RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 PAPD7Q5XG87 772 aaKnown RBP18.33■□□□□ 0.53
UPK3B-202ENST00000334348 MCTP2Q6DN12 878 aa18.33■□□□□ 0.53
UPK3B-202ENST00000334348 NBPF10Q6P3W6 841 aaKnown RBP18.33■□□□□ 0.53
UPK3B-202ENST00000334348 NBPF15Q8N660 670 aa18.33■□□□□ 0.53
UPK3B-202ENST00000334348 MMS19Q96T76 1030 aa18.33■□□□□ 0.53
UPK3B-202ENST00000334348 GUCA1BQ9UMX6 200 aa18.33■□□□□ 0.53
UPK3B-202ENST00000334348 REXO2Q9Y3B8 237 aaKnown RBP18.33■□□□□ 0.53
UPK3B-202ENST00000334348 SAR1BQ9Y6B6 198 aa18.33■□□□□ 0.53
UPK3B-202ENST00000334348 EXOC5O00471 708 aa18.33■□□□□ 0.52
UPK3B-202ENST00000334348 NDUFA10O95299 355 aa18.33■□□□□ 0.52
UPK3B-202ENST00000334348 CDC25AP30304 524 aa18.33■□□□□ 0.52
UPK3B-202ENST00000334348 KRT9P35527 623 aa18.33■□□□□ 0.52
UPK3B-202ENST00000334348 SPAG1Q07617 926 aa18.33■□□□□ 0.52
UPK3B-202ENST00000334348 TTLL7Q6ZT98 887 aa18.33■□□□□ 0.52
UPK3B-202ENST00000334348 SMYD4Q8IYR2 804 aaPredicted RBP18.33■□□□□ 0.52
UPK3B-202ENST00000334348 FAM76AQ8TAV0 307 aa18.33■□□□□ 0.52
UPK3B-202ENST00000334348 DCAF5Q96JK2 942 aa18.33■□□□□ 0.52
UPK3B-202ENST00000334348 CEP89Q96ST8 783 aa18.33■□□□□ 0.52
UPK3B-202ENST00000334348 CRACR2AQ9BSW2 395 aa18.33■□□□□ 0.52
UPK3B-202ENST00000334348 TOMM22Q9NS69 142 aa18.33■□□□□ 0.52
UPK3B-202ENST00000334348 AGPSO00116 658 aa18.32■□□□□ 0.52
UPK3B-202ENST00000334348 IFIT3O14879 490 aaKnown RBP18.32■□□□□ 0.52
UPK3B-202ENST00000334348 CKAP4Q07065 602 aaKnown RBP18.32■□□□□ 0.52
UPK3B-202ENST00000334348 RIN2Q8WYP3 895 aaPredicted RBP18.32■□□□□ 0.52
UPK3B-202ENST00000334348 BCL9LQ86UU0 1499 aa18.32■□□□□ 0.52
UPK3B-202ENST00000334348 DEXIO95424 95 aa18.32■□□□□ 0.52
UPK3B-202ENST00000334348 COPB1P53618 953 aaKnown RBP18.32■□□□□ 0.52
UPK3B-202ENST00000334348 UBE3CQ15386 1083 aa18.32■□□□□ 0.52
UPK3B-202ENST00000334348 EPSTI1Q96J88 318 aa18.32■□□□□ 0.52
UPK3B-202ENST00000334348 HDAC6Q9UBN7 1215 aa18.32■□□□□ 0.52
UPK3B-202ENST00000334348 CTNND2Q9UQB3 1225 aa18.32■□□□□ 0.52
UPK3B-202ENST00000334348 ERLIN2O94905 339 aa18.31■□□□□ 0.52
UPK3B-202ENST00000334348 CASP1P29466 404 aa18.31■□□□□ 0.52
UPK3B-202ENST00000334348 IRAK1P51617 712 aa18.31■□□□□ 0.52
UPK3B-202ENST00000334348 CCNI2Q6ZMN8 369 aaPredicted RBP18.31■□□□□ 0.52
UPK3B-202ENST00000334348 CHP1Q99653 195 aa18.31■□□□□ 0.52
UPK3B-202ENST00000334348 KAT14Q9H8E8 782 aa18.31■□□□□ 0.52
UPK3B-202ENST00000334348 CABP5Q9NP86 173 aa18.31■□□□□ 0.52
UPK3B-202ENST00000334348 RNF216Q9NWF9 866 aaPredicted RBP18.31■□□□□ 0.52
UPK3B-202ENST00000334348 ZSWIM5Q9P217 1185 aa18.31■□□□□ 0.52
UPK3B-202ENST00000334348 TRIM10Q9UDY6 481 aa18.31■□□□□ 0.52
UPK3B-202ENST00000334348 ATP1A1P05023 1023 aaKnown RBP18.31■□□□□ 0.52
UPK3B-202ENST00000334348 MCAMP43121 646 aa18.31■□□□□ 0.52
UPK3B-202ENST00000334348 ALX1Q15699 326 aa18.31■□□□□ 0.52
UPK3B-202ENST00000334348 VPS16Q9H269 839 aa18.31■□□□□ 0.52
UPK3B-202ENST00000334348 TJP1Q07157 1748 aa18.3■□□□□ 0.52
UPK3B-202ENST00000334348 EBAG9O00559 213 aa18.3■□□□□ 0.52
UPK3B-202ENST00000334348 ENC1O14682 589 aa18.3■□□□□ 0.52
UPK3B-202ENST00000334348 TTF1Q15361 905 aaPredicted RBP18.3■□□□□ 0.52
UPK3B-202ENST00000334348 RTN1Q16799 776 aa18.3■□□□□ 0.52
UPK3B-202ENST00000334348 ZNF662Q6ZS27 426 aa18.3■□□□□ 0.52
UPK3B-202ENST00000334348 ANKRD20A12PQ8NF67 263 aa18.3■□□□□ 0.52
UPK3B-202ENST00000334348 OXER1Q8TDS5 423 aa18.3■□□□□ 0.52
UPK3B-202ENST00000334348 SELENOOQ9BVL4 669 aa18.3■□□□□ 0.52
UPK3B-202ENST00000334348 RWDD2AQ9UIY3 292 aa18.3■□□□□ 0.52
UPK3B-202ENST00000334348 GOLGA6CA6NDK9 693 aa18.3■□□□□ 0.52
UPK3B-202ENST00000334348 TRIM75PA6NK02 468 aa18.3■□□□□ 0.52
UPK3B-202ENST00000334348 GOLGA6DP0CG33 693 aa18.3■□□□□ 0.52
UPK3B-202ENST00000334348 CSB-PGBD3P0DP91 1061 aa18.3■□□□□ 0.52
UPK3B-202ENST00000334348 CCT5P48643 541 aa18.3■□□□□ 0.52
UPK3B-202ENST00000334348 EVA1CP58658 441 aa18.3■□□□□ 0.52
UPK3B-202ENST00000334348 PPFIA1Q13136 1202 aa18.3■□□□□ 0.52
UPK3B-202ENST00000334348 CRACR2BQ8N4Y2 399 aaPredicted RBP18.3■□□□□ 0.52
UPK3B-202ENST00000334348 INCENPQ9NQS7 918 aa18.3■□□□□ 0.52
UPK3B-202ENST00000334348 GOLGA6AQ9NYA3 693 aa18.3■□□□□ 0.52
UPK3B-202ENST00000334348 LOC102724159A0A0B4J2E5 919 aa18.29■□□□□ 0.52
UPK3B-202ENST00000334348 SART3Q15020 963 aaKnown RBP18.29■□□□□ 0.52
UPK3B-202ENST00000334348 PWP2Q15269 919 aaKnown RBP18.29■□□□□ 0.52
UPK3B-202ENST00000334348 TCP11X2Q5H9J9 407 aa18.29■□□□□ 0.52
UPK3B-202ENST00000334348 CCDC91Q7Z6B0 441 aa18.29■□□□□ 0.52
UPK3B-202ENST00000334348 SYMPKQ92797 1274 aaKnown RBP18.29■□□□□ 0.52
UPK3B-202ENST00000334348 TAB2Q9NYJ8 693 aa18.29■□□□□ 0.52
UPK3B-202ENST00000334348 FAM169AQ9Y6X4 670 aa18.29■□□□□ 0.52
UPK3B-202ENST00000334348 COL5A2P05997 1499 aaPredicted RBP18.29■□□□□ 0.52
UPK3B-202ENST00000334348 AFF2P51816 1311 aa18.29■□□□□ 0.52
UPK3B-202ENST00000334348 MYO5AQ9Y4I1 1855 aaKnown RBP18.29■□□□□ 0.52
UPK3B-202ENST00000334348 SRGAP2O75044 1071 aa18.28■□□□□ 0.52
UPK3B-202ENST00000334348 SKIDA1Q1XH10 827 aa18.28■□□□□ 0.52
UPK3B-202ENST00000334348 GBP6Q6ZN66 633 aa18.28■□□□□ 0.52
UPK3B-202ENST00000334348 EHBP1Q8NDI1 1231 aa18.28■□□□□ 0.52
UPK3B-202ENST00000334348 OR8K1Q8NGG5 319 aa18.28■□□□□ 0.52
UPK3B-202ENST00000334348 ZNF512BQ96KM6 892 aaPredicted RBP18.28■□□□□ 0.52
UPK3B-202ENST00000334348 NLRP2Q9NX02 1062 aa18.28■□□□□ 0.52
UPK3B-202ENST00000334348 KAT2BQ92831 832 aa18.28■□□□□ 0.52
UPK3B-202ENST00000334348 FERMT2Q96AC1 680 aa18.28■□□□□ 0.52
UPK3B-202ENST00000334348 STRBPQ96SI9 672 aaKnown RBP18.28■□□□□ 0.52
UPK3B-202ENST00000334348 CNNM2Q9H8M5 875 aa18.28■□□□□ 0.52
UPK3B-202ENST00000334348 USP21Q9UK80 565 aa18.28■□□□□ 0.52
UPK3B-202ENST00000334348 ZNF532Q9HCE3 1301 aa18.28■□□□□ 0.52
UPK3B-202ENST00000334348 LAMB4A4D0S4 1761 aa18.27■□□□□ 0.52
UPK3B-202ENST00000334348 CCDC196A0A1B0GTZ2 297 aa18.27■□□□□ 0.52
UPK3B-202ENST00000334348 GOLGA6BA6NDN3 693 aa18.27■□□□□ 0.52
UPK3B-202ENST00000334348 KCNJ18B7U540 433 aa18.27■□□□□ 0.52
UPK3B-202ENST00000334348 MYBL2P10244 700 aa18.27■□□□□ 0.52
UPK3B-202ENST00000334348 CABP4P57796 275 aa18.27■□□□□ 0.52
UPK3B-202ENST00000334348 HERVK_113P62684 666 aa18.27■□□□□ 0.52
UPK3B-202ENST00000334348 KCNJ12Q14500 433 aa18.27■□□□□ 0.52
UPK3B-202ENST00000334348 CCDC122Q5T0U0 273 aa18.27■□□□□ 0.52
UPK3B-202ENST00000334348 GDAP1L1Q96MZ0 367 aa18.27■□□□□ 0.52
UPK3B-202ENST00000334348 CAPS2Q9BXY5 557 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms