RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 NAP1L4Q99733 375 aaKnown RBP16.36■□□□□ 0.21
SCN3B-201ENST00000299333 YY1AP1Q9H869 796 aa16.36■□□□□ 0.21
SCN3B-201ENST00000299333 DYTNA2CJ06 578 aa16.35■□□□□ 0.21
SCN3B-201ENST00000299333 GUCY2DQ02846 1103 aa16.35■□□□□ 0.21
SCN3B-201ENST00000299333 ANKLE2Q86XL3 938 aa16.35■□□□□ 0.21
SCN3B-201ENST00000299333 FBXO41Q8TF61 875 aa16.35■□□□□ 0.21
SCN3B-201ENST00000299333 HAUS1Q96CS2 278 aa16.35■□□□□ 0.21
SCN3B-201ENST00000299333 SERTAD1Q9UHV2 236 aa16.35■□□□□ 0.21
SCN3B-201ENST00000299333 ASXL1Q8IXJ9 1541 aa16.35■□□□□ 0.21
SCN3B-201ENST00000299333 THOC2Q8NI27 1593 aaKnown RBP16.35■□□□□ 0.21
SCN3B-201ENST00000299333 NR1I2O75469 434 aa16.35■□□□□ 0.21
SCN3B-201ENST00000299333 MBD4O95243 580 aa16.35■□□□□ 0.21
SCN3B-201ENST00000299333 PHBP35232 272 aa16.35■□□□□ 0.21
SCN3B-201ENST00000299333 PCYT1AP49585 367 aa16.35■□□□□ 0.21
SCN3B-201ENST00000299333 NLRP7Q8WX94 980 aa16.35■□□□□ 0.21
SCN3B-201ENST00000299333 LSM14BQ9BX40 385 aaKnown RBP16.35■□□□□ 0.21
SCN3B-201ENST00000299333 VAMP4O75379 141 aa16.35■□□□□ 0.21
SCN3B-201ENST00000299333 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.35■□□□□ 0.21
SCN3B-201ENST00000299333 FAM133BQ5BKY9 247 aaKnown RBP16.35■□□□□ 0.21
SCN3B-201ENST00000299333 MAEAQ7L5Y9 396 aa16.35■□□□□ 0.21
SCN3B-201ENST00000299333 RABGGTAQ92696 567 aa16.35■□□□□ 0.21
SCN3B-201ENST00000299333 INTS9Q9NV88 658 aaKnown RBP16.35■□□□□ 0.21
SCN3B-201ENST00000299333 BCRP11274 1271 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 SMTNP53814 917 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 SLC39A6Q13433 755 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 RCN2Q14257 317 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 BRD1O95696 1058 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 GABPAQ06546 454 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 PHKBQ93100 1093 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 PPP1R13BQ96KQ4 1090 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 TTLL3Q9Y4R7 772 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 KCNJ18B7U540 433 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 TRPA1O75762 1119 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 ARHGAP4P98171 946 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 KCNJ12Q14500 433 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 RSAD2Q8WXG1 361 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 ANLNQ9NQW6 1124 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 HAUS3Q68CZ6 603 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 NBPF5PQ86XG9 351 aaPredicted RBP16.34■□□□□ 0.21
SCN3B-201ENST00000299333 NUDCD3Q8IVD9 361 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 RIC8AQ9NPQ8 531 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 KIAA1468Q9P260 1216 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 KRT3P12035 628 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 APBA1Q02410 837 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 KRT24Q2M2I5 525 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 GAS2L3Q86XJ1 694 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 SNX29Q8TEQ0 813 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 TSC22D3Q99576 134 aa16.34■□□□□ 0.21
SCN3B-201ENST00000299333 SART1O43290 800 aaKnown RBP16.33■□□□□ 0.21
SCN3B-201ENST00000299333 SLC8A3P57103 927 aa16.33■□□□□ 0.21
SCN3B-201ENST00000299333 KRT40Q6A162 431 aa16.33■□□□□ 0.21
SCN3B-201ENST00000299333 JADE1Q6IE81 842 aa16.33■□□□□ 0.21
SCN3B-201ENST00000299333 TMEM87BQ96K49 555 aa16.33■□□□□ 0.21
SCN3B-201ENST00000299333 MSH6P52701 1360 aa16.33■□□□□ 0.21
SCN3B-201ENST00000299333 ZFXP17010 805 aaPredicted RBP16.33■□□□□ 0.2
SCN3B-201ENST00000299333 HAUS8Q9BT25 410 aa16.33■□□□□ 0.2
SCN3B-201ENST00000299333 MYL10Q9BUA6 226 aa16.33■□□□□ 0.2
SCN3B-201ENST00000299333 ZMYND10O75800 440 aa16.33■□□□□ 0.2
SCN3B-201ENST00000299333 IL1RL1Q01638 556 aa16.33■□□□□ 0.2
SCN3B-201ENST00000299333 FAM227BQ96M60 508 aa16.33■□□□□ 0.2
SCN3B-201ENST00000299333 SCINQ9Y6U3 715 aa16.33■□□□□ 0.2
SCN3B-201ENST00000299333 NUP160Q12769 1436 aa16.33■□□□□ 0.2
SCN3B-201ENST00000299333 TCP1P17987 556 aaKnown RBP16.33■□□□□ 0.2
SCN3B-201ENST00000299333 GUCY2CP25092 1073 aa16.33■□□□□ 0.2
SCN3B-201ENST00000299333 PDCD2Q16342 344 aaPredicted RBP16.33■□□□□ 0.2
SCN3B-201ENST00000299333 SDCCAG3Q96C92 435 aa16.33■□□□□ 0.2
SCN3B-201ENST00000299333 KLHL29Q96CT2 875 aa16.33■□□□□ 0.2
SCN3B-201ENST00000299333 GPCPD1Q9NPB8 672 aa16.33■□□□□ 0.2
SCN3B-201ENST00000299333 ANKFY1Q9P2R3 1169 aa16.33■□□□□ 0.2
SCN3B-201ENST00000299333 LRWD1Q9UFC0 647 aa16.33■□□□□ 0.2
SCN3B-201ENST00000299333 ANGEL1Q9UNK9 670 aaKnown RBP16.33■□□□□ 0.2
SCN3B-201ENST00000299333 PHF8Q9UPP1 1060 aa16.33■□□□□ 0.2
SCN3B-201ENST00000299333 ATP8B1O43520 1251 aa16.32■□□□□ 0.2
SCN3B-201ENST00000299333 EXOC3O60645 756 aa16.32■□□□□ 0.2
SCN3B-201ENST00000299333 NCAPH2Q6IBW4 605 aa16.32■□□□□ 0.2
SCN3B-201ENST00000299333 UIMC1Q96RL1 719 aa16.32■□□□□ 0.2
SCN3B-201ENST00000299333 KCNJ14Q9UNX9 436 aa16.32■□□□□ 0.2
SCN3B-201ENST00000299333 BIVM-ERCC5R4GMW8 1640 aa16.32■□□□□ 0.2
SCN3B-201ENST00000299333 FOXO3O43524 673 aa16.32■□□□□ 0.2
SCN3B-201ENST00000299333 LINS1Q8NG48 757 aa16.32■□□□□ 0.2
SCN3B-201ENST00000299333 LRGUKQ96M69 825 aa16.32■□□□□ 0.2
SCN3B-201ENST00000299333 EVI5O60447 810 aa16.32■□□□□ 0.2
SCN3B-201ENST00000299333 HNRNPH2P55795 449 aaKnown RBP16.32■□□□□ 0.2
SCN3B-201ENST00000299333 GPT2Q8TD30 523 aa16.32■□□□□ 0.2
SCN3B-201ENST00000299333 ZBTB7BO15156 539 aaPredicted RBP16.32■□□□□ 0.2
SCN3B-201ENST00000299333 MRPL12P52815 198 aaKnown RBP16.32■□□□□ 0.2
SCN3B-201ENST00000299333 TAF12Q16514 161 aa16.32■□□□□ 0.2
SCN3B-201ENST00000299333 MCTP2Q6DN12 878 aa16.32■□□□□ 0.2
SCN3B-201ENST00000299333 NRBP1Q9UHY1 535 aa16.32■□□□□ 0.2
SCN3B-201ENST00000299333 PFKFB1P16118 471 aa16.32■□□□□ 0.2
SCN3B-201ENST00000299333 ADCY1Q08828 1119 aa16.32■□□□□ 0.2
SCN3B-201ENST00000299333 MMEL1Q495T6 779 aa16.32■□□□□ 0.2
SCN3B-201ENST00000299333 GJC2Q5T442 439 aaPredicted RBP16.32■□□□□ 0.2
SCN3B-201ENST00000299333 IWS1Q96ST2 819 aa16.32■□□□□ 0.2
SCN3B-201ENST00000299333 HAUS4Q9H6D7 363 aa16.32■□□□□ 0.2
SCN3B-201ENST00000299333 GCNT3O95395 438 aa16.31■□□□□ 0.2
SCN3B-201ENST00000299333 ICE2Q659A1 982 aa16.31■□□□□ 0.2
SCN3B-201ENST00000299333 GRK7Q8WTQ7 553 aa16.31■□□□□ 0.2
SCN3B-201ENST00000299333 PARD3Q8TEW0 1356 aa16.31■□□□□ 0.2
SCN3B-201ENST00000299333 ESRRGP62508 458 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms