ENST00000356000 HDAC6Q9UBN7 1215 aa17.59■□□□□ 0.41
RTN3-205ENST00000356000 MROH7-TTC4A0A0A0MT08 1334 aa17.59■□□□□ 0.41
RTN3-205ENST00000356000 FOXO3O43524 673 aa17.59■□□□□ 0.41
RTN3-205ENST00000356000 ALDH1L1O75891 902 aa17.59■□□□□ 0.41
RTN3-205ENST00000356000 GHRP10912 638 aa17.59■□□□□ 0.41
RTN3-205ENST00000356000 NR1D1P20393 614 aa17.59■□□□□ 0.41
RTN3-205ENST00000356000 BMP6P22004 513 aa17.59■□□□□ 0.41
RTN3-205ENST00000356000 MSL1Q68DK7 614 aa17.59■□□□□ 0.41
RTN3-205ENST00000356000 N4BP2Q86UW6 1770 aaPredicted RBP17.59■□□□□ 0.41
RTN3-205ENST00000356000 TMTC1Q8IUR5 882 aa17.59■□□□□ 0.41
RTN3-205ENST00000356000 ENOX1Q8TC92 643 aaKnown RBP17.59■□□□□ 0.41
RTN3-205ENST00000356000 CNKSR1Q969H4 720 aa17.59■□□□□ 0.41
RTN3-205ENST00000356000 SEC62Q99442 399 aaKnown RBP17.59■□□□□ 0.41
RTN3-205ENST00000356000 SLC5A4Q9NY91 659 aa17.59■□□□□ 0.41
RTN3-205ENST00000356000 G3BP2Q9UN86 482 aaKnown RBP17.59■□□□□ 0.41
RTN3-205ENST00000356000 HPSEQ9Y251 543 aa17.59■□□□□ 0.41
RTN3-205ENST00000356000 MED23Q9ULK4 1368 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms