RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 NPLOC4Q8TAT6 608 aa29.47■■■□□ 2.31
CDKN3-202ENST00000335183 BOLA2Q9H3K6 86 aa29.47■■■□□ 2.31
CDKN3-202ENST00000335183 A0A0G2JMZ2 1700 aa29.46■■■□□ 2.31
CDKN3-202ENST00000335183 COG2Q14746 738 aa29.46■■■□□ 2.31
CDKN3-202ENST00000335183 DYNLL2Q96FJ2 89 aa29.46■■■□□ 2.31
CDKN3-202ENST00000335183 PAG1Q9NWQ8 432 aa29.46■■■□□ 2.31
CDKN3-202ENST00000335183 RAB11FIP3O75154 756 aa29.45■■■□□ 2.31
CDKN3-202ENST00000335183 LRRC26Q2I0M4 334 aa29.45■■■□□ 2.31
CDKN3-202ENST00000335183 SLFNL1Q499Z3 407 aa29.45■■■□□ 2.31
CDKN3-202ENST00000335183 TMEM179Q6ZVK1 233 aa29.45■■■□□ 2.31
CDKN3-202ENST00000335183 ZBTB40Q9NUA8 1239 aa29.45■■■□□ 2.31
CDKN3-202ENST00000335183 SWAP70Q9UH65 585 aa29.45■■■□□ 2.31
CDKN3-202ENST00000335183 ZNF236Q9UL36 1845 aa29.44■■■□□ 2.3
CDKN3-202ENST00000335183 PRKAB2O43741 272 aa29.44■■■□□ 2.3
CDKN3-202ENST00000335183 MBD4O95243 580 aa29.44■■■□□ 2.3
CDKN3-202ENST00000335183 HOXC6P09630 235 aa29.44■■■□□ 2.3
CDKN3-202ENST00000335183 CYP2C19P33261 490 aa29.44■■■□□ 2.3
CDKN3-202ENST00000335183 UBE2OQ9C0C9 1292 aaKnown RBP29.44■■■□□ 2.3
CDKN3-202ENST00000335183 HOXC10Q9NYD6 342 aa29.44■■■□□ 2.3
CDKN3-202ENST00000335183 DDX20Q9UHI6 824 aaKnown RBP29.44■■■□□ 2.3
CDKN3-202ENST00000335183 PARP14Q460N5 1801 aa29.43■■■□□ 2.3
CDKN3-202ENST00000335183 ADD2P35612 726 aa29.43■■■□□ 2.3
CDKN3-202ENST00000335183 DPP9Q86TI2 863 aa29.43■■■□□ 2.3
CDKN3-202ENST00000335183 CLEC10AQ8IUN9 316 aa29.43■■■□□ 2.3
CDKN3-202ENST00000335183 MOV10L1Q9BXT6 1211 aaKnown RBP29.43■■■□□ 2.3
CDKN3-202ENST00000335183 AKR1B1P15121 316 aa29.42■■■□□ 2.3
CDKN3-202ENST00000335183 TDHQ8IZJ6 230 aa29.42■■■□□ 2.3
CDKN3-202ENST00000335183 SENP6Q9GZR1 1112 aaPredicted RBP29.42■■■□□ 2.3
CDKN3-202ENST00000335183 ARHGEF10LQ9HCE6 1279 aa29.42■■■□□ 2.3
CDKN3-202ENST00000335183 ZNFX1Q9P2E3 1918 aaKnown RBP29.41■■■□□ 2.3
CDKN3-202ENST00000335183 COL11A1P12107 1806 aaPredicted RBP29.41■■■□□ 2.3
CDKN3-202ENST00000335183 MSCO60682 206 aa29.41■■■□□ 2.3
CDKN3-202ENST00000335183 ADORA2AP29274 412 aa29.41■■■□□ 2.3
CDKN3-202ENST00000335183 PLS1Q14651 629 aa29.41■■■□□ 2.3
CDKN3-202ENST00000335183 KIAA1755Q5JYT7 1200 aa29.41■■■□□ 2.3
CDKN3-202ENST00000335183 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.41■■■□□ 2.3
CDKN3-202ENST00000335183 SPATC1LQ9H0A9 340 aa29.41■■■□□ 2.3
CDKN3-202ENST00000335183 ATP8A2Q9NTI2 1148 aa29.41■■■□□ 2.3
CDKN3-202ENST00000335183 ERCC3P19447 782 aa29.4■■■□□ 2.3
CDKN3-202ENST00000335183 ICA1Q05084 483 aa29.4■■■□□ 2.3
CDKN3-202ENST00000335183 SAMD1Q6SPF0 538 aaPredicted RBP29.4■■■□□ 2.3
CDKN3-202ENST00000335183 SPICE1Q8N0Z3 855 aa29.4■■■□□ 2.3
CDKN3-202ENST00000335183 CYP2D7A0A087X1C5 515 aa29.39■■■□□ 2.3
CDKN3-202ENST00000335183 FLOT1O75955 427 aa29.39■■■□□ 2.3
CDKN3-202ENST00000335183 ATP5JP18859 108 aa29.39■■■□□ 2.3
CDKN3-202ENST00000335183 DSG3P32926 999 aa29.39■■■□□ 2.3
CDKN3-202ENST00000335183 AMOTL1Q8IY63 956 aa29.39■■■□□ 2.3
CDKN3-202ENST00000335183 TRPV1Q8NER1 839 aa29.39■■■□□ 2.3
CDKN3-202ENST00000335183 LPAR1Q92633 364 aa29.39■■■□□ 2.3
CDKN3-202ENST00000335183 STRNO43815 780 aa29.38■■■□□ 2.29
CDKN3-202ENST00000335183 CHGBP05060 677 aa29.38■■■□□ 2.29
CDKN3-202ENST00000335183 MDM2Q00987 491 aaPredicted RBP29.38■■■□□ 2.29
CDKN3-202ENST00000335183 LRIT3Q3SXY7 679 aa29.38■■■□□ 2.29
CDKN3-202ENST00000335183 SHCBP1Q8NEM2 672 aa29.38■■■□□ 2.29
CDKN3-202ENST00000335183 HAUS7Q99871 368 aa29.38■■■□□ 2.29
CDKN3-202ENST00000335183 CHMP4BQ9H444 224 aaKnown RBP29.38■■■□□ 2.29
CDKN3-202ENST00000335183 SH2D4AQ9H788 454 aa29.38■■■□□ 2.29
CDKN3-202ENST00000335183 SMIM22K7EJ46 135 aa29.37■■■□□ 2.29
CDKN3-202ENST00000335183 CYBAP13498 195 aa29.37■■■□□ 2.29
CDKN3-202ENST00000335183 CDK8P49336 464 aa29.37■■■□□ 2.29
CDKN3-202ENST00000335183 ATN1P54259 1190 aaPredicted RBP29.37■■■□□ 2.29
CDKN3-202ENST00000335183 NCAPG2Q86XI2 1143 aa29.37■■■□□ 2.29
CDKN3-202ENST00000335183 MB21D1Q8N884 522 aa29.37■■■□□ 2.29
CDKN3-202ENST00000335183 ATG4CQ96DT6 458 aa29.37■■■□□ 2.29
CDKN3-202ENST00000335183 DDRGK1Q96HY6 314 aa29.37■■■□□ 2.29
CDKN3-202ENST00000335183 VCPKMTQ9H867 229 aa29.37■■■□□ 2.29
CDKN3-202ENST00000335183 TMX2Q9Y320 296 aa29.37■■■□□ 2.29
CDKN3-202ENST00000335183 USP17L12C9JPN9 530 aa29.36■■■□□ 2.29
CDKN3-202ENST00000335183 USP17L21D6R901 530 aa29.36■■■□□ 2.29
CDKN3-202ENST00000335183 C12orf60Q5U649 245 aa29.36■■■□□ 2.29
CDKN3-202ENST00000335183 SIAH1Q8IUQ4 282 aa29.36■■■□□ 2.29
CDKN3-202ENST00000335183 SLC17A8Q8NDX2 589 aa29.36■■■□□ 2.29
CDKN3-202ENST00000335183 CCDC17Q96LX7 622 aa29.36■■■□□ 2.29
CDKN3-202ENST00000335183 SLC4A4Q9Y6R1 1079 aa29.36■■■□□ 2.29
CDKN3-202ENST00000335183 OLFML2BQ68BL8 750 aa29.35■■■□□ 2.29
CDKN3-202ENST00000335183 GPR153Q6NV75 609 aa29.35■■■□□ 2.29
CDKN3-202ENST00000335183 SLC5A4Q9NY91 659 aa29.35■■■□□ 2.29
CDKN3-202ENST00000335183 LAMA3Q16787 3333 aa29.34■■■□□ 2.29
CDKN3-202ENST00000335183 DNM1LO00429 736 aa29.34■■■□□ 2.29
CDKN3-202ENST00000335183 COBLO75128 1261 aa29.34■■■□□ 2.29
CDKN3-202ENST00000335183 UBE3CQ15386 1083 aa29.34■■■□□ 2.29
CDKN3-202ENST00000335183 GJC2Q5T442 439 aaPredicted RBP29.34■■■□□ 2.29
CDKN3-202ENST00000335183 ANO1Q5XXA6 986 aa29.34■■■□□ 2.29
CDKN3-202ENST00000335183 Q7L0L9 218 aa29.34■■■□□ 2.29
CDKN3-202ENST00000335183 DEFB123Q8N688 67 aa29.34■■■□□ 2.29
CDKN3-202ENST00000335183 MROH8Q9H579 483 aa29.34■■■□□ 2.29
CDKN3-202ENST00000335183 WDR46O15213 610 aaKnown RBP29.33■■■□□ 2.29
CDKN3-202ENST00000335183 IGHA2P01877 340 aa29.33■■■□□ 2.29
CDKN3-202ENST00000335183 C16orf86Q6ZW13 317 aa29.33■■■□□ 2.29
CDKN3-202ENST00000335183 LRRCC1Q9C099 1032 aa29.33■■■□□ 2.29
CDKN3-202ENST00000335183 PLXNA1Q9UIW2 1896 aa29.33■■■□□ 2.29
CDKN3-202ENST00000335183 SMARCA5O60264 1052 aaPredicted RBP29.32■■■□□ 2.28
CDKN3-202ENST00000335183 MYCNP04198 464 aaPredicted RBP29.32■■■□□ 2.28
CDKN3-202ENST00000335183 EEF2P13639 858 aaKnown RBP29.32■■■□□ 2.28
CDKN3-202ENST00000335183 ZSCAN25Q6NSZ9 544 aa29.32■■■□□ 2.28
CDKN3-202ENST00000335183 RCAN3Q9UKA8 241 aa29.32■■■□□ 2.28
CDKN3-202ENST00000335183 RAD21O60216 631 aa29.31■■■□□ 2.28
CDKN3-202ENST00000335183 ARRDC4Q8NCT1 418 aa29.31■■■□□ 2.28
CDKN3-202ENST00000335183 LBHD1Q9BQE6 289 aaPredicted RBP29.31■■■□□ 2.28
CDKN3-202ENST00000335183 PUS7LQ9H0K6 701 aaKnown RBP29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms