RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 FAM71BQ8TC56 605 aa19.12■□□□□ 0.65
SRF-201ENST00000265354 ZNF609O15014 1411 aa19.12■□□□□ 0.65
SRF-201ENST00000265354 TRAF5O00463 557 aa19.12■□□□□ 0.65
SRF-201ENST00000265354 ZNF622Q969S3 477 aaKnown RBP eCLIP19.12■□□□□ 0.65
SRF-201ENST00000265354 SELENOSQ9BQE4 189 aa19.12■□□□□ 0.65
SRF-201ENST00000265354 EIF3CLB5ME19 914 aaKnown RBP19.11■□□□□ 0.65
SRF-201ENST00000265354 TSPY3P0CV98 308 aa19.11■□□□□ 0.65
SRF-201ENST00000265354 TSPY8P0CW00 308 aa19.11■□□□□ 0.65
SRF-201ENST00000265354 EIF3CQ99613 913 aaKnown RBP19.11■□□□□ 0.65
SRF-201ENST00000265354 FEZ2Q9UHY8 353 aaPredicted RBP19.11■□□□□ 0.65
SRF-201ENST00000265354 NIP7Q9Y221 180 aaKnown RBP eCLIP19.11■□□□□ 0.65
SRF-201ENST00000265354 GDAQ9Y2T3 454 aa19.11■□□□□ 0.65
SRF-201ENST00000265354 ADGRG1Q9Y653 693 aa19.11■□□□□ 0.65
SRF-201ENST00000265354 EXOSC10Q01780 885 aaKnown RBP19.11■□□□□ 0.65
SRF-201ENST00000265354 FCHSD1Q86WN1 690 aa19.11■□□□□ 0.65
SRF-201ENST00000265354 CAPS2Q9BXY5 557 aa19.11■□□□□ 0.65
SRF-201ENST00000265354 TCEAL9Q9UHQ7 104 aa19.11■□□□□ 0.65
SRF-201ENST00000265354 SH3TC1Q8TE82 1336 aa19.11■□□□□ 0.65
SRF-201ENST00000265354 SHROOM2Q13796 1616 aa19.11■□□□□ 0.65
SRF-201ENST00000265354 FRMD3A2A2Y4 597 aa19.11■□□□□ 0.65
SRF-201ENST00000265354 TRIM10Q9UDY6 481 aa19.11■□□□□ 0.65
SRF-201ENST00000265354 MRFAP1Q9Y605 127 aa19.11■□□□□ 0.65
SRF-201ENST00000265354 USP17L12C9JPN9 530 aa19.11■□□□□ 0.65
SRF-201ENST00000265354 USP17L21D6R901 530 aa19.11■□□□□ 0.65
SRF-201ENST00000265354 E7EVH7 732 aa19.11■□□□□ 0.65
SRF-201ENST00000265354 TUBB4BP68371 445 aa19.11■□□□□ 0.65
SRF-201ENST00000265354 TMEM266Q2M3C6 531 aa19.11■□□□□ 0.65
SRF-201ENST00000265354 FAM212AQ96EL1 285 aa19.11■□□□□ 0.65
SRF-201ENST00000265354 ATP8B1O43520 1251 aa19.1■□□□□ 0.65
SRF-201ENST00000265354 ICE2Q659A1 982 aa19.1■□□□□ 0.65
SRF-201ENST00000265354 AATFQ9NY61 560 aaKnown RBP eCLIP19.1■□□□□ 0.65
SRF-201ENST00000265354 FAM205CA6NFA0 338 aa19.1■□□□□ 0.65
SRF-201ENST00000265354 TBC1D8O95759 1140 aa19.1■□□□□ 0.65
SRF-201ENST00000265354 MROH7-TTC4A0A0A0MT08 1334 aa19.1■□□□□ 0.65
SRF-201ENST00000265354 TRIM49BA6NDI0 452 aa19.1■□□□□ 0.65
SRF-201ENST00000265354 ZSCAN29Q8IWY8 852 aaPredicted RBP19.1■□□□□ 0.65
SRF-201ENST00000265354 CTNNBL1Q8WYA6 563 aaPredicted RBP19.1■□□□□ 0.65
SRF-201ENST00000265354 TCHHQ07283 1943 aa19.1■□□□□ 0.65
SRF-201ENST00000265354 H2AFXP16104 143 aaPredicted RBP19.09■□□□□ 0.65
SRF-201ENST00000265354 TNNI2P48788 182 aa19.09■□□□□ 0.65
SRF-201ENST00000265354 FGFR1OPO95684 399 aaKnown RBP19.09■□□□□ 0.65
SRF-201ENST00000265354 GOLGA6L10A0A0M3HER8 536 aa19.09■□□□□ 0.65
SRF-201ENST00000265354 SH2B2O14492 632 aaPredicted RBP19.09■□□□□ 0.65
SRF-201ENST00000265354 TCIRG1Q13488 830 aa19.09■□□□□ 0.65
SRF-201ENST00000265354 KRT31Q15323 416 aa19.09■□□□□ 0.65
SRF-201ENST00000265354 TSGA10IPQ3SY00 556 aa19.09■□□□□ 0.65
SRF-201ENST00000265354 NELFCDQ8IXH7 590 aa19.09■□□□□ 0.65
SRF-201ENST00000265354 COL3A1P02461 1466 aaPredicted RBP19.08■□□□□ 0.65
SRF-201ENST00000265354 RESP18Q5W5W9 173 aa19.08■□□□□ 0.65
SRF-201ENST00000265354 RAD9BQ6WBX8 426 aa19.08■□□□□ 0.65
SRF-201ENST00000265354 CCDC25Q86WR0 208 aa19.08■□□□□ 0.65
SRF-201ENST00000265354 CHP1Q99653 195 aa19.08■□□□□ 0.65
SRF-201ENST00000265354 HAUS4Q9H6D7 363 aa19.08■□□□□ 0.65
SRF-201ENST00000265354 PIH1D3Q9NQM4 214 aaKnown RBP19.08■□□□□ 0.65
SRF-201ENST00000265354 PTPRMP28827 1452 aa19.08■□□□□ 0.65
SRF-201ENST00000265354 MMP1P03956 469 aa19.08■□□□□ 0.65
SRF-201ENST00000265354 EIF6P56537 245 aaKnown RBP19.08■□□□□ 0.65
SRF-201ENST00000265354 INF2Q27J81 1249 aa19.08■□□□□ 0.65
SRF-201ENST00000265354 ADAT2Q7Z6V5 191 aaKnown RBP19.08■□□□□ 0.65
SRF-201ENST00000265354 REXO1L1PQ8IX06 675 aa19.08■□□□□ 0.65
SRF-201ENST00000265354 L2HGDHQ9H9P8 463 aa19.08■□□□□ 0.65
SRF-201ENST00000265354 EFCC1Q9HA90 598 aa19.08■□□□□ 0.65
SRF-201ENST00000265354 SLC39A2Q9NP94 309 aa19.08■□□□□ 0.65
SRF-201ENST00000265354 ZCCHC11Q5TAX3 1644 aaKnown RBP19.08■□□□□ 0.64
SRF-201ENST00000265354 CCNT1O60563 726 aaKnown RBP19.08■□□□□ 0.64
SRF-201ENST00000265354 ZNF76P36508 570 aa19.08■□□□□ 0.64
SRF-201ENST00000265354 PUM3Q15397 648 aaKnown RBP19.08■□□□□ 0.64
SRF-201ENST00000265354 UHMK1Q8TAS1 419 aaKnown RBP19.08■□□□□ 0.64
SRF-201ENST00000265354 CRNKL1Q9BZJ0 848 aaKnown RBP19.08■□□□□ 0.64
SRF-201ENST00000265354 MYO3AQ8NEV4 1616 aa19.08■□□□□ 0.64
SRF-201ENST00000265354 ADGRB3O60242 1522 aa19.08■□□□□ 0.64
SRF-201ENST00000265354 MCAMP43121 646 aa19.08■□□□□ 0.64
SRF-201ENST00000265354 CLNS1AP54105 237 aaKnown RBP19.08■□□□□ 0.64
SRF-201ENST00000265354 PNMA8AQ86V59 439 aaPredicted RBP19.08■□□□□ 0.64
SRF-201ENST00000265354 ARHGEF25Q86VW2 580 aa19.08■□□□□ 0.64
SRF-201ENST00000265354 TC2NQ8N9U0 490 aa19.08■□□□□ 0.64
SRF-201ENST00000265354 NOA1Q8NC60 698 aaKnown RBP19.08■□□□□ 0.64
SRF-201ENST00000265354 PYM1Q9BRP8 204 aaKnown RBP19.08■□□□□ 0.64
SRF-201ENST00000265354 GSTTP1A0A1W2PQM5 241 aa19.07■□□□□ 0.64
SRF-201ENST00000265354 CEP104O60308 925 aa19.07■□□□□ 0.64
SRF-201ENST00000265354 MFAP3LO75121 409 aa19.07■□□□□ 0.64
SRF-201ENST00000265354 NDUFA10O95299 355 aa19.07■□□□□ 0.64
SRF-201ENST00000265354 GOLGA8HP0CJ92 632 aa19.07■□□□□ 0.64
SRF-201ENST00000265354 GYG1P46976 350 aa19.07■□□□□ 0.64
SRF-201ENST00000265354 MAP3K9P80192 1104 aa19.07■□□□□ 0.64
SRF-201ENST00000265354 MED4Q9NPJ6 270 aa19.07■□□□□ 0.64
SRF-201ENST00000265354 TFCP2L1Q9NZI6 479 aa19.07■□□□□ 0.64
SRF-201ENST00000265354 PPARAQ07869 468 aa19.07■□□□□ 0.64
SRF-201ENST00000265354 CEP85LQ5SZL2 805 aa19.07■□□□□ 0.64
SRF-201ENST00000265354 USPL1Q5W0Q7 1092 aa19.07■□□□□ 0.64
SRF-201ENST00000265354 CABS1Q96KC9 395 aa19.07■□□□□ 0.64
SRF-201ENST00000265354 RAB34Q9BZG1 259 aa19.07■□□□□ 0.64
SRF-201ENST00000265354 KIF4AO95239 1232 aa19.07■□□□□ 0.64
SRF-201ENST00000265354 PARP1P09874 1014 aaKnown RBP19.07■□□□□ 0.64
SRF-201ENST00000265354 KRT13P13646 458 aa19.07■□□□□ 0.64
SRF-201ENST00000265354 ERCC5P28715 1186 aaPredicted RBP19.07■□□□□ 0.64
SRF-201ENST00000265354 FXR1P51114 621 aaKnown RBP eCLIP19.07■□□□□ 0.64
SRF-201ENST00000265354 GUCY2DQ02846 1103 aa19.07■□□□□ 0.64
SRF-201ENST00000265354 CCDC152Q4G0S7 254 aa19.07■□□□□ 0.64
SRF-201ENST00000265354 VPS36Q86VN1 386 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms