RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 SLC39A14Q15043 492 aa19.34■□□□□ 0.69
PRKCD-201ENST00000330452 NFXL1Q6ZNB6 911 aa19.34■□□□□ 0.69
PRKCD-201ENST00000330452 TRIM74Q86UV6 250 aa19.34■□□□□ 0.69
PRKCD-201ENST00000330452 TRIM73Q86UV7 250 aa19.34■□□□□ 0.69
PRKCD-201ENST00000330452 SLC51AQ86UW1 340 aa19.34■□□□□ 0.69
PRKCD-201ENST00000330452 SNUPNO95149 360 aaKnown RBP19.33■□□□□ 0.69
PRKCD-201ENST00000330452 CMA1P23946 247 aa19.33■□□□□ 0.69
PRKCD-201ENST00000330452 ARMC3Q5W041 872 aa19.33■□□□□ 0.69
PRKCD-201ENST00000330452 MSL3Q8N5Y2 521 aaKnown RBP19.33■□□□□ 0.69
PRKCD-201ENST00000330452 IGDCC4Q8TDY8 1250 aa19.33■□□□□ 0.69
PRKCD-201ENST00000330452 PARD3BQ8TEW8 1205 aa19.33■□□□□ 0.69
PRKCD-201ENST00000330452 IL6STP40189 918 aaPredicted RBP19.33■□□□□ 0.68
PRKCD-201ENST00000330452 WLSQ5T9L3 541 aa19.33■□□□□ 0.68
PRKCD-201ENST00000330452 LINC00116Q8NCU8 138 aa19.33■□□□□ 0.68
PRKCD-201ENST00000330452 EPB41L4AQ9HCS5 686 aaPredicted RBP19.33■□□□□ 0.68
PRKCD-201ENST00000330452 TACC3Q9Y6A5 838 aa19.33■□□□□ 0.68
PRKCD-201ENST00000330452 MYH14Q7Z406 1995 aaKnown RBP19.33■□□□□ 0.68
PRKCD-201ENST00000330452 RANBP6O60518 1105 aaKnown RBP19.32■□□□□ 0.68
PRKCD-201ENST00000330452 EIF3JO75822 258 aaKnown RBP19.32■□□□□ 0.68
PRKCD-201ENST00000330452 INPP5BP32019 993 aa19.32■□□□□ 0.68
PRKCD-201ENST00000330452 ATP2B2Q01814 1243 aa19.32■□□□□ 0.68
PRKCD-201ENST00000330452 BRD3Q15059 726 aa19.32■□□□□ 0.68
PRKCD-201ENST00000330452 RBBP5Q15291 538 aaKnown RBP19.32■□□□□ 0.68
PRKCD-201ENST00000330452 RABGGTAQ92696 567 aa19.32■□□□□ 0.68
PRKCD-201ENST00000330452 XPO4Q9C0E2 1151 aaKnown RBP19.32■□□□□ 0.68
PRKCD-201ENST00000330452 KIF9Q9HAQ2 790 aa19.32■□□□□ 0.68
PRKCD-201ENST00000330452 IFNKQ9P0W0 207 aa19.32■□□□□ 0.68
PRKCD-201ENST00000330452 C4AP0C0L4 1744 aa19.32■□□□□ 0.68
PRKCD-201ENST00000330452 C4BP0C0L5 1744 aa19.32■□□□□ 0.68
PRKCD-201ENST00000330452 ATRNO75882 1429 aa19.32■□□□□ 0.68
PRKCD-201ENST00000330452 ZBTB43O43298 467 aa19.32■□□□□ 0.68
PRKCD-201ENST00000330452 GCKP35557 465 aa19.32■□□□□ 0.68
PRKCD-201ENST00000330452 GSDMDP57764 484 aa19.32■□□□□ 0.68
PRKCD-201ENST00000330452 PUM3Q15397 648 aaKnown RBP19.32■□□□□ 0.68
PRKCD-201ENST00000330452 TMEM67Q5HYA8 995 aa19.32■□□□□ 0.68
PRKCD-201ENST00000330452 TRIM65Q6PJ69 517 aa19.32■□□□□ 0.68
PRKCD-201ENST00000330452 C3orf67Q6ZVT6 689 aa19.32■□□□□ 0.68
PRKCD-201ENST00000330452 HDXQ7Z353 690 aa19.32■□□□□ 0.68
PRKCD-201ENST00000330452 MAGEB6Q8N7X4 407 aa19.32■□□□□ 0.68
PRKCD-201ENST00000330452 LY9Q9HBG7 655 aa19.32■□□□□ 0.68
PRKCD-201ENST00000330452 FAM217BQ9NTX9 383 aaPredicted RBP19.32■□□□□ 0.68
PRKCD-201ENST00000330452 NLRP12P59046 1061 aa19.31■□□□□ 0.68
PRKCD-201ENST00000330452 SNX1Q13596 522 aa19.31■□□□□ 0.68
PRKCD-201ENST00000330452 NTRK3Q16288 839 aa19.31■□□□□ 0.68
PRKCD-201ENST00000330452 SLC5A9Q2M3M2 681 aa19.31■□□□□ 0.68
PRKCD-201ENST00000330452 FAM71BQ8TC56 605 aa19.31■□□□□ 0.68
PRKCD-201ENST00000330452 FAM204AQ9H8W3 233 aa19.31■□□□□ 0.68
PRKCD-201ENST00000330452 ARMT1Q9H993 441 aa19.31■□□□□ 0.68
PRKCD-201ENST00000330452 SRP68Q9UHB9 627 aaKnown RBP19.31■□□□□ 0.68
PRKCD-201ENST00000330452 DDX60Q8IY21 1712 aaKnown RBP19.31■□□□□ 0.68
PRKCD-201ENST00000330452 GOLGA8AA7E2F4 631 aa19.31■□□□□ 0.68
PRKCD-201ENST00000330452 SKAP2O75563 359 aaPredicted RBP19.31■□□□□ 0.68
PRKCD-201ENST00000330452 MBD4O95243 580 aa19.31■□□□□ 0.68
PRKCD-201ENST00000330452 UQCRFS1P1P0C7P4 283 aa19.31■□□□□ 0.68
PRKCD-201ENST00000330452 BEND6Q5SZJ8 279 aaPredicted RBP19.31■□□□□ 0.68
PRKCD-201ENST00000330452 SHC4Q6S5L8 630 aa19.31■□□□□ 0.68
PRKCD-201ENST00000330452 STK11IPQ8N1F8 1099 aa19.31■□□□□ 0.68
PRKCD-201ENST00000330452 SPATA5Q8NB90 893 aa19.31■□□□□ 0.68
PRKCD-201ENST00000330452 LPIN2Q92539 896 aa19.31■□□□□ 0.68
PRKCD-201ENST00000330452 A0A1B0GUA9 196 aa19.3■□□□□ 0.68
PRKCD-201ENST00000330452 FRMD3A2A2Y4 597 aa19.3■□□□□ 0.68
PRKCD-201ENST00000330452 PHACTR2O75167 634 aa19.3■□□□□ 0.68
PRKCD-201ENST00000330452 CDKL5O76039 1030 aa19.3■□□□□ 0.68
PRKCD-201ENST00000330452 FGFR2P21802 821 aa19.3■□□□□ 0.68
PRKCD-201ENST00000330452 IARSP41252 1262 aaKnown RBP19.3■□□□□ 0.68
PRKCD-201ENST00000330452 SYKP43405 635 aa19.3■□□□□ 0.68
PRKCD-201ENST00000330452 CLNS1AP54105 237 aaKnown RBP19.3■□□□□ 0.68
PRKCD-201ENST00000330452 RASGRF1Q13972 1273 aa19.3■□□□□ 0.68
PRKCD-201ENST00000330452 IFNL3Q8IZI9 196 aa19.3■□□□□ 0.68
PRKCD-201ENST00000330452 ZSWIM5Q9P217 1185 aa19.3■□□□□ 0.68
PRKCD-201ENST00000330452 USP21Q9UK80 565 aa19.3■□□□□ 0.68
PRKCD-201ENST00000330452 PRKAB2O43741 272 aa19.3■□□□□ 0.68
PRKCD-201ENST00000330452 CAMTA2O94983 1202 aa19.3■□□□□ 0.68
PRKCD-201ENST00000330452 NCAPHQ15003 741 aa19.3■□□□□ 0.68
PRKCD-201ENST00000330452 PTPAQ15257 358 aa19.3■□□□□ 0.68
PRKCD-201ENST00000330452 TMEM87BQ96K49 555 aa19.3■□□□□ 0.68
PRKCD-201ENST00000330452 NAPBQ9H115 298 aa19.3■□□□□ 0.68
PRKCD-201ENST00000330452 ACBD3Q9H3P7 528 aa19.3■□□□□ 0.68
PRKCD-201ENST00000330452 CAPN7Q9Y6W3 813 aa19.3■□□□□ 0.68
PRKCD-201ENST00000330452 MYO1FO00160 1098 aa19.29■□□□□ 0.68
PRKCD-201ENST00000330452 KCNJ6P48051 423 aa19.29■□□□□ 0.68
PRKCD-201ENST00000330452 TMC6Q7Z403 805 aa19.29■□□□□ 0.68
PRKCD-201ENST00000330452 ZNF34Q8IZ26 560 aa19.29■□□□□ 0.68
PRKCD-201ENST00000330452 BPIFA3Q9BQP9 254 aa19.29■□□□□ 0.68
PRKCD-201ENST00000330452 SLC26A6Q9BXS9 759 aa19.29■□□□□ 0.68
PRKCD-201ENST00000330452 IFIT3O14879 490 aaKnown RBP19.29■□□□□ 0.68
PRKCD-201ENST00000330452 LMOD1P29536 600 aaPredicted RBP19.29■□□□□ 0.68
PRKCD-201ENST00000330452 CCT5P48643 541 aa19.29■□□□□ 0.68
PRKCD-201ENST00000330452 MAP3K14Q99558 947 aa19.29■□□□□ 0.68
PRKCD-201ENST00000330452 FNTAP49354 379 aa19.28■□□□□ 0.68
PRKCD-201ENST00000330452 HNRNPLLQ8WVV9 542 aaKnown RBP19.28■□□□□ 0.68
PRKCD-201ENST00000330452 ZKSCAN3Q9BRR0 538 aa19.28■□□□□ 0.68
PRKCD-201ENST00000330452 OSBPL5Q9H0X9 879 aaPredicted RBP19.28■□□□□ 0.68
PRKCD-201ENST00000330452 EBAG9O00559 213 aa19.28■□□□□ 0.68
PRKCD-201ENST00000330452 PNOCQ13519 176 aa19.28■□□□□ 0.68
PRKCD-201ENST00000330452 RRP12Q5JTH9 1297 aaKnown RBP19.28■□□□□ 0.68
PRKCD-201ENST00000330452 LRP6O75581 1613 aa19.28■□□□□ 0.68
PRKCD-201ENST00000330452 COL22A1Q8NFW1 1626 aaPredicted RBP19.28■□□□□ 0.68
PRKCD-201ENST00000330452 ATP1A3P13637 1013 aa19.28■□□□□ 0.68
PRKCD-201ENST00000330452 PECAM1P16284 738 aaPredicted RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms