RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 IFIT1BQ5T764 474 aaKnown RBP16.79■□□□□ 0.28
CCT3-201ENST00000295688 IQCA1Q86XH1 822 aa16.79■□□□□ 0.28
CCT3-201ENST00000295688 MSANTD4Q8NCY6 345 aa16.79■□□□□ 0.28
CCT3-201ENST00000295688 CPLX3Q8WVH0 158 aa16.79■□□□□ 0.28
CCT3-201ENST00000295688 GBP3Q9H0R5 595 aa16.79■□□□□ 0.28
CCT3-201ENST00000295688 EPC1Q9H2F5 836 aa16.79■□□□□ 0.28
CCT3-201ENST00000295688 MYH2Q9UKX2 1941 aa16.79■□□□□ 0.28
CCT3-201ENST00000295688 A0A087X0B3 334 aa16.78■□□□□ 0.28
CCT3-201ENST00000295688 DDAH1O94760 285 aa16.78■□□□□ 0.28
CCT3-201ENST00000295688 USP5P45974 858 aa16.78■□□□□ 0.28
CCT3-201ENST00000295688 BCAMP50895 628 aa16.78■□□□□ 0.28
CCT3-201ENST00000295688 PIP4K2BP78356 416 aa16.78■□□□□ 0.28
CCT3-201ENST00000295688 PARP10Q53GL7 1025 aa16.78■□□□□ 0.28
CCT3-201ENST00000295688 ZNF569Q5MCW4 686 aa16.78■□□□□ 0.28
CCT3-201ENST00000295688 MIGA1Q8NAN2 632 aa16.78■□□□□ 0.28
CCT3-201ENST00000295688 GNL3LQ9NVN8 582 aaKnown RBP16.78■□□□□ 0.28
CCT3-201ENST00000295688 RMND1Q9NWS8 449 aa16.78■□□□□ 0.28
CCT3-201ENST00000295688 RWDD2AQ9UIY3 292 aa16.78■□□□□ 0.28
CCT3-201ENST00000295688 RAB21Q9UL25 225 aa16.78■□□□□ 0.28
CCT3-201ENST00000295688 COL22A1Q8NFW1 1626 aaPredicted RBP16.78■□□□□ 0.28
CCT3-201ENST00000295688 MAP2K7O14733 419 aa16.78■□□□□ 0.28
CCT3-201ENST00000295688 CAPN2P17655 700 aa16.78■□□□□ 0.28
CCT3-201ENST00000295688 CASP14P31944 242 aa16.78■□□□□ 0.28
CCT3-201ENST00000295688 ATP2C1P98194 919 aaPredicted RBP16.78■□□□□ 0.28
CCT3-201ENST00000295688 FUT2Q10981 343 aa16.78■□□□□ 0.28
CCT3-201ENST00000295688 WHAMMP3Q1A5X7 153 aa16.78■□□□□ 0.28
CCT3-201ENST00000295688 CYP26C1Q6V0L0 522 aa16.78■□□□□ 0.28
CCT3-201ENST00000295688 HDXQ7Z353 690 aa16.78■□□□□ 0.28
CCT3-201ENST00000295688 SLC4A9Q96Q91 983 aa16.78■□□□□ 0.28
CCT3-201ENST00000295688 V9GY48 417 aaPredicted RBP16.78■□□□□ 0.28
CCT3-201ENST00000295688 N4BP3O15049 544 aa16.77■□□□□ 0.28
CCT3-201ENST00000295688 GTPBP6O43824 516 aaPredicted RBP16.77■□□□□ 0.28
CCT3-201ENST00000295688 EIF3JO75822 258 aaKnown RBP16.77■□□□□ 0.28
CCT3-201ENST00000295688 TMED8Q6PL24 325 aaPredicted RBP16.77■□□□□ 0.28
CCT3-201ENST00000295688 ENAHQ8N8S7 591 aaPredicted RBP16.77■□□□□ 0.28
CCT3-201ENST00000295688 EXOC4Q96A65 974 aa16.77■□□□□ 0.28
CCT3-201ENST00000295688 CDC5LQ99459 802 aaKnown RBP16.77■□□□□ 0.28
CCT3-201ENST00000295688 BRIP1Q9BX63 1249 aa16.77■□□□□ 0.28
CCT3-201ENST00000295688 XIRP1Q702N8 1843 aaKnown RBP16.77■□□□□ 0.27
CCT3-201ENST00000295688 GYPCP04921 128 aa16.77■□□□□ 0.27
CCT3-201ENST00000295688 SUSD4Q5VX71 490 aa16.77■□□□□ 0.27
CCT3-201ENST00000295688 BBXQ8WY36 941 aaPredicted RBP16.77■□□□□ 0.27
CCT3-201ENST00000295688 NAPGQ99747 312 aaPredicted RBP16.77■□□□□ 0.27
CCT3-201ENST00000295688 IRX2Q9BZI1 471 aaPredicted RBP16.77■□□□□ 0.27
CCT3-201ENST00000295688 CTNND2Q9UQB3 1225 aa16.77■□□□□ 0.27
CCT3-201ENST00000295688 BCL9LQ86UU0 1499 aa16.76■□□□□ 0.27
CCT3-201ENST00000295688 ZNF174Q15697 407 aa16.76■□□□□ 0.27
CCT3-201ENST00000295688 RRAGBQ5VZM2 374 aa16.76■□□□□ 0.27
CCT3-201ENST00000295688 TNFRSF25Q93038 417 aa16.76■□□□□ 0.27
CCT3-201ENST00000295688 DLEC1Q9Y238 1755 aa16.76■□□□□ 0.27
CCT3-201ENST00000295688 FAM205CA6NFA0 338 aa16.75■□□□□ 0.27
CCT3-201ENST00000295688 FGRP09769 529 aa16.75■□□□□ 0.27
CCT3-201ENST00000295688 COPB1P53618 953 aaKnown RBP16.75■□□□□ 0.27
CCT3-201ENST00000295688 PAK1Q13153 545 aa16.75■□□□□ 0.27
CCT3-201ENST00000295688 PTGDRQ13258 359 aa16.75■□□□□ 0.27
CCT3-201ENST00000295688 KRT31Q15323 416 aa16.75■□□□□ 0.27
CCT3-201ENST00000295688 TMTC3Q6ZXV5 915 aa16.75■□□□□ 0.27
CCT3-201ENST00000295688 CTAGE15A4D2H0 777 aa16.75■□□□□ 0.27
CCT3-201ENST00000295688 SNAP23O00161 211 aa16.75■□□□□ 0.27
CCT3-201ENST00000295688 CTAGE8P0CG41 777 aa16.75■□□□□ 0.27
CCT3-201ENST00000295688 FXR1P51114 621 aaKnown RBP eCLIP16.75■□□□□ 0.27
CCT3-201ENST00000295688 E2F4Q16254 413 aa16.75■□□□□ 0.27
CCT3-201ENST00000295688 EARS2Q5JPH6 523 aaKnown RBP16.75■□□□□ 0.27
CCT3-201ENST00000295688 ZNF658Q5TYW1 1059 aaPredicted RBP16.75■□□□□ 0.27
CCT3-201ENST00000295688 CTAGE6Q86UF2 777 aa16.75■□□□□ 0.27
CCT3-201ENST00000295688 CTAGE4Q8IX94 777 aa16.75■□□□□ 0.27
CCT3-201ENST00000295688 CTCFLQ8NI51 663 aaPredicted RBP16.75■□□□□ 0.27
CCT3-201ENST00000295688 SDR42E1Q8WUS8 393 aa16.75■□□□□ 0.27
CCT3-201ENST00000295688 SHISA4Q96DD7 197 aa16.75■□□□□ 0.27
CCT3-201ENST00000295688 ANKZF1Q9H8Y5 726 aa16.75■□□□□ 0.27
CCT3-201ENST00000295688 ABHD10Q9NUJ1 306 aa16.75■□□□□ 0.27
CCT3-201ENST00000295688 PUF60Q9UHX1 559 aaKnown RBP16.75■□□□□ 0.27
CCT3-201ENST00000295688 DUOX1Q9NRD9 1551 aa16.75■□□□□ 0.27
CCT3-201ENST00000295688 NHSL1Q5SYE7 1610 aa16.75■□□□□ 0.27
CCT3-201ENST00000295688 DISP2A7MBM2 1401 aa16.74■□□□□ 0.27
CCT3-201ENST00000295688 MYH8P13535 1937 aa16.74■□□□□ 0.27
CCT3-201ENST00000295688 EIF5P55010 431 aaKnown RBP16.74■□□□□ 0.27
CCT3-201ENST00000295688 TROAPQ12815 778 aa16.74■□□□□ 0.27
CCT3-201ENST00000295688 SEMA3FQ13275 785 aa16.74■□□□□ 0.27
CCT3-201ENST00000295688 BEND6Q5SZJ8 279 aaPredicted RBP16.74■□□□□ 0.27
CCT3-201ENST00000295688 ARL6IP4Q66PJ3 421 aaKnown RBP16.74■□□□□ 0.27
CCT3-201ENST00000295688 SLC35F6Q8N357 371 aa16.74■□□□□ 0.27
CCT3-201ENST00000295688 NUP88Q99567 741 aaPredicted RBP16.74■□□□□ 0.27
CCT3-201ENST00000295688 CWC15Q9P013 229 aaKnown RBP16.74■□□□□ 0.27
CCT3-201ENST00000295688 SLAIN2Q9P270 581 aa16.74■□□□□ 0.27
CCT3-201ENST00000295688 ZBTB22O15209 634 aa16.74■□□□□ 0.27
CCT3-201ENST00000295688 PRDM1O75626 825 aa16.74■□□□□ 0.27
CCT3-201ENST00000295688 CHRNDQ07001 517 aa16.74■□□□□ 0.27
CCT3-201ENST00000295688 RIOK1Q9BRS2 568 aaKnown RBP16.74■□□□□ 0.27
CCT3-201ENST00000295688 ACBD3Q9H3P7 528 aa16.74■□□□□ 0.27
CCT3-201ENST00000295688 ABCF2Q9UG63 623 aa16.74■□□□□ 0.27
CCT3-201ENST00000295688 ZNF804BA4D1E1 1349 aa16.73■□□□□ 0.27
CCT3-201ENST00000295688 XDHP47989 1333 aa16.73■□□□□ 0.27
CCT3-201ENST00000295688 H7C1D1 291 aa16.73■□□□□ 0.27
CCT3-201ENST00000295688 PLEKHA8P1O95397 391 aa16.73■□□□□ 0.27
CCT3-201ENST00000295688 LONP1P36776 959 aaKnown RBP16.73■□□□□ 0.27
CCT3-201ENST00000295688 TCP11X2Q5H9J9 407 aa16.73■□□□□ 0.27
CCT3-201ENST00000295688 PDXDC2PQ6P474 469 aa16.73■□□□□ 0.27
CCT3-201ENST00000295688 SMYD4Q8IYR2 804 aaPredicted RBP16.73■□□□□ 0.27
CCT3-201ENST00000295688 ZSWIM4Q9H7M6 989 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms