RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 MSANTD4Q8NCY6 345 aa18.23■□□□□ 0.51
SH3RF1-201ENST00000284637 PPP1R13BQ96KQ4 1090 aa18.23■□□□□ 0.51
SH3RF1-201ENST00000284637 JPH2Q9BR39 696 aaPredicted RBP18.23■□□□□ 0.51
SH3RF1-201ENST00000284637 PCDH11XQ9BZA7 1347 aa18.23■□□□□ 0.51
SH3RF1-201ENST00000284637 PCDH11YQ9BZA8 1340 aa18.23■□□□□ 0.51
SH3RF1-201ENST00000284637 PPP1R21Q6ZMI0 780 aa18.23■□□□□ 0.51
SH3RF1-201ENST00000284637 LPIN2Q92539 896 aa18.23■□□□□ 0.51
SH3RF1-201ENST00000284637 ARHGEF2Q92974 986 aaKnown RBP18.23■□□□□ 0.51
SH3RF1-201ENST00000284637 MPHOSPH6Q99547 160 aaKnown RBP18.23■□□□□ 0.51
SH3RF1-201ENST00000284637 SSX2IPQ9Y2D8 614 aa18.23■□□□□ 0.51
SH3RF1-201ENST00000284637 NBPF14Q5TI25 921 aa18.23■□□□□ 0.51
SH3RF1-201ENST00000284637 KRT25Q7Z3Z0 450 aa18.23■□□□□ 0.51
SH3RF1-201ENST00000284637 TSKSQ9UJT2 592 aa18.23■□□□□ 0.51
SH3RF1-201ENST00000284637 A0A087WWV3 80 aa18.22■□□□□ 0.51
SH3RF1-201ENST00000284637 ZNF853P0CG23 659 aa18.22■□□□□ 0.51
SH3RF1-201ENST00000284637 HSPA1LP34931 641 aa18.22■□□□□ 0.51
SH3RF1-201ENST00000284637 PPP2R5BQ15173 497 aa18.22■□□□□ 0.51
SH3RF1-201ENST00000284637 CLUL1Q15846 466 aa18.22■□□□□ 0.51
SH3RF1-201ENST00000284637 TAOK1Q7L7X3 1001 aa18.22■□□□□ 0.51
SH3RF1-201ENST00000284637 FAN1Q9Y2M0 1017 aa18.22■□□□□ 0.51
SH3RF1-201ENST00000284637 SH3BGRP55822 239 aaPredicted RBP18.22■□□□□ 0.51
SH3RF1-201ENST00000284637 PTPROQ16827 1216 aa18.22■□□□□ 0.51
SH3RF1-201ENST00000284637 CLIC4Q9Y696 253 aa18.22■□□□□ 0.51
SH3RF1-201ENST00000284637 BICRAQ9NZM4 1560 aa18.22■□□□□ 0.51
SH3RF1-201ENST00000284637 FAM47AQ5JRC9 791 aa18.22■□□□□ 0.51
SH3RF1-201ENST00000284637 NEURL1BA8MQ27 555 aa18.22■□□□□ 0.51
SH3RF1-201ENST00000284637 KCNQ3O43525 872 aa18.22■□□□□ 0.51
SH3RF1-201ENST00000284637 ZNF654Q8IZM8 581 aa18.22■□□□□ 0.51
SH3RF1-201ENST00000284637 MGARPQ8TDB4 240 aa18.22■□□□□ 0.51
SH3RF1-201ENST00000284637 SLC52A2Q9HAB3 445 aa18.22■□□□□ 0.51
SH3RF1-201ENST00000284637 LUC7L3O95232 432 aaKnown RBP18.22■□□□□ 0.51
SH3RF1-201ENST00000284637 HSPD1P10809 573 aaKnown RBP18.22■□□□□ 0.51
SH3RF1-201ENST00000284637 MORC3Q14149 939 aa18.22■□□□□ 0.51
SH3RF1-201ENST00000284637 CALCRLQ16602 461 aa18.22■□□□□ 0.51
SH3RF1-201ENST00000284637 PHLPP2Q6ZVD8 1323 aa18.21■□□□□ 0.51
SH3RF1-201ENST00000284637 MCUR1Q96AQ8 359 aa18.21■□□□□ 0.51
SH3RF1-201ENST00000284637 ZNF518AQ6AHZ1 1483 aa18.21■□□□□ 0.51
SH3RF1-201ENST00000284637 BTBD18B2RXH4 712 aa18.21■□□□□ 0.51
SH3RF1-201ENST00000284637 KIF1CO43896 1103 aaKnown RBP18.21■□□□□ 0.51
SH3RF1-201ENST00000284637 CTNNA1P35221 906 aaKnown RBP18.21■□□□□ 0.51
SH3RF1-201ENST00000284637 GKAP1Q5VSY0 366 aaPredicted RBP18.21■□□□□ 0.51
SH3RF1-201ENST00000284637 SRGAP1Q7Z6B7 1085 aa18.21■□□□□ 0.51
SH3RF1-201ENST00000284637 TRIM58Q8NG06 486 aa18.21■□□□□ 0.51
SH3RF1-201ENST00000284637 LSG1Q9H089 658 aaKnown RBP18.21■□□□□ 0.51
SH3RF1-201ENST00000284637 STX10O60499 249 aa18.21■□□□□ 0.51
SH3RF1-201ENST00000284637 GOLGA8FQ08AF8 430 aa18.21■□□□□ 0.51
SH3RF1-201ENST00000284637 GOLGA8DPQ0D2H9 430 aa18.21■□□□□ 0.51
SH3RF1-201ENST00000284637 PTPN21Q16825 1174 aa18.21■□□□□ 0.51
SH3RF1-201ENST00000284637 CROCCP2Q86T23 111 aa18.21■□□□□ 0.51
SH3RF1-201ENST00000284637 TFCP2L1Q9NZI6 479 aa18.21■□□□□ 0.51
SH3RF1-201ENST00000284637 ADCY7P51828 1080 aa18.21■□□□□ 0.5
SH3RF1-201ENST00000284637 MTMR3Q13615 1198 aa18.21■□□□□ 0.5
SH3RF1-201ENST00000284637 RTCBQ9Y3I0 505 aaKnown RBP18.21■□□□□ 0.5
SH3RF1-201ENST00000284637 TRPM2O94759 1503 aa18.2■□□□□ 0.5
SH3RF1-201ENST00000284637 RBM6P78332 1123 aaKnown RBP18.2■□□□□ 0.5
SH3RF1-201ENST00000284637 HHATQ5VTY9 493 aa18.2■□□□□ 0.5
SH3RF1-201ENST00000284637 CCDC110Q8TBZ0 833 aa18.2■□□□□ 0.5
SH3RF1-201ENST00000284637 USTQ9Y2C2 406 aa18.2■□□□□ 0.5
SH3RF1-201ENST00000284637 TRMT2AQ8IZ69 625 aaKnown RBP18.2■□□□□ 0.5
SH3RF1-201ENST00000284637 RNF10Q8N5U6 811 aaKnown RBP18.2■□□□□ 0.5
SH3RF1-201ENST00000284637 EEF2KMTQ96G04 330 aa18.2■□□□□ 0.5
SH3RF1-201ENST00000284637 NCAPGQ9BPX3 1015 aa18.2■□□□□ 0.5
SH3RF1-201ENST00000284637 WDR7Q9Y4E6 1490 aa18.2■□□□□ 0.5
SH3RF1-201ENST00000284637 SCRN1Q12765 414 aa18.2■□□□□ 0.5
SH3RF1-201ENST00000284637 TADA2BQ86TJ2 420 aa18.2■□□□□ 0.5
SH3RF1-201ENST00000284637 BUB1O43683 1085 aa18.2■□□□□ 0.5
SH3RF1-201ENST00000284637 EXOC3O60645 756 aa18.2■□□□□ 0.5
SH3RF1-201ENST00000284637 TFAP4Q01664 338 aa18.2■□□□□ 0.5
SH3RF1-201ENST00000284637 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.2■□□□□ 0.5
SH3RF1-201ENST00000284637 N4BP2L2Q92802 583 aaPredicted RBP18.2■□□□□ 0.5
SH3RF1-201ENST00000284637 TACO1Q9BSH4 297 aaKnown RBP18.2■□□□□ 0.5
SH3RF1-201ENST00000284637 HIP1RO75146 1068 aa18.19■□□□□ 0.5
SH3RF1-201ENST00000284637 KRT15P19012 456 aa18.19■□□□□ 0.5
SH3RF1-201ENST00000284637 ARHGAP44Q17R89 818 aa18.19■□□□□ 0.5
SH3RF1-201ENST00000284637 ANKRD42Q8N9B4 389 aa18.19■□□□□ 0.5
SH3RF1-201ENST00000284637 MYO1AQ9UBC5 1043 aa18.19■□□□□ 0.5
SH3RF1-201ENST00000284637 ADAM21Q9UKJ8 722 aa18.19■□□□□ 0.5
SH3RF1-201ENST00000284637 ARHGEF35A5YM69 484 aa18.19■□□□□ 0.5
SH3RF1-201ENST00000284637 ZBTB22O15209 634 aa18.19■□□□□ 0.5
SH3RF1-201ENST00000284637 ZKSCAN8Q15776 578 aaPredicted RBP18.19■□□□□ 0.5
SH3RF1-201ENST00000284637 SH2D4BQ5SQS7 431 aa18.19■□□□□ 0.5
SH3RF1-201ENST00000284637 SYCE1Q8N0S2 351 aa18.19■□□□□ 0.5
SH3RF1-201ENST00000284637 DNM3Q9UQ16 869 aa18.19■□□□□ 0.5
SH3RF1-201ENST00000284637 ASXL2Q76L83 1435 aa18.19■□□□□ 0.5
SH3RF1-201ENST00000284637 GCNT3O95395 438 aa18.19■□□□□ 0.5
SH3RF1-201ENST00000284637 DENND2CQ68D51 928 aa18.19■□□□□ 0.5
SH3RF1-201ENST00000284637 MYCT1Q8N699 235 aa18.19■□□□□ 0.5
SH3RF1-201ENST00000284637 CDC23Q9UJX2 597 aa18.19■□□□□ 0.5
SH3RF1-201ENST00000284637 SHANK2Q9UPX8 1470 aa18.19■□□□□ 0.5
SH3RF1-201ENST00000284637 CFAP43Q8NDM7 1665 aa18.19■□□□□ 0.5
SH3RF1-201ENST00000284637 FRMD3A2A2Y4 597 aa18.19■□□□□ 0.5
SH3RF1-201ENST00000284637 KCNK3O14649 394 aa18.19■□□□□ 0.5
SH3RF1-201ENST00000284637 SMTNP53814 917 aa18.18■□□□□ 0.5
SH3RF1-201ENST00000284637 RASA3Q14644 834 aa18.18■□□□□ 0.5
SH3RF1-201ENST00000284637 RBM26Q5T8P6 1007 aaKnown RBP18.18■□□□□ 0.5
SH3RF1-201ENST00000284637 PCDHA5Q9Y5H7 936 aa18.18■□□□□ 0.5
SH3RF1-201ENST00000284637 PDIA3P30101 505 aaKnown RBP18.18■□□□□ 0.5
SH3RF1-201ENST00000284637 TPD52P55327 224 aaPredicted RBP18.18■□□□□ 0.5
SH3RF1-201ENST00000284637 LIN9Q5TKA1 542 aa18.18■□□□□ 0.5
SH3RF1-201ENST00000284637 C11orf57Q6ZUT1 292 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms