RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 CALM1P0DP23 149 aa12.42□□□□□ -0.42
CASP3-201ENST00000308394 CALM2P0DP24 149 aa12.42□□□□□ -0.42
CASP3-201ENST00000308394 CALM3P0DP25 149 aa12.42□□□□□ -0.42
CASP3-201ENST00000308394 AKR1B1P15121 316 aa12.42□□□□□ -0.42
CASP3-201ENST00000308394 SHMT1P34896 483 aa12.42□□□□□ -0.42
CASP3-201ENST00000308394 RCAN1P53805 252 aa12.42□□□□□ -0.42
CASP3-201ENST00000308394 TROAPQ12815 778 aa12.42□□□□□ -0.42
CASP3-201ENST00000308394 MCTP1Q6DN14 999 aa12.42□□□□□ -0.42
CASP3-201ENST00000308394 CHAMP1Q96JM3 812 aa12.42□□□□□ -0.42
CASP3-201ENST00000308394 RBM27Q9P2N5 1060 aaKnown RBP12.42□□□□□ -0.42
CASP3-201ENST00000308394 DDAH1O94760 285 aa12.42□□□□□ -0.42
CASP3-201ENST00000308394 ZNF280AP59817 542 aaPredicted RBP12.42□□□□□ -0.42
CASP3-201ENST00000308394 SSRP1Q08945 709 aaKnown RBP12.42□□□□□ -0.42
CASP3-201ENST00000308394 NTRK3Q16288 839 aa12.42□□□□□ -0.42
CASP3-201ENST00000308394 TBC1D10BQ4KMP7 808 aaPredicted RBP12.42□□□□□ -0.42
CASP3-201ENST00000308394 FERMT3Q86UX7 667 aa12.42□□□□□ -0.42
CASP3-201ENST00000308394 FOXP4Q8IVH2 680 aaPredicted RBP12.42□□□□□ -0.42
CASP3-201ENST00000308394 PNMA1Q8ND90 353 aa12.42□□□□□ -0.42
CASP3-201ENST00000308394 CTCFLQ8NI51 663 aaPredicted RBP12.42□□□□□ -0.42
CASP3-201ENST00000308394 CEP95Q96GE4 821 aa12.42□□□□□ -0.42
CASP3-201ENST00000308394 SLC26A6Q9BXS9 759 aa12.42□□□□□ -0.42
CASP3-201ENST00000308394 RNF181Q9P0P0 153 aa12.42□□□□□ -0.42
CASP3-201ENST00000308394 STK24Q9Y6E0 443 aa12.42□□□□□ -0.42
CASP3-201ENST00000308394 GOLGA6L22H0YM25 854 aa12.41□□□□□ -0.42
CASP3-201ENST00000308394 GUCY1B3Q02153 619 aa12.41□□□□□ -0.42
CASP3-201ENST00000308394 FAM151AQ8WW52 585 aa12.41□□□□□ -0.42
CASP3-201ENST00000308394 DNAJC18Q9H819 358 aa12.41□□□□□ -0.42
CASP3-201ENST00000308394 SCAF8Q9UPN6 1271 aaKnown RBP12.41□□□□□ -0.42
CASP3-201ENST00000308394 H7C1D1 291 aa12.41□□□□□ -0.42
CASP3-201ENST00000308394 PPP2R5BQ15173 497 aa12.41□□□□□ -0.42
CASP3-201ENST00000308394 CERKLQ49MI3 558 aaPredicted RBP12.41□□□□□ -0.42
CASP3-201ENST00000308394 ZBED3Q96IU2 234 aaPredicted RBP12.41□□□□□ -0.42
CASP3-201ENST00000308394 TMEM47Q9BQJ4 181 aa12.41□□□□□ -0.42
CASP3-201ENST00000308394 GPBP1L1Q9HC44 474 aaPredicted RBP12.41□□□□□ -0.42
CASP3-201ENST00000308394 PPME1Q9Y570 386 aa12.41□□□□□ -0.42
CASP3-201ENST00000308394 ATP6V1DQ9Y5K8 247 aa12.41□□□□□ -0.42
CASP3-201ENST00000308394 TESPA1A2RU30 521 aaPredicted RBP12.4□□□□□ -0.42
CASP3-201ENST00000308394 IFNAR1P17181 557 aa12.4□□□□□ -0.42
CASP3-201ENST00000308394 GPR162Q16538 588 aa12.4□□□□□ -0.42
CASP3-201ENST00000308394 CLEC17AQ6ZS10 378 aa12.4□□□□□ -0.42
CASP3-201ENST00000308394 TRIM22Q8IYM9 498 aa12.4□□□□□ -0.42
CASP3-201ENST00000308394 ANKS1AQ92625 1134 aa12.4□□□□□ -0.42
CASP3-201ENST00000308394 C8orf76Q96K31 380 aa12.4□□□□□ -0.42
CASP3-201ENST00000308394 TMEM39BQ9GZU3 492 aa12.4□□□□□ -0.42
CASP3-201ENST00000308394 RBM28Q9NW13 759 aaKnown RBP12.4□□□□□ -0.42
CASP3-201ENST00000308394 DDX11L8A8MPP1 907 aa12.4□□□□□ -0.42
CASP3-201ENST00000308394 MAP2K1Q02750 393 aaPredicted RBP12.4□□□□□ -0.42
CASP3-201ENST00000308394 NID2Q14112 1375 aa12.4□□□□□ -0.42
CASP3-201ENST00000308394 ATRNL1Q5VV63 1379 aa12.4□□□□□ -0.42
CASP3-201ENST00000308394 GPC2Q8N158 579 aa12.4□□□□□ -0.42
CASP3-201ENST00000308394 CCDC17Q96LX7 622 aa12.4□□□□□ -0.42
CASP3-201ENST00000308394 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.4□□□□□ -0.42
CASP3-201ENST00000308394 CNTNAP1P78357 1384 aa12.39□□□□□ -0.43
CASP3-201ENST00000308394 TNNI2P48788 182 aa12.39□□□□□ -0.43
CASP3-201ENST00000308394 ATP2B2Q01814 1243 aa12.39□□□□□ -0.43
CASP3-201ENST00000308394 KIF4BQ2VIQ3 1234 aa12.39□□□□□ -0.43
CASP3-201ENST00000308394 FKBP1CQ5VVH2 108 aa12.39□□□□□ -0.43
CASP3-201ENST00000308394 OTUD7BQ6GQQ9 843 aa12.39□□□□□ -0.43
CASP3-201ENST00000308394 AIFM3Q96NN9 605 aa12.39□□□□□ -0.43
CASP3-201ENST00000308394 ALG1Q9BT22 464 aa12.39□□□□□ -0.43
CASP3-201ENST00000308394 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.39□□□□□ -0.43
CASP3-201ENST00000308394 MTMR4Q9NYA4 1195 aa12.39□□□□□ -0.43
CASP3-201ENST00000308394 PLEKHA8P1O95397 391 aa12.39□□□□□ -0.43
CASP3-201ENST00000308394 FMNL1O95466 1100 aaPredicted RBP12.39□□□□□ -0.43
CASP3-201ENST00000308394 KIF5BP33176 963 aa12.39□□□□□ -0.43
CASP3-201ENST00000308394 AKAP17AQ02040 695 aaKnown RBP12.39□□□□□ -0.43
CASP3-201ENST00000308394 FAM83AQ86UY5 434 aa12.39□□□□□ -0.43
CASP3-201ENST00000308394 CLEC10AQ8IUN9 316 aa12.39□□□□□ -0.43
CASP3-201ENST00000308394 GJB4Q9NTQ9 266 aa12.39□□□□□ -0.43
CASP3-201ENST00000308394 GEMIN8Q9NWZ8 242 aaKnown RBP12.39□□□□□ -0.43
CASP3-201ENST00000308394 CLIP2Q9UDT6 1046 aa12.39□□□□□ -0.43
CASP3-201ENST00000308394 UBE2Q2LH0YL09 131 aa12.38□□□□□ -0.43
CASP3-201ENST00000308394 GDF11O95390 407 aa12.38□□□□□ -0.43
CASP3-201ENST00000308394 TOP1P11387 765 aaKnown RBP12.38□□□□□ -0.43
CASP3-201ENST00000308394 C9orf131Q5VYM1 1079 aa12.38□□□□□ -0.43
CASP3-201ENST00000308394 TATDN1Q6P1N9 297 aa12.38□□□□□ -0.43
CASP3-201ENST00000308394 EP400NLQ6ZTU2 488 aa12.38□□□□□ -0.43
CASP3-201ENST00000308394 DDNO94850 711 aaPredicted RBP12.38□□□□□ -0.43
CASP3-201ENST00000308394 TTLL1O95922 423 aa12.38□□□□□ -0.43
CASP3-201ENST00000308394 RASA3Q14644 834 aa12.38□□□□□ -0.43
CASP3-201ENST00000308394 MIGA2Q7L4E1 593 aa12.38□□□□□ -0.43
CASP3-201ENST00000308394 CDAN1Q8IWY9 1227 aa12.38□□□□□ -0.43
CASP3-201ENST00000308394 TSPAN18Q96SJ8 248 aa12.38□□□□□ -0.43
CASP3-201ENST00000308394 GPRC5DQ9NZD1 345 aa12.38□□□□□ -0.43
CASP3-201ENST00000308394 HERC5Q9UII4 1024 aaKnown RBP12.38□□□□□ -0.43
CASP3-201ENST00000308394 HACL1Q9UJ83 578 aa12.38□□□□□ -0.43
CASP3-201ENST00000308394 PLIN4Q96Q06 1357 aa12.38□□□□□ -0.43
CASP3-201ENST00000308394 ASTN2O75129 1339 aaPredicted RBP12.37□□□□□ -0.43
CASP3-201ENST00000308394 GUCY1A2P33402 732 aa12.37□□□□□ -0.43
CASP3-201ENST00000308394 TNFAIP1Q13829 316 aa12.37□□□□□ -0.43
CASP3-201ENST00000308394 TRIM29Q14134 588 aa12.37□□□□□ -0.43
CASP3-201ENST00000308394 ABCB5Q2M3G0 1257 aa12.37□□□□□ -0.43
CASP3-201ENST00000308394 SHROOM1Q2M3G4 852 aaPredicted RBP12.37□□□□□ -0.43
CASP3-201ENST00000308394 FAM173BQ6P4H8 233 aa12.37□□□□□ -0.43
CASP3-201ENST00000308394 TMTC3Q6ZXV5 915 aa12.37□□□□□ -0.43
CASP3-201ENST00000308394 METTL16Q86W50 562 aaKnown RBP12.37□□□□□ -0.43
CASP3-201ENST00000308394 LRRC47Q8N1G4 583 aaKnown RBP12.37□□□□□ -0.43
CASP3-201ENST00000308394 FBXO18Q8NFZ0 1043 aa12.37□□□□□ -0.43
CASP3-201ENST00000308394 WASF1Q92558 559 aa12.37□□□□□ -0.43
CASP3-201ENST00000308394 STK36Q9NRP7 1315 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms