RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 CFBP00751 764 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 PTGS1P23219 599 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 GUCY1A2P33402 732 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 EPHX2P34913 555 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 SLC1A4P43007 532 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 TNIP1Q15025 636 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 AKNAD1Q5T1N1 836 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 CC2D2BQ6DHV5 1058 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 ZNF70Q9UC06 446 aaPredicted RBP5.72□□□□□ -1.49
CAST-201ENST00000309190 TACC3Q9Y6A5 838 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 TIAM2Q8IVF5 1701 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 LAMB2P55268 1798 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 USP17L5A8MUK1 530 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 ZBTB43O43298 467 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 SLC3A2P08195 630 aaKnown RBP5.72□□□□□ -1.49
CAST-201ENST00000309190 LIG1P18858 919 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 HOXA10P31260 410 aaPredicted RBP5.72□□□□□ -1.49
CAST-201ENST00000309190 ANKRD7Q92527 254 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 ESR2Q92731 530 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 KCNF1Q9H3M0 494 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 ZHX3Q9H4I2 956 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 RTEL1Q9NZ71 1219 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 FLT1P17948 1338 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 COL4A1P02462 1669 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 RIC1Q4ADV7 1423 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 HIP1O00291 1037 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 HUNKP57058 714 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 TGFB2P61812 414 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 JAG1P78504 1218 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 STYK1Q6J9G0 422 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 NBPF11Q86T75 865 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 CTCFLQ8NI51 663 aaPredicted RBP5.72□□□□□ -1.49
CAST-201ENST00000309190 SMCR8Q8TEV9 937 aaPredicted RBP5.72□□□□□ -1.49
CAST-201ENST00000309190 ZNF668Q96K58 619 aaPredicted RBP5.72□□□□□ -1.49
CAST-201ENST00000309190 RTL9Q8NET4 1388 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 ITGB4P16144 1822 aa5.72□□□□□ -1.49
CAST-201ENST00000309190 WDHD1O75717 1129 aaPredicted RBP5.71□□□□□ -1.49
CAST-201ENST00000309190 FLOT1O75955 427 aa5.71□□□□□ -1.49
CAST-201ENST00000309190 PSMA5P28066 241 aa5.71□□□□□ -1.49
CAST-201ENST00000309190 ICA1Q05084 483 aa5.71□□□□□ -1.49
CAST-201ENST00000309190 NOM1Q5C9Z4 860 aaKnown RBP5.71□□□□□ -1.49
CAST-201ENST00000309190 MAEAQ7L5Y9 396 aa5.71□□□□□ -1.49
CAST-201ENST00000309190 MAP4K1Q92918 833 aa5.71□□□□□ -1.49
CAST-201ENST00000309190 GINS2Q9Y248 185 aa5.71□□□□□ -1.49
CAST-201ENST00000309190 RAD50Q92878 1312 aa5.71□□□□□ -1.49
CAST-201ENST00000309190 FAM205CA6NFA0 338 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 COBLO75128 1261 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 ALAS1P13196 640 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 ANAPC15P60006 121 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 GSTO1P78417 241 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 NR5A1Q13285 461 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 ABCB5Q2M3G0 1257 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 STRIP1Q5VSL9 837 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 PNMA1Q8ND90 353 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 PICK1Q9NRD5 415 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 KCND1Q9NSA2 647 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 RBM27Q9P2N5 1060 aaKnown RBP5.71□□□□□ -1.5
CAST-201ENST00000309190 CD2APQ9Y5K6 639 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 CHMP2AO43633 222 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 ZFYP08048 801 aaPredicted RBP5.71□□□□□ -1.5
CAST-201ENST00000309190 CYP2C8P10632 490 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 EEF2P13639 858 aaKnown RBP5.71□□□□□ -1.5
CAST-201ENST00000309190 TNNI2P48788 182 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 MTMR2Q13614 643 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 DHX32Q7L7V1 743 aaKnown RBP5.71□□□□□ -1.5
CAST-201ENST00000309190 CATIPQ7Z7H3 387 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 SUPT20HQ8NEM7 779 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 TBC1D22AQ8WUA7 517 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 LIMCH1Q9UPQ0 1083 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 MROH7-TTC4A0A0A0MT08 1334 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 CALML3P27482 149 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 ARID4AP29374 1257 aaPredicted RBP5.71□□□□□ -1.5
CAST-201ENST00000309190 CDC27P30260 824 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 FAM83BQ5T0W9 1011 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 TTC6Q86TZ1 520 aa5.71□□□□□ -1.5
CAST-201ENST00000309190 RIOK1Q9BRS2 568 aaKnown RBP5.71□□□□□ -1.5
CAST-201ENST00000309190 BIN2Q9UBW5 565 aaPredicted RBP5.71□□□□□ -1.5
CAST-201ENST00000309190 SPTBN2O15020 2390 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 PTPDC1A2A3K4 754 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 BIN1O00499 593 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 HSPA4P34932 840 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 NASPP49321 788 aaPredicted RBP5.7□□□□□ -1.5
CAST-201ENST00000309190 NLRP5P59047 1200 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 DNM1Q05193 864 aaKnown RBP5.7□□□□□ -1.5
CAST-201ENST00000309190 TRIM29Q14134 588 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 RRP1BQ14684 758 aaKnown RBP5.7□□□□□ -1.5
CAST-201ENST00000309190 NECTIN1Q15223 517 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 UBE2SQ16763 222 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 BICD2Q8TD16 824 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 C7orf43Q8WVR3 580 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 TBC1D5Q92609 795 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 PPP1R16BQ96T49 567 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 RTFDC1Q9BY42 306 aaPredicted RBP5.7□□□□□ -1.5
CAST-201ENST00000309190 FAM198AQ9UFP1 575 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 SPDYE2BA6NHP3 402 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 USP17L15C9J2P7 530 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 USP17L13C9JLJ4 530 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 USP17L11C9JVI0 530 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 USP17L18D6R9N7 530 aa5.7□□□□□ -1.5
CAST-201ENST00000309190 USP17L22D6RA61 530 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms