RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 MRVI1Q9Y6F6 885 aa11.87□□□□□ -0.51
CAPRIN1-201ENST00000341394 PSDA5PKW4 1024 aaPredicted RBP11.87□□□□□ -0.51
CAPRIN1-201ENST00000341394 HGSO14964 777 aaPredicted RBP11.87□□□□□ -0.51
CAPRIN1-201ENST00000341394 CCP110O43303 1012 aa11.87□□□□□ -0.51
CAPRIN1-201ENST00000341394 ZEB2O60315 1214 aa11.87□□□□□ -0.51
CAPRIN1-201ENST00000341394 PRDM1O75626 825 aa11.87□□□□□ -0.51
CAPRIN1-201ENST00000341394 GNAT2P19087 354 aa11.87□□□□□ -0.51
CAPRIN1-201ENST00000341394 GSDMDP57764 484 aa11.87□□□□□ -0.51
CAPRIN1-201ENST00000341394 KSR1Q8IVT5 923 aa11.87□□□□□ -0.51
CAPRIN1-201ENST00000341394 IFNL3Q8IZI9 196 aa11.87□□□□□ -0.51
CAPRIN1-201ENST00000341394 STRBPQ96SI9 672 aaKnown RBP11.87□□□□□ -0.51
CAPRIN1-201ENST00000341394 POLLQ9UGP5 575 aa11.87□□□□□ -0.51
CAPRIN1-201ENST00000341394 BAG3O95817 575 aa11.86□□□□□ -0.51
CAPRIN1-201ENST00000341394 MECOMQ03112 1051 aa11.86□□□□□ -0.51
CAPRIN1-201ENST00000341394 DHX32Q7L7V1 743 aaKnown RBP11.86□□□□□ -0.51
CAPRIN1-201ENST00000341394 C21orf2O43822 256 aa11.86□□□□□ -0.51
CAPRIN1-201ENST00000341394 MRPS25P82663 173 aaKnown RBP11.86□□□□□ -0.51
CAPRIN1-201ENST00000341394 CTDSPL2Q05D32 466 aa11.86□□□□□ -0.51
CAPRIN1-201ENST00000341394 MFSD6Q6ZSS7 791 aa11.86□□□□□ -0.51
CAPRIN1-201ENST00000341394 TICAM2Q86XR7 235 aa11.86□□□□□ -0.51
CAPRIN1-201ENST00000341394 KIAA1524Q8TCG1 905 aa11.86□□□□□ -0.51
CAPRIN1-201ENST00000341394 CLIC6Q96NY7 704 aa11.86□□□□□ -0.51
CAPRIN1-201ENST00000341394 VPS16Q9H269 839 aa11.86□□□□□ -0.51
CAPRIN1-201ENST00000341394 DBNDD1Q9H9R9 158 aa11.86□□□□□ -0.51
CAPRIN1-201ENST00000341394 DUOX1Q9NRD9 1551 aa11.86□□□□□ -0.51
CAPRIN1-201ENST00000341394 MYH2Q9UKX2 1941 aa11.86□□□□□ -0.51
CAPRIN1-201ENST00000341394 GSTO1P78417 241 aa11.86□□□□□ -0.51
CAPRIN1-201ENST00000341394 PPP2R3AQ06190 1150 aa11.86□□□□□ -0.51
CAPRIN1-201ENST00000341394 SENP2Q9HC62 589 aa11.86□□□□□ -0.51
CAPRIN1-201ENST00000341394 CTAGE5O15320 804 aa11.85□□□□□ -0.51
CAPRIN1-201ENST00000341394 RDXP35241 583 aaKnown RBP11.85□□□□□ -0.51
CAPRIN1-201ENST00000341394 MNAT1P51948 309 aa11.85□□□□□ -0.51
CAPRIN1-201ENST00000341394 FAM160A1Q05DH4 1040 aa11.85□□□□□ -0.51
CAPRIN1-201ENST00000341394 PNOCQ13519 176 aa11.85□□□□□ -0.51
CAPRIN1-201ENST00000341394 DIXDC1Q155Q3 683 aa11.85□□□□□ -0.51
CAPRIN1-201ENST00000341394 TDRD12Q587J7 1177 aaKnown RBP11.85□□□□□ -0.51
CAPRIN1-201ENST00000341394 CCDC47Q96A33 483 aaKnown RBP11.85□□□□□ -0.51
CAPRIN1-201ENST00000341394 KCNJ14Q9UNX9 436 aa11.85□□□□□ -0.51
CAPRIN1-201ENST00000341394 LRRC37AA6NMS7 1700 aa11.85□□□□□ -0.51
CAPRIN1-201ENST00000341394 SLX4Q8IY92 1834 aa11.85□□□□□ -0.51
CAPRIN1-201ENST00000341394 B4E1Z4 1266 aa11.85□□□□□ -0.51
CAPRIN1-201ENST00000341394 KRT18P05783 430 aaKnown RBP11.85□□□□□ -0.51
CAPRIN1-201ENST00000341394 ANTXR2P58335 489 aa11.85□□□□□ -0.51
CAPRIN1-201ENST00000341394 TTC19Q6DKK2 380 aaPredicted RBP11.85□□□□□ -0.51
CAPRIN1-201ENST00000341394 CTR9Q6PD62 1173 aa11.85□□□□□ -0.51
CAPRIN1-201ENST00000341394 MICALL1Q8N3F8 863 aa11.85□□□□□ -0.51
CAPRIN1-201ENST00000341394 CDK5RAP3Q96JB5 506 aa11.85□□□□□ -0.51
CAPRIN1-201ENST00000341394 CLSTN2Q9H4D0 955 aa11.85□□□□□ -0.51
CAPRIN1-201ENST00000341394 CCDC88AQ3V6T2 1871 aa11.85□□□□□ -0.51
CAPRIN1-201ENST00000341394 ZMYND10O75800 440 aa11.85□□□□□ -0.51
CAPRIN1-201ENST00000341394 KIAA0754O94854 1291 aa11.85□□□□□ -0.51
CAPRIN1-201ENST00000341394 CYP2D7A0A087X1C5 515 aa11.84□□□□□ -0.51
CAPRIN1-201ENST00000341394 GSG1L2A8MUP6 293 aa11.84□□□□□ -0.51
CAPRIN1-201ENST00000341394 FANCCQ00597 558 aa11.84□□□□□ -0.51
CAPRIN1-201ENST00000341394 CCDC125Q86Z20 511 aa11.84□□□□□ -0.51
CAPRIN1-201ENST00000341394 RGPD3A6NKT7 1758 aaPredicted RBP11.84□□□□□ -0.51
CAPRIN1-201ENST00000341394 RGPD4Q7Z3J3 1758 aa11.84□□□□□ -0.51
CAPRIN1-201ENST00000341394 HLTFQ14527 1009 aaKnown RBP eCLIP11.84□□□□□ -0.51
CAPRIN1-201ENST00000341394 SLF2Q8IX21 1173 aa11.84□□□□□ -0.51
CAPRIN1-201ENST00000341394 ZSCAN16Q9H4T2 348 aaPredicted RBP11.84□□□□□ -0.51
CAPRIN1-201ENST00000341394 NEDD4P46934 1319 aa11.84□□□□□ -0.51
CAPRIN1-201ENST00000341394 ADAMTSL1Q8N6G6 1762 aa11.84□□□□□ -0.51
CAPRIN1-201ENST00000341394 ADD1P35611 737 aaKnown RBP11.84□□□□□ -0.51
CAPRIN1-201ENST00000341394 CCDC144BQ3MJ40 725 aa11.84□□□□□ -0.51
CAPRIN1-201ENST00000341394 RRAGBQ5VZM2 374 aa11.84□□□□□ -0.51
CAPRIN1-201ENST00000341394 TTLL6Q8N841 843 aa11.84□□□□□ -0.51
CAPRIN1-201ENST00000341394 AIFM3Q96NN9 605 aa11.84□□□□□ -0.51
CAPRIN1-201ENST00000341394 UBA5Q9GZZ9 404 aa11.84□□□□□ -0.51
CAPRIN1-201ENST00000341394 MCM9Q9NXL9 1143 aa11.84□□□□□ -0.51
CAPRIN1-201ENST00000341394 TXLNAP40222 546 aa11.84□□□□□ -0.51
CAPRIN1-201ENST00000341394 EXOSC10Q01780 885 aaKnown RBP11.84□□□□□ -0.51
CAPRIN1-201ENST00000341394 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.84□□□□□ -0.51
CAPRIN1-201ENST00000341394 CDK5RAP2Q96SN8 1893 aa11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 KLRG2A4D1S0 409 aaPredicted RBP11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 PPIP5K2O43314 1243 aa11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 SSRP1Q08945 709 aaKnown RBP11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 DPCR1Q3MIW9 517 aa11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 SLC16A10Q8TF71 515 aa11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 KIF2AO00139 706 aaPredicted RBP11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 ZNF202O95125 648 aa11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 ATP1A3P13637 1013 aa11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 OAS2P29728 719 aaKnown RBP11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 CYB5R4Q7L1T6 521 aa11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 TDRD7Q8NHU6 1098 aaKnown RBP11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 TBC1D22AQ8WUA7 517 aa11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 PCNTO95613 3336 aa11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 MACROD2A1Z1Q3 448 aa11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 POLR2DO15514 142 aaKnown RBP11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 DMTNQ08495 405 aa11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 WWC2Q6AWC2 1192 aa11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 LRRC8AQ8IWT6 810 aa11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 GRAMD1CQ8IYS0 662 aa11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 ZNF526Q8TF50 670 aaPredicted RBP11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 NSUN4Q96CB9 384 aaKnown RBP11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 RIOK1Q9BRS2 568 aaKnown RBP11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 RNF41Q9H4P4 317 aaPredicted RBP11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 MMRN2Q9H8L6 949 aa11.83□□□□□ -0.52
CAPRIN1-201ENST00000341394 USP17L12C9JPN9 530 aa11.82□□□□□ -0.52
CAPRIN1-201ENST00000341394 USP17L21D6R901 530 aa11.82□□□□□ -0.52
CAPRIN1-201ENST00000341394 NDUFA8P51970 172 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms