RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 MAGEA9P43362 315 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 TDO2P48775 406 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 KRT28Q7Z3Y7 464 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 FBXL16Q8N461 479 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 MMS19Q96T76 1030 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 PSMB7Q99436 277 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 CRACR2AQ9BSW2 395 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 TTF2Q9UNY4 1162 aaKnown RBP8.89□□□□□ -0.99
VMA21-201ENST00000330374 AFDNP55196 1824 aaKnown RBP8.89□□□□□ -0.99
VMA21-201ENST00000330374 MYH8P13535 1937 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 MARF1Q9Y4F3 1742 aaKnown RBP8.89□□□□□ -0.99
VMA21-201ENST00000330374 MBD4O95243 580 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 CCT5P48643 541 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 SARSP49591 514 aaKnown RBP8.89□□□□□ -0.99
VMA21-201ENST00000330374 UBXN1Q04323 297 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 KRT31Q15323 416 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 MIGA1Q8NAN2 632 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 PAGE5Q96GU1 130 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 MINDY4BA8MYZ0 360 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 ZNF185O15231 689 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 ADD2P35612 726 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 PHKA1P46020 1223 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 RILPL1Q5EBL4 403 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 EARS2Q5JPH6 523 aaKnown RBP8.89□□□□□ -0.99
VMA21-201ENST00000330374 APTXQ7Z2E3 356 aaKnown RBP8.89□□□□□ -0.99
VMA21-201ENST00000330374 ABHD10Q9NUJ1 306 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 NFAT5O94916 1531 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 WNT7AO00755 349 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 ATP1A1P05023 1023 aaKnown RBP8.89□□□□□ -0.99
VMA21-201ENST00000330374 PDE6AP16499 860 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 GGCXP38435 758 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 USP5P45974 858 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 WTAPQ15007 396 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 CCDC122Q5T0U0 273 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 MAGEB6Q8N7X4 407 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 PLIN2Q99541 437 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 GNL3LQ9NVN8 582 aaKnown RBP8.89□□□□□ -0.99
VMA21-201ENST00000330374 TBC1D2BQ9UPU7 963 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 LMO7Q8WWI1 1683 aa8.89□□□□□ -0.99
VMA21-201ENST00000330374 FAM237AA0A1B0GTK4 181 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 ERICH2A1L162 156 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 MACROD2A1Z1Q3 448 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 FMNL1O95466 1100 aaPredicted RBP8.88□□□□□ -0.99
VMA21-201ENST00000330374 IBSPP21815 317 aaPredicted RBP8.88□□□□□ -0.99
VMA21-201ENST00000330374 KIAA1328Q86T90 577 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 NAA15Q9BXJ9 866 aaKnown RBP8.88□□□□□ -0.99
VMA21-201ENST00000330374 JADE2Q9NQC1 790 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 IQSEC3Q9UPP2 1182 aaPredicted RBP8.88□□□□□ -0.99
VMA21-201ENST00000330374 TRIM75PA6NK02 468 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 SMIM22K7EJ46 135 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 ERCC5P28715 1186 aaPredicted RBP8.88□□□□□ -0.99
VMA21-201ENST00000330374 ARHGAP25P42331 645 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 STIM1Q13586 685 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 WHAMMP3Q1A5X7 153 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 MFSD6Q6ZSS7 791 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 RASSF8Q8NHQ8 419 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 DCAF5Q96JK2 942 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 TMEM87BQ96K49 555 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 SRPRBQ9Y5M8 271 aaKnown RBP8.88□□□□□ -0.99
VMA21-201ENST00000330374 LOC102724159A0A0B4J2E5 919 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 AP1G2O75843 785 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 PWP2Q15269 919 aaKnown RBP8.88□□□□□ -0.99
VMA21-201ENST00000330374 KANK3Q6NY19 840 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 CYP26C1Q6V0L0 522 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 TMTC1Q8IUR5 882 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 WASF1Q92558 559 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 SAMM50Q9Y512 469 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 TACC3Q9Y6A5 838 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 C5P01031 1676 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 KAT6BQ8WYB5 2073 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 TRIM49BA6NDI0 452 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 MYBL2P10244 700 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 C2orf54Q08AI8 447 aa8.88□□□□□ -0.99
VMA21-201ENST00000330374 EPN1Q9Y6I3 576 aaPredicted RBP8.88□□□□□ -0.99
VMA21-201ENST00000330374 ANKRD62A6NC57 917 aa8.87□□□□□ -0.99
VMA21-201ENST00000330374 SYF2O95926 243 aaKnown RBP8.87□□□□□ -0.99
VMA21-201ENST00000330374 DNA2P51530 1060 aa8.87□□□□□ -0.99
VMA21-201ENST00000330374 IFNL3Q8IZI9 196 aa8.87□□□□□ -0.99
VMA21-201ENST00000330374 IQUBQ8NA54 791 aa8.87□□□□□ -0.99
VMA21-201ENST00000330374 PPM1EQ8WY54 764 aa8.87□□□□□ -0.99
VMA21-201ENST00000330374 CTAGE1Q96RT6 745 aa8.87□□□□□ -0.99
VMA21-201ENST00000330374 DEF6Q9H4E7 631 aa8.87□□□□□ -0.99
VMA21-201ENST00000330374 MKRN1Q9UHC7 482 aaKnown RBP8.87□□□□□ -0.99
VMA21-201ENST00000330374 GDAQ9Y2T3 454 aa8.87□□□□□ -0.99
VMA21-201ENST00000330374 NWD2Q9ULI1 1742 aa8.87□□□□□ -0.99
VMA21-201ENST00000330374 COPB1P53618 953 aaKnown RBP8.87□□□□□ -0.99
VMA21-201ENST00000330374 CUL4BQ13620 913 aa8.87□□□□□ -0.99
VMA21-201ENST00000330374 TSR1Q2NL82 804 aaKnown RBP8.87□□□□□ -0.99
VMA21-201ENST00000330374 TRIML1Q8N9V2 468 aa8.87□□□□□ -0.99
VMA21-201ENST00000330374 TMC2Q8TDI7 906 aa8.87□□□□□ -0.99
VMA21-201ENST00000330374 GREM2Q9H772 168 aa8.87□□□□□ -0.99
VMA21-201ENST00000330374 EPB41L4AQ9HCS5 686 aaPredicted RBP8.87□□□□□ -0.99
VMA21-201ENST00000330374 CEP131Q9UPN4 1083 aa8.87□□□□□ -0.99
VMA21-201ENST00000330374 PPP1R3GB7ZBB8 358 aa8.87□□□□□ -0.99
VMA21-201ENST00000330374 CIAO1O76071 339 aa8.87□□□□□ -0.99
VMA21-201ENST00000330374 IFNAR1P17181 557 aa8.87□□□□□ -0.99
VMA21-201ENST00000330374 CYP27A1Q02318 531 aa8.87□□□□□ -0.99
VMA21-201ENST00000330374 PPARAQ07869 468 aa8.87□□□□□ -0.99
VMA21-201ENST00000330374 NT5DC1Q5TFE4 455 aa8.87□□□□□ -0.99
VMA21-201ENST00000330374 ANKRD20A12PQ8NF67 263 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms