RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 SPDYE6P0CI01 402 aa23.73■■□□□ 1.39
LYSMD2-201ENST00000267838 ZSCAN29Q8IWY8 852 aaPredicted RBP23.73■■□□□ 1.39
LYSMD2-201ENST00000267838 RBSNQ9H1K0 784 aa23.73■■□□□ 1.39
LYSMD2-201ENST00000267838 FOXP1Q9H334 677 aaPredicted RBP23.73■■□□□ 1.39
LYSMD2-201ENST00000267838 VPS54Q9P1Q0 977 aa23.73■■□□□ 1.39
LYSMD2-201ENST00000267838 BTBD18B2RXH4 712 aa23.73■■□□□ 1.39
LYSMD2-201ENST00000267838 YEATS4O95619 227 aa23.73■■□□□ 1.39
LYSMD2-201ENST00000267838 CXCL9Q07325 125 aa23.73■■□□□ 1.39
LYSMD2-201ENST00000267838 DLGAP5Q15398 846 aa23.73■■□□□ 1.39
LYSMD2-201ENST00000267838 NOSTRINQ8IVI9 506 aa23.73■■□□□ 1.39
LYSMD2-201ENST00000267838 LINC00301Q8NCQ3 95 aa23.73■■□□□ 1.39
LYSMD2-201ENST00000267838 BICD2Q8TD16 824 aa23.73■■□□□ 1.39
LYSMD2-201ENST00000267838 JDP2Q8WYK2 163 aa23.73■■□□□ 1.39
LYSMD2-201ENST00000267838 SHISA4Q96DD7 197 aa23.73■■□□□ 1.39
LYSMD2-201ENST00000267838 DNAJC18Q9H819 358 aa23.73■■□□□ 1.39
LYSMD2-201ENST00000267838 MTMR7Q9Y216 660 aa23.73■■□□□ 1.39
LYSMD2-201ENST00000267838 GREB1LQ9C091 1923 aaPredicted RBP23.72■■□□□ 1.39
LYSMD2-201ENST00000267838 COL2A1P02458 1487 aaPredicted RBP23.72■■□□□ 1.39
LYSMD2-201ENST00000267838 PALM3A6NDB9 673 aaPredicted RBP23.72■■□□□ 1.39
LYSMD2-201ENST00000267838 LIG1P18858 919 aa23.72■■□□□ 1.39
LYSMD2-201ENST00000267838 STK38Q15208 465 aa23.72■■□□□ 1.39
LYSMD2-201ENST00000267838 ANO1Q5XXA6 986 aa23.72■■□□□ 1.39
LYSMD2-201ENST00000267838 PDLIM2Q96JY6 352 aa23.72■■□□□ 1.39
LYSMD2-201ENST00000267838 PHF20Q9BVI0 1012 aa23.72■■□□□ 1.39
LYSMD2-201ENST00000267838 TMOD2Q9NZR1 351 aa23.72■■□□□ 1.39
LYSMD2-201ENST00000267838 ATRNL1Q5VV63 1379 aa23.71■■□□□ 1.39
LYSMD2-201ENST00000267838 MSNP26038 577 aaKnown RBP23.71■■□□□ 1.39
LYSMD2-201ENST00000267838 PFKFB3Q16875 520 aaPredicted RBP23.71■■□□□ 1.39
LYSMD2-201ENST00000267838 CCDC17Q96LX7 622 aa23.71■■□□□ 1.39
LYSMD2-201ENST00000267838 LZTS2Q9BRK4 669 aa23.71■■□□□ 1.39
LYSMD2-201ENST00000267838 LETM1O95202 739 aaPredicted RBP23.7■■□□□ 1.39
LYSMD2-201ENST00000267838 SCG2P13521 617 aa23.7■■□□□ 1.39
LYSMD2-201ENST00000267838 CIAPIN1Q6FI81 312 aa23.7■■□□□ 1.39
LYSMD2-201ENST00000267838 FOXP4Q8IVH2 680 aaPredicted RBP23.7■■□□□ 1.39
LYSMD2-201ENST00000267838 KCNG4Q8TDN1 519 aa23.7■■□□□ 1.39
LYSMD2-201ENST00000267838 PARP1P09874 1014 aaKnown RBP23.7■■□□□ 1.38
LYSMD2-201ENST00000267838 SLURP2P0DP57 97 aa23.7■■□□□ 1.38
LYSMD2-201ENST00000267838 ME1P48163 572 aa23.7■■□□□ 1.38
LYSMD2-201ENST00000267838 TRIM34Q9BYJ4 488 aa23.7■■□□□ 1.38
LYSMD2-201ENST00000267838 LTBP3Q9NS15 1303 aa23.69■■□□□ 1.38
LYSMD2-201ENST00000267838 MPHOSPH10O00566 681 aaKnown RBP23.69■■□□□ 1.38
LYSMD2-201ENST00000267838 TTLL1O95922 423 aa23.69■■□□□ 1.38
LYSMD2-201ENST00000267838 ZNF70Q9UC06 446 aaPredicted RBP23.69■■□□□ 1.38
LYSMD2-201ENST00000267838 SPTLC2O15270 562 aa23.68■■□□□ 1.38
LYSMD2-201ENST00000267838 KRT2P35908 639 aa23.68■■□□□ 1.38
LYSMD2-201ENST00000267838 NR5A1Q13285 461 aa23.68■■□□□ 1.38
LYSMD2-201ENST00000267838 SF3A1Q15459 793 aaKnown RBP23.68■■□□□ 1.38
LYSMD2-201ENST00000267838 MTMR14Q8NCE2 650 aa23.68■■□□□ 1.38
LYSMD2-201ENST00000267838 OXER1Q8TDS5 423 aa23.68■■□□□ 1.38
LYSMD2-201ENST00000267838 PIBF1Q8WXW3 757 aa23.68■■□□□ 1.38
LYSMD2-201ENST00000267838 PCDHA7Q9UN72 937 aa23.68■■□□□ 1.38
LYSMD2-201ENST00000267838 BAZ2BQ9UIF8 2168 aaKnown RBP23.68■■□□□ 1.38
LYSMD2-201ENST00000267838 ARFGEF1Q9Y6D6 1849 aa23.68■■□□□ 1.38
LYSMD2-201ENST00000267838 CLRN2A0PK11 232 aa23.68■■□□□ 1.38
LYSMD2-201ENST00000267838 FAM196BA6NMK8 535 aa23.68■■□□□ 1.38
LYSMD2-201ENST00000267838 KLRF2D3W0D1 207 aa23.68■■□□□ 1.38
LYSMD2-201ENST00000267838 GOLGA8HP0CJ92 632 aa23.68■■□□□ 1.38
LYSMD2-201ENST00000267838 RASGRP2Q7LDG7 609 aa23.68■■□□□ 1.38
LYSMD2-201ENST00000267838 METTL16Q86W50 562 aaKnown RBP23.68■■□□□ 1.38
LYSMD2-201ENST00000267838 CLEC10AQ8IUN9 316 aa23.68■■□□□ 1.38
LYSMD2-201ENST00000267838 DACT1Q9NYF0 836 aa23.68■■□□□ 1.38
LYSMD2-201ENST00000267838 CLIP2Q9UDT6 1046 aa23.68■■□□□ 1.38
LYSMD2-201ENST00000267838 TCP10L2B9ZVM9 353 aa23.67■■□□□ 1.38
LYSMD2-201ENST00000267838 EIF6P56537 245 aaKnown RBP23.67■■□□□ 1.38
LYSMD2-201ENST00000267838 TNIP1Q15025 636 aa23.67■■□□□ 1.38
LYSMD2-201ENST00000267838 SLC39A14Q15043 492 aa23.67■■□□□ 1.38
LYSMD2-201ENST00000267838 SLC35G1Q2M3R5 365 aa23.67■■□□□ 1.38
LYSMD2-201ENST00000267838 SPDYE2Q495Y8 402 aa23.67■■□□□ 1.38
LYSMD2-201ENST00000267838 CERKLQ49MI3 558 aaPredicted RBP23.67■■□□□ 1.38
LYSMD2-201ENST00000267838 PPP4R3BQ5MIZ7 849 aa23.67■■□□□ 1.38
LYSMD2-201ENST00000267838 TATDN1Q6P1N9 297 aa23.67■■□□□ 1.38
LYSMD2-201ENST00000267838 USP17L2Q6R6M4 530 aa23.67■■□□□ 1.38
LYSMD2-201ENST00000267838 CCAR1Q8IX12 1150 aaKnown RBP23.67■■□□□ 1.38
LYSMD2-201ENST00000267838 NLGN2Q8NFZ4 835 aa23.67■■□□□ 1.38
LYSMD2-201ENST00000267838 BRMS1Q9HCU9 246 aa23.67■■□□□ 1.38
LYSMD2-201ENST00000267838 DDX19AQ9NUU7 478 aaKnown RBP23.67■■□□□ 1.38
LYSMD2-201ENST00000267838 CYTH3O43739 400 aa23.66■■□□□ 1.38
LYSMD2-201ENST00000267838 ADALQ6DHV7 355 aa23.66■■□□□ 1.38
LYSMD2-201ENST00000267838 LRRC47Q8N1G4 583 aaKnown RBP23.66■■□□□ 1.38
LYSMD2-201ENST00000267838 SPZ1Q9BXG8 430 aa23.66■■□□□ 1.38
LYSMD2-201ENST00000267838 USP17L5A8MUK1 530 aa23.65■■□□□ 1.38
LYSMD2-201ENST00000267838 PDHBP11177 359 aa23.65■■□□□ 1.38
LYSMD2-201ENST00000267838 RASSF7Q02833 373 aa23.65■■□□□ 1.38
LYSMD2-201ENST00000267838 RILPL1Q5EBL4 403 aa23.65■■□□□ 1.38
LYSMD2-201ENST00000267838 CSRNP1Q96S65 589 aa23.65■■□□□ 1.38
LYSMD2-201ENST00000267838 NUP62CLQ9H1M0 184 aa23.65■■□□□ 1.38
LYSMD2-201ENST00000267838 MYH4Q9Y623 1939 aa23.65■■□□□ 1.38
LYSMD2-201ENST00000267838 NR1I2O75469 434 aa23.65■■□□□ 1.38
LYSMD2-201ENST00000267838 VEGFAP15692 232 aaPredicted RBP23.65■■□□□ 1.38
LYSMD2-201ENST00000267838 SMARCA1P28370 1054 aa23.65■■□□□ 1.38
LYSMD2-201ENST00000267838 PTPAQ15257 358 aa23.65■■□□□ 1.38
LYSMD2-201ENST00000267838 FAM151AQ8WW52 585 aa23.65■■□□□ 1.38
LYSMD2-201ENST00000267838 TSPY26PQ9H489 355 aa23.65■■□□□ 1.38
LYSMD2-201ENST00000267838 SH3GLB2Q9NR46 395 aa23.65■■□□□ 1.38
LYSMD2-201ENST00000267838 A0A1W2PQ27 194 aa23.64■■□□□ 1.37
LYSMD2-201ENST00000267838 A0A1W2PQ64 194 aa23.64■■□□□ 1.37
LYSMD2-201ENST00000267838 A0A1W2PQD8 194 aa23.64■■□□□ 1.37
LYSMD2-201ENST00000267838 TPM2P07951 284 aa23.64■■□□□ 1.37
LYSMD2-201ENST00000267838 TOB1P50616 345 aaPredicted RBP23.64■■□□□ 1.37
LYSMD2-201ENST00000267838 NPY5RQ15761 445 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms