RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 FZD9O00144 591 aa13.35□□□□□ -0.27
SYNGAP1-201ENST00000293748 ZFYP08048 801 aaPredicted RBP13.35□□□□□ -0.27
SYNGAP1-201ENST00000293748 CCDC121Q6ZUS5 278 aa13.35□□□□□ -0.27
SYNGAP1-201ENST00000293748 SPATA24Q86W54 205 aa13.35□□□□□ -0.27
SYNGAP1-201ENST00000293748 ZSCAN29Q8IWY8 852 aaPredicted RBP13.35□□□□□ -0.27
SYNGAP1-201ENST00000293748 SELENOOQ9BVL4 669 aa13.35□□□□□ -0.27
SYNGAP1-201ENST00000293748 SLC26A6Q9BXS9 759 aa13.35□□□□□ -0.27
SYNGAP1-201ENST00000293748 STMN4Q9H169 189 aaPredicted RBP13.35□□□□□ -0.27
SYNGAP1-201ENST00000293748 JAG2Q9Y219 1238 aa13.35□□□□□ -0.27
SYNGAP1-201ENST00000293748 TCERG1LQ5VWI1 586 aa13.35□□□□□ -0.27
SYNGAP1-201ENST00000293748 ZNF444Q8N0Y2 327 aaPredicted RBP13.35□□□□□ -0.27
SYNGAP1-201ENST00000293748 ANKS4BQ8N8V4 417 aa13.35□□□□□ -0.27
SYNGAP1-201ENST00000293748 FAM84BQ96KN1 310 aaPredicted RBP13.35□□□□□ -0.27
SYNGAP1-201ENST00000293748 RRAGBQ5VZM2 374 aa13.35□□□□□ -0.27
SYNGAP1-201ENST00000293748 CEP63Q96MT8 703 aa13.35□□□□□ -0.27
SYNGAP1-201ENST00000293748 VPS18Q9P253 973 aa13.35□□□□□ -0.27
SYNGAP1-201ENST00000293748 NEBLO76041 1014 aa13.35□□□□□ -0.27
SYNGAP1-201ENST00000293748 KIF5AQ12840 1032 aa13.35□□□□□ -0.27
SYNGAP1-201ENST00000293748 NAA16Q6N069 864 aaPredicted RBP13.35□□□□□ -0.27
SYNGAP1-201ENST00000293748 SYT10Q6XYQ8 523 aa13.35□□□□□ -0.27
SYNGAP1-201ENST00000293748 STXBP4Q6ZWJ1 553 aa13.35□□□□□ -0.27
SYNGAP1-201ENST00000293748 SPATA5Q8NB90 893 aa13.35□□□□□ -0.27
SYNGAP1-201ENST00000293748 PSMA7O14818 248 aa13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 SPTLC2O15270 562 aa13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 ZNF445P59923 1031 aa13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 FKBP1AP62942 108 aaKnown RBP13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 ATG9AQ7Z3C6 839 aa13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 MYRIPQ8NFW9 859 aa13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 ALG1Q9BT22 464 aa13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 ATL3Q6DD88 541 aa13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 TMED8Q6PL24 325 aaPredicted RBP13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 HDXQ7Z353 690 aa13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 LDHDQ86WU2 507 aa13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 APOBEC3FQ8IUX4 373 aaKnown RBP13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 SPAG5Q96R06 1193 aa13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 DBNDD2Q9BQY9 259 aa13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 ATP2C2O75185 946 aa13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 CCDC6Q16204 474 aa13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 TMTC2Q8N394 836 aa13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 TDRD7Q8NHU6 1098 aaKnown RBP13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 DNAI2Q9GZS0 605 aa13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 EXOC1Q9NV70 894 aa13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 ZBTB43O43298 467 aa13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 CTNNA2P26232 953 aa13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 TBC1D10BQ4KMP7 808 aaPredicted RBP13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 MFSD6Q6ZSS7 791 aa13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 FBXO33Q7Z6M2 555 aa13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 PPM1EQ8WY54 764 aa13.34□□□□□ -0.27
SYNGAP1-201ENST00000293748 PRPHP41219 470 aa13.33□□□□□ -0.28
SYNGAP1-201ENST00000293748 TTC14Q96N46 770 aa13.33□□□□□ -0.28
SYNGAP1-201ENST00000293748 CCDC77Q9BR77 488 aa13.33□□□□□ -0.28
SYNGAP1-201ENST00000293748 RBSNQ9H1K0 784 aa13.33□□□□□ -0.28
SYNGAP1-201ENST00000293748 SNRKQ9NRH2 765 aa13.33□□□□□ -0.28
SYNGAP1-201ENST00000293748 NRXN2Q9P2S2 1712 aa13.33□□□□□ -0.28
SYNGAP1-201ENST00000293748 PHKA1P46020 1223 aa13.33□□□□□ -0.28
SYNGAP1-201ENST00000293748 VAV2P52735 878 aa13.33□□□□□ -0.28
SYNGAP1-201ENST00000293748 C10orf67Q8IYJ2 551 aa13.33□□□□□ -0.28
SYNGAP1-201ENST00000293748 ZNF408Q9H9D4 720 aa13.33□□□□□ -0.28
SYNGAP1-201ENST00000293748 GPRC5DQ9NZD1 345 aa13.33□□□□□ -0.28
SYNGAP1-201ENST00000293748 IL1R1P14778 569 aa13.33□□□□□ -0.28
SYNGAP1-201ENST00000293748 HAND2P61296 217 aa13.33□□□□□ -0.28
SYNGAP1-201ENST00000293748 WDHD1O75717 1129 aaPredicted RBP13.32□□□□□ -0.28
SYNGAP1-201ENST00000293748 TOMM70O94826 608 aa13.32□□□□□ -0.28
SYNGAP1-201ENST00000293748 VIL1P09327 827 aaKnown RBP13.32□□□□□ -0.28
SYNGAP1-201ENST00000293748 CHADLQ6NUI6 762 aa13.32□□□□□ -0.28
SYNGAP1-201ENST00000293748 CCDC129Q6ZRS4 1044 aa13.32□□□□□ -0.28
SYNGAP1-201ENST00000293748 ZNF541Q9H0D2 1346 aa13.32□□□□□ -0.28
SYNGAP1-201ENST00000293748 N4BP2Q86UW6 1770 aaPredicted RBP13.32□□□□□ -0.28
SYNGAP1-201ENST00000293748 IFNKQ9P0W0 207 aa13.32□□□□□ -0.28
SYNGAP1-201ENST00000293748 RASAL2Q9UJF2 1139 aa13.32□□□□□ -0.28
SYNGAP1-201ENST00000293748 TTC41PQ6P2S7 1318 aa13.32□□□□□ -0.28
SYNGAP1-201ENST00000293748 TUBB2AQ13885 445 aa13.32□□□□□ -0.28
SYNGAP1-201ENST00000293748 TUBB2BQ9BVA1 445 aa13.32□□□□□ -0.28
SYNGAP1-201ENST00000293748 HOMER2Q9NSB8 354 aa13.32□□□□□ -0.28
SYNGAP1-201ENST00000293748 KIF4AO95239 1232 aa13.32□□□□□ -0.28
SYNGAP1-201ENST00000293748 EVCP57679 992 aa13.32□□□□□ -0.28
SYNGAP1-201ENST00000293748 CDC37L1Q7L3B6 337 aa13.32□□□□□ -0.28
SYNGAP1-201ENST00000293748 ZNF784Q8NCA9 323 aaPredicted RBP13.32□□□□□ -0.28
SYNGAP1-201ENST00000293748 FAM76AQ8TAV0 307 aa13.32□□□□□ -0.28
SYNGAP1-201ENST00000293748 ZBTB12Q9Y330 459 aaPredicted RBP13.32□□□□□ -0.28
SYNGAP1-201ENST00000293748 AK2P54819 239 aa13.31□□□□□ -0.28
SYNGAP1-201ENST00000293748 SUPT20HL1Q3ZLR7 823 aa13.31□□□□□ -0.28
SYNGAP1-201ENST00000293748 CEP57Q86XR8 500 aa13.31□□□□□ -0.28
SYNGAP1-201ENST00000293748 TCEANC2Q96MN5 208 aa13.31□□□□□ -0.28
SYNGAP1-201ENST00000293748 SNAP23O00161 211 aa13.31□□□□□ -0.28
SYNGAP1-201ENST00000293748 MCMDC2Q4G0Z9 681 aa13.31□□□□□ -0.28
SYNGAP1-201ENST00000293748 ZC3H15Q8WU90 426 aaKnown RBP13.31□□□□□ -0.28
SYNGAP1-201ENST00000293748 NMRK2Q9NPI5 230 aa13.31□□□□□ -0.28
SYNGAP1-201ENST00000293748 A6NNZ2 444 aa13.31□□□□□ -0.28
SYNGAP1-201ENST00000293748 SEC24BO95487 1268 aa13.31□□□□□ -0.28
SYNGAP1-201ENST00000293748 HDLBPQ00341 1268 aaKnown RBP13.31□□□□□ -0.28
SYNGAP1-201ENST00000293748 TUBB8Q3ZCM7 444 aa13.31□□□□□ -0.28
SYNGAP1-201ENST00000293748 Q6ZUG5 572 aa13.31□□□□□ -0.28
SYNGAP1-201ENST00000293748 CCDC114Q96M63 670 aa13.31□□□□□ -0.28
SYNGAP1-201ENST00000293748 CCDC42Q96M95 316 aa13.31□□□□□ -0.28
SYNGAP1-201ENST00000293748 USP26Q9BXU7 913 aa13.31□□□□□ -0.28
SYNGAP1-201ENST00000293748 FAM205AQ6ZU69 1335 aa13.31□□□□□ -0.28
SYNGAP1-201ENST00000293748 A0A1W2PRG0 241 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 HLA-DOAP06340 250 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 CYP7A1P22680 504 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms