RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 HERC5Q9UII4 1024 aaKnown RBP11.39□□□□□ -0.59
CNOT9-202ENST00000295701 ZMYND8Q9ULU4 1186 aaPredicted RBP11.39□□□□□ -0.59
CNOT9-202ENST00000295701 NDUFB9Q9Y6M9 179 aa11.39□□□□□ -0.59
CNOT9-202ENST00000295701 FLT1P17948 1338 aa11.38□□□□□ -0.59
CNOT9-202ENST00000295701 SURF6O75683 361 aaKnown RBP11.38□□□□□ -0.59
CNOT9-202ENST00000295701 HMGCRP04035 888 aa11.38□□□□□ -0.59
CNOT9-202ENST00000295701 HOXA7P31268 230 aaPredicted RBP11.38□□□□□ -0.59
CNOT9-202ENST00000295701 HERVK_113P62684 666 aa11.38□□□□□ -0.59
CNOT9-202ENST00000295701 IRX3P78415 501 aaPredicted RBP11.38□□□□□ -0.59
CNOT9-202ENST00000295701 ATP8B2P98198 1209 aa11.38□□□□□ -0.59
CNOT9-202ENST00000295701 PABPC4Q13310 644 aaKnown RBP eCLIP11.38□□□□□ -0.59
CNOT9-202ENST00000295701 OS9Q13438 667 aaPredicted RBP11.38□□□□□ -0.59
CNOT9-202ENST00000295701 C7orf61Q8IZ16 206 aa11.38□□□□□ -0.59
CNOT9-202ENST00000295701 ZFRQ96KR1 1074 aaKnown RBP11.38□□□□□ -0.59
CNOT9-202ENST00000295701 NOL10Q9BSC4 688 aaKnown RBP11.38□□□□□ -0.59
CNOT9-202ENST00000295701 TBC1D2Q9BYX2 928 aa11.38□□□□□ -0.59
CNOT9-202ENST00000295701 HMX1Q9NP08 348 aaPredicted RBP11.38□□□□□ -0.59
CNOT9-202ENST00000295701 GPR108Q9NPR9 543 aa11.38□□□□□ -0.59
CNOT9-202ENST00000295701 MORF4L1Q9UBU8 362 aa11.38□□□□□ -0.59
CNOT9-202ENST00000295701 MAST2Q6P0Q8 1798 aa11.38□□□□□ -0.59
CNOT9-202ENST00000295701 DNAH12Q6ZR08 3092 aa11.38□□□□□ -0.59
CNOT9-202ENST00000295701 RPTORQ8N122 1335 aa11.37□□□□□ -0.59
CNOT9-202ENST00000295701 USP17L10C9JJH3 530 aa11.37□□□□□ -0.59
CNOT9-202ENST00000295701 BAG3O95817 575 aa11.37□□□□□ -0.59
CNOT9-202ENST00000295701 ASNSP08243 561 aa11.37□□□□□ -0.59
CNOT9-202ENST00000295701 SYN1P17600 705 aa11.37□□□□□ -0.59
CNOT9-202ENST00000295701 CCL14Q16627 93 aa11.37□□□□□ -0.59
CNOT9-202ENST00000295701 CCDC158Q5M9N0 1113 aa11.37□□□□□ -0.59
CNOT9-202ENST00000295701 METTL16Q86W50 562 aaKnown RBP11.37□□□□□ -0.59
CNOT9-202ENST00000295701 FOXP4Q8IVH2 680 aaPredicted RBP11.37□□□□□ -0.59
CNOT9-202ENST00000295701 CRACR2BQ8N4Y2 399 aaPredicted RBP11.37□□□□□ -0.59
CNOT9-202ENST00000295701 MIGA1Q8NAN2 632 aa11.37□□□□□ -0.59
CNOT9-202ENST00000295701 SSH3Q8TE77 659 aa11.37□□□□□ -0.59
CNOT9-202ENST00000295701 PORCNQ9H237 461 aa11.37□□□□□ -0.59
CNOT9-202ENST00000295701 DHX36Q9H2U1 1008 aaKnown RBP11.37□□□□□ -0.59
CNOT9-202ENST00000295701 TMOD4Q9NZQ9 345 aa11.37□□□□□ -0.59
CNOT9-202ENST00000295701 DBNLQ9UJU6 430 aaKnown RBP11.37□□□□□ -0.59
CNOT9-202ENST00000295701 ZBTB21Q9ULJ3 1066 aa11.37□□□□□ -0.59
CNOT9-202ENST00000295701 CCER2I3L3R5 266 aa11.36□□□□□ -0.59
CNOT9-202ENST00000295701 RLBP1P12271 317 aa11.36□□□□□ -0.59
CNOT9-202ENST00000295701 CYP7A1P22680 504 aa11.36□□□□□ -0.59
CNOT9-202ENST00000295701 ZYXQ15942 572 aaKnown RBP11.36□□□□□ -0.59
CNOT9-202ENST00000295701 ZKSCAN2Q63HK3 967 aa11.36□□□□□ -0.59
CNOT9-202ENST00000295701 PACS2Q86VP3 889 aa11.36□□□□□ -0.59
CNOT9-202ENST00000295701 GPRC5AQ8NFJ5 357 aa11.36□□□□□ -0.59
CNOT9-202ENST00000295701 EAF2Q96CJ1 260 aaPredicted RBP11.36□□□□□ -0.59
CNOT9-202ENST00000295701 GDF15Q99988 308 aa11.36□□□□□ -0.59
CNOT9-202ENST00000295701 PAGR1Q9BTK6 254 aa11.36□□□□□ -0.59
CNOT9-202ENST00000295701 ANTXR1Q9H6X2 564 aa11.36□□□□□ -0.59
CNOT9-202ENST00000295701 OGDHLQ9ULD0 1010 aa11.36□□□□□ -0.59
CNOT9-202ENST00000295701 C19orf81C9J6K1 198 aa11.35□□□□□ -0.59
CNOT9-202ENST00000295701 GH2P01242 217 aa11.35□□□□□ -0.59
CNOT9-202ENST00000295701 CCND3P30281 292 aaPredicted RBP11.35□□□□□ -0.59
CNOT9-202ENST00000295701 ERVK-9P63128 1117 aa11.35□□□□□ -0.59
CNOT9-202ENST00000295701 ERVK-24P63145 666 aa11.35□□□□□ -0.59
CNOT9-202ENST00000295701 CACNB2Q08289 660 aaPredicted RBP11.35□□□□□ -0.59
CNOT9-202ENST00000295701 MAP3K21Q5TCX8 1036 aa11.35□□□□□ -0.59
CNOT9-202ENST00000295701 ANKLE1Q8NAG6 615 aa11.35□□□□□ -0.59
CNOT9-202ENST00000295701 USP6NLQ92738 828 aa11.35□□□□□ -0.59
CNOT9-202ENST00000295701 NUDT12Q9BQG2 462 aa11.35□□□□□ -0.59
CNOT9-202ENST00000295701 TRIM34Q9BYJ4 488 aa11.35□□□□□ -0.59
CNOT9-202ENST00000295701 C11orf49Q9H6J7 331 aa11.35□□□□□ -0.59
CNOT9-202ENST00000295701 NOP58Q9Y2X3 529 aaKnown RBP11.35□□□□□ -0.59
CNOT9-202ENST00000295701 PFASO15067 1338 aa11.35□□□□□ -0.59
CNOT9-202ENST00000295701 A0A0C4DFX4 3053 aa11.34□□□□□ -0.59
CNOT9-202ENST00000295701 SOWAHBA6NEL2 793 aa11.34□□□□□ -0.59
CNOT9-202ENST00000295701 CNMDO75829 334 aa11.34□□□□□ -0.59
CNOT9-202ENST00000295701 IDH1O75874 414 aaKnown RBP11.34□□□□□ -0.59
CNOT9-202ENST00000295701 MORN1Q5T089 497 aa11.34□□□□□ -0.59
CNOT9-202ENST00000295701 USP17L2Q6R6M4 530 aa11.34□□□□□ -0.59
CNOT9-202ENST00000295701 GPR142Q7Z601 462 aa11.34□□□□□ -0.59
CNOT9-202ENST00000295701 MAGEB6Q8N7X4 407 aa11.34□□□□□ -0.59
CNOT9-202ENST00000295701 ACER1Q8TDN7 264 aa11.34□□□□□ -0.59
CNOT9-202ENST00000295701 ZNF512BQ96KM6 892 aaPredicted RBP11.34□□□□□ -0.59
CNOT9-202ENST00000295701 FRMPD3Q5JV73 1810 aa11.33□□□□□ -0.6
CNOT9-202ENST00000295701 A0A1W2PPC1 479 aa11.33□□□□□ -0.6
CNOT9-202ENST00000295701 HLA-DOAP06340 250 aa11.33□□□□□ -0.6
CNOT9-202ENST00000295701 CAPN2P17655 700 aa11.33□□□□□ -0.6
CNOT9-202ENST00000295701 MAGEA10P43363 369 aaPredicted RBP11.33□□□□□ -0.6
CNOT9-202ENST00000295701 USP5P45974 858 aa11.33□□□□□ -0.6
CNOT9-202ENST00000295701 PLCD1P51178 756 aa11.33□□□□□ -0.6
CNOT9-202ENST00000295701 ITPRIPQ8IWB1 547 aa11.33□□□□□ -0.6
CNOT9-202ENST00000295701 FLRT1Q9NZU1 646 aa11.33□□□□□ -0.6
CNOT9-202ENST00000295701 XRCC5P13010 732 aaKnown RBP11.32□□□□□ -0.6
CNOT9-202ENST00000295701 ZKSCAN1P17029 563 aaPredicted RBP11.32□□□□□ -0.6
CNOT9-202ENST00000295701 MAPK4P31152 587 aa11.32□□□□□ -0.6
CNOT9-202ENST00000295701 GUCY1A2P33402 732 aa11.32□□□□□ -0.6
CNOT9-202ENST00000295701 BMP8BP34820 402 aa11.32□□□□□ -0.6
CNOT9-202ENST00000295701 PRSS12P56730 875 aa11.32□□□□□ -0.6
CNOT9-202ENST00000295701 RAB3GAP1Q15042 981 aa11.32□□□□□ -0.6
CNOT9-202ENST00000295701 LRRC26Q2I0M4 334 aa11.32□□□□□ -0.6
CNOT9-202ENST00000295701 TATDN1Q6P1N9 297 aa11.32□□□□□ -0.6
CNOT9-202ENST00000295701 Q7L0L9 218 aa11.32□□□□□ -0.6
CNOT9-202ENST00000295701 PLEKHH3Q7Z736 793 aa11.32□□□□□ -0.6
CNOT9-202ENST00000295701 SLC17A8Q8NDX2 589 aa11.32□□□□□ -0.6
CNOT9-202ENST00000295701 SOCS4Q8WXH5 440 aa11.32□□□□□ -0.6
CNOT9-202ENST00000295701 GINM1Q9NU53 330 aa11.32□□□□□ -0.6
CNOT9-202ENST00000295701 BTBD7Q9P203 1132 aa11.32□□□□□ -0.6
CNOT9-202ENST00000295701 EXOC6BQ9Y2D4 811 aa11.32□□□□□ -0.6
CNOT9-202ENST00000295701 ZNFX1Q9P2E3 1918 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms