RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 TMEM232C9JQI7 657 aa17.85■□□□□ 0.45
NPHP3-201ENST00000337331 GCFC2P16383 781 aaKnown RBP17.85■□□□□ 0.45
NPHP3-201ENST00000337331 GSPT2Q8IYD1 628 aaKnown RBP17.85■□□□□ 0.45
NPHP3-201ENST00000337331 LRRIQ1Q96JM4 1722 aa17.85■□□□□ 0.45
NPHP3-201ENST00000337331 TSPOAP1O95153 1857 aa17.85■□□□□ 0.45
NPHP3-201ENST00000337331 KRT13P13646 458 aa17.84■□□□□ 0.45
NPHP3-201ENST00000337331 HIBCHQ6NVY1 386 aaPredicted RBP17.84■□□□□ 0.45
NPHP3-201ENST00000337331 ZNF827Q17R98 1081 aa17.84■□□□□ 0.45
NPHP3-201ENST00000337331 CCDC170Q8IYT3 715 aa17.84■□□□□ 0.45
NPHP3-201ENST00000337331 CDC42BPAQ5VT25 1732 aa17.84■□□□□ 0.45
NPHP3-201ENST00000337331 TLDC2A0PJX2 215 aa17.84■□□□□ 0.45
NPHP3-201ENST00000337331 TRAF5O00463 557 aa17.84■□□□□ 0.45
NPHP3-201ENST00000337331 CHRM1P11229 460 aaPredicted RBP17.84■□□□□ 0.45
NPHP3-201ENST00000337331 REXO1L1PQ8IX06 675 aa17.84■□□□□ 0.45
NPHP3-201ENST00000337331 SELENOSQ9BQE4 189 aa17.84■□□□□ 0.45
NPHP3-201ENST00000337331 PLVAPQ9BX97 442 aa17.84■□□□□ 0.45
NPHP3-201ENST00000337331 NYXQ9GZU5 481 aa17.84■□□□□ 0.45
NPHP3-201ENST00000337331 DENND2AQ9ULE3 1009 aa17.84■□□□□ 0.45
NPHP3-201ENST00000337331 SPDYE3A6NKU9 549 aa17.84■□□□□ 0.45
NPHP3-201ENST00000337331 PFKFB1P16118 471 aa17.84■□□□□ 0.45
NPHP3-201ENST00000337331 PLCG2P16885 1265 aa17.84■□□□□ 0.45
NPHP3-201ENST00000337331 HSPA2P54652 639 aa17.84■□□□□ 0.45
NPHP3-201ENST00000337331 VSTM4Q8IW00 320 aa17.84■□□□□ 0.45
NPHP3-201ENST00000337331 LPIN2Q92539 896 aa17.84■□□□□ 0.45
NPHP3-201ENST00000337331 LTKP29376 864 aa17.83■□□□□ 0.45
NPHP3-201ENST00000337331 ADD1P35611 737 aaKnown RBP17.83■□□□□ 0.45
NPHP3-201ENST00000337331 RNASE9P60153 205 aaKnown RBP17.83■□□□□ 0.45
NPHP3-201ENST00000337331 PDE4DQ08499 809 aa17.83■□□□□ 0.45
NPHP3-201ENST00000337331 TTC38Q5R3I4 469 aa17.83■□□□□ 0.45
NPHP3-201ENST00000337331 C8orf74Q6P047 294 aa17.83■□□□□ 0.45
NPHP3-201ENST00000337331 GIGYF2Q6Y7W6 1299 aaKnown RBP17.83■□□□□ 0.45
NPHP3-201ENST00000337331 HS2ST1Q7LGA3 356 aa17.83■□□□□ 0.45
NPHP3-201ENST00000337331 TMTC1Q8IUR5 882 aa17.83■□□□□ 0.45
NPHP3-201ENST00000337331 CACNA2D3Q8IZS8 1091 aa17.83■□□□□ 0.45
NPHP3-201ENST00000337331 NOC4LQ9BVI4 516 aaKnown RBP17.83■□□□□ 0.45
NPHP3-201ENST00000337331 BTG4Q9NY30 223 aa17.83■□□□□ 0.45
NPHP3-201ENST00000337331 TPX2Q9ULW0 747 aaKnown RBP17.83■□□□□ 0.45
NPHP3-201ENST00000337331 CCDC155Q8N6L0 562 aa17.83■□□□□ 0.44
NPHP3-201ENST00000337331 THOC1Q96FV9 657 aaKnown RBP17.83■□□□□ 0.44
NPHP3-201ENST00000337331 RCOR1Q9UKL0 485 aa17.83■□□□□ 0.44
NPHP3-201ENST00000337331 MRPS25P82663 173 aaKnown RBP17.83■□□□□ 0.44
NPHP3-201ENST00000337331 MXRA7P84157 204 aa17.83■□□□□ 0.44
NPHP3-201ENST00000337331 POSTNQ15063 836 aa17.83■□□□□ 0.44
NPHP3-201ENST00000337331 RNF217Q8TC41 542 aa17.83■□□□□ 0.44
NPHP3-201ENST00000337331 SMIM23A6NLE4 172 aa17.82■□□□□ 0.44
NPHP3-201ENST00000337331 GUCY2FP51841 1108 aa17.82■□□□□ 0.44
NPHP3-201ENST00000337331 CCDC6Q16204 474 aa17.82■□□□□ 0.44
NPHP3-201ENST00000337331 TTC14Q96N46 770 aa17.82■□□□□ 0.44
NPHP3-201ENST00000337331 SYNRGQ9UMZ2 1314 aa17.82■□□□□ 0.44
NPHP3-201ENST00000337331 MMP14P50281 582 aa17.82■□□□□ 0.44
NPHP3-201ENST00000337331 PLCD1P51178 756 aa17.82■□□□□ 0.44
NPHP3-201ENST00000337331 CSGALNACT2Q8N6G5 542 aa17.82■□□□□ 0.44
NPHP3-201ENST00000337331 BICD1Q96G01 975 aa17.82■□□□□ 0.44
NPHP3-201ENST00000337331 STK38LQ9Y2H1 464 aa17.82■□□□□ 0.44
NPHP3-201ENST00000337331 KDM5AP29375 1690 aaKnown RBP17.82■□□□□ 0.44
NPHP3-201ENST00000337331 LACTBP83111 547 aaPredicted RBP17.82■□□□□ 0.44
NPHP3-201ENST00000337331 TRAF1Q13077 416 aa17.82■□□□□ 0.44
NPHP3-201ENST00000337331 CYP26C1Q6V0L0 522 aa17.82■□□□□ 0.44
NPHP3-201ENST00000337331 ACRBPQ8NEB7 543 aa17.82■□□□□ 0.44
NPHP3-201ENST00000337331 ZNF274Q96GC6 653 aaPredicted RBP17.82■□□□□ 0.44
NPHP3-201ENST00000337331 HSPD1P10809 573 aaKnown RBP17.82■□□□□ 0.44
NPHP3-201ENST00000337331 IRAK1P51617 712 aa17.82■□□□□ 0.44
NPHP3-201ENST00000337331 MYO1EQ12965 1108 aa17.82■□□□□ 0.44
NPHP3-201ENST00000337331 GNPTABQ3T906 1256 aa17.82■□□□□ 0.44
NPHP3-201ENST00000337331 LMNTD2Q8IXW0 634 aa17.82■□□□□ 0.44
NPHP3-201ENST00000337331 CARD10Q9BWT7 1032 aa17.82■□□□□ 0.44
NPHP3-201ENST00000337331 ANKRD2Q9GZV1 360 aa17.82■□□□□ 0.44
NPHP3-201ENST00000337331 GOLPH3LQ9H4A5 285 aa17.82■□□□□ 0.44
NPHP3-201ENST00000337331 RTCBQ9Y3I0 505 aaKnown RBP17.82■□□□□ 0.44
NPHP3-201ENST00000337331 VIMP08670 466 aaKnown RBP17.81■□□□□ 0.44
NPHP3-201ENST00000337331 FAM43BQ6ZT52 329 aaPredicted RBP17.81■□□□□ 0.44
NPHP3-201ENST00000337331 SV2BQ7L1I2 683 aa17.81■□□□□ 0.44
NPHP3-201ENST00000337331 MAP4K1Q92918 833 aa17.81■□□□□ 0.44
NPHP3-201ENST00000337331 SAMD15Q9P1V8 674 aa17.81■□□□□ 0.44
NPHP3-201ENST00000337331 PLXNC1O60486 1568 aa17.81■□□□□ 0.44
NPHP3-201ENST00000337331 KIF3CO14782 793 aa17.81■□□□□ 0.44
NPHP3-201ENST00000337331 PARP1P09874 1014 aaKnown RBP17.81■□□□□ 0.44
NPHP3-201ENST00000337331 BEND6Q5SZJ8 279 aaPredicted RBP17.81■□□□□ 0.44
NPHP3-201ENST00000337331 SWT1Q5T5J6 900 aaKnown RBP17.81■□□□□ 0.44
NPHP3-201ENST00000337331 ZBTB10Q96DT7 871 aa17.81■□□□□ 0.44
NPHP3-201ENST00000337331 TAB2Q9NYJ8 693 aa17.81■□□□□ 0.44
NPHP3-201ENST00000337331 SHROOM2Q13796 1616 aa17.8■□□□□ 0.44
NPHP3-201ENST00000337331 HIBADHP31937 336 aaKnown RBP17.8■□□□□ 0.44
NPHP3-201ENST00000337331 PARP10Q53GL7 1025 aa17.8■□□□□ 0.44
NPHP3-201ENST00000337331 VPS54Q9P1Q0 977 aa17.8■□□□□ 0.44
NPHP3-201ENST00000337331 SAP30BPQ9UHR5 308 aaKnown RBP17.8■□□□□ 0.44
NPHP3-201ENST00000337331 ADGBQ8N7X0 1667 aa17.8■□□□□ 0.44
NPHP3-201ENST00000337331 PROSER3Q2NL68 480 aa17.8■□□□□ 0.44
NPHP3-201ENST00000337331 TTLL7Q6ZT98 887 aa17.8■□□□□ 0.44
NPHP3-201ENST00000337331 LMBR1Q8WVP7 490 aa17.8■□□□□ 0.44
NPHP3-201ENST00000337331 DDX17Q92841 729 aaKnown RBP17.8■□□□□ 0.44
NPHP3-201ENST00000337331 MEFVO15553 781 aaPredicted RBP17.8■□□□□ 0.44
NPHP3-201ENST00000337331 PAK1Q13153 545 aa17.8■□□□□ 0.44
NPHP3-201ENST00000337331 PFKFB2O60825 505 aa17.79■□□□□ 0.44
NPHP3-201ENST00000337331 RANBP1P43487 201 aa17.79■□□□□ 0.44
NPHP3-201ENST00000337331 RESTQ13127 1097 aa17.79■□□□□ 0.44
NPHP3-201ENST00000337331 AKNAD1Q5T1N1 836 aa17.79■□□□□ 0.44
NPHP3-201ENST00000337331 CAPRIN2Q6IMN6 1127 aaKnown RBP17.79■□□□□ 0.44
NPHP3-201ENST00000337331 SPATA5Q8NB90 893 aa17.79■□□□□ 0.44
NPHP3-201ENST00000337331 JAKMIP2Q96AA8 810 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms