RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 PPP1R3GB7ZBB8 358 aa17.32■□□□□ 0.36
DDX56-201ENST00000258772 CDKAL1Q5VV42 579 aa17.32■□□□□ 0.36
DDX56-201ENST00000258772 ARGLU1Q9NWB6 273 aaPredicted RBP17.32■□□□□ 0.36
DDX56-201ENST00000258772 ADD3Q9UEY8 706 aaKnown RBP17.32■□□□□ 0.36
DDX56-201ENST00000258772 COL16A1Q07092 1604 aaPredicted RBP17.32■□□□□ 0.36
DDX56-201ENST00000258772 TPM1P09493 284 aa17.32■□□□□ 0.36
DDX56-201ENST00000258772 PBX1P40424 430 aa17.32■□□□□ 0.36
DDX56-201ENST00000258772 ATP2C1P98194 919 aaPredicted RBP17.32■□□□□ 0.36
DDX56-201ENST00000258772 PTGDRQ13258 359 aa17.32■□□□□ 0.36
DDX56-201ENST00000258772 CLEC4GQ6UXB4 293 aa17.32■□□□□ 0.36
DDX56-201ENST00000258772 ZNF771Q7L3S4 317 aaPredicted RBP17.32■□□□□ 0.36
DDX56-201ENST00000258772 SRBD1Q8N5C6 995 aaKnown RBP17.32■□□□□ 0.36
DDX56-201ENST00000258772 KIFC2Q96AC6 838 aa17.32■□□□□ 0.36
DDX56-201ENST00000258772 DESI2Q9BSY9 194 aa17.32■□□□□ 0.36
DDX56-201ENST00000258772 MYH13Q9UKX3 1938 aa17.31■□□□□ 0.36
DDX56-201ENST00000258772 CNTNAP5Q8WYK1 1306 aa17.31■□□□□ 0.36
DDX56-201ENST00000258772 RBL2Q08999 1139 aa17.31■□□□□ 0.36
DDX56-201ENST00000258772 MTF1Q14872 753 aa17.31■□□□□ 0.36
DDX56-201ENST00000258772 SMYD4Q8IYR2 804 aaPredicted RBP17.31■□□□□ 0.36
DDX56-201ENST00000258772 IGSF22Q8N9C0 903 aa17.31■□□□□ 0.36
DDX56-201ENST00000258772 MARCH10Q8NA82 808 aaPredicted RBP17.31■□□□□ 0.36
DDX56-201ENST00000258772 CTAGE1Q96RT6 745 aa17.31■□□□□ 0.36
DDX56-201ENST00000258772 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.31■□□□□ 0.36
DDX56-201ENST00000258772 MRFAP1Q9Y605 127 aa17.31■□□□□ 0.36
DDX56-201ENST00000258772 SEMA3EO15041 775 aa17.31■□□□□ 0.36
DDX56-201ENST00000258772 ZRANB2O95218 330 aaKnown RBP eCLIP17.31■□□□□ 0.36
DDX56-201ENST00000258772 PPFIBP1Q86W92 1011 aa17.31■□□□□ 0.36
DDX56-201ENST00000258772 SOWAHDA6NJG2 315 aa17.3■□□□□ 0.36
DDX56-201ENST00000258772 ORC4O43929 436 aa17.3■□□□□ 0.36
DDX56-201ENST00000258772 PNMA6AP0CW24 399 aaPredicted RBP17.3■□□□□ 0.36
DDX56-201ENST00000258772 EVX2Q03828 476 aa17.3■□□□□ 0.36
DDX56-201ENST00000258772 TMCO3Q6UWJ1 677 aa17.3■□□□□ 0.36
DDX56-201ENST00000258772 CTCFLQ8NI51 663 aaPredicted RBP17.3■□□□□ 0.36
DDX56-201ENST00000258772 NSUN4Q96CB9 384 aaKnown RBP17.3■□□□□ 0.36
DDX56-201ENST00000258772 NAA15Q9BXJ9 866 aaKnown RBP17.3■□□□□ 0.36
DDX56-201ENST00000258772 NMT2O60551 498 aa17.3■□□□□ 0.36
DDX56-201ENST00000258772 CCDC175P0C221 793 aa17.3■□□□□ 0.36
DDX56-201ENST00000258772 KARSQ15046 597 aaKnown RBP17.3■□□□□ 0.36
DDX56-201ENST00000258772 E2F4Q16254 413 aa17.3■□□□□ 0.36
DDX56-201ENST00000258772 FBXO33Q7Z6M2 555 aa17.3■□□□□ 0.36
DDX56-201ENST00000258772 CPLX3Q8WVH0 158 aa17.3■□□□□ 0.36
DDX56-201ENST00000258772 STAMQ92783 540 aa17.3■□□□□ 0.36
DDX56-201ENST00000258772 MRPL44Q9H9J2 332 aaKnown RBP17.3■□□□□ 0.36
DDX56-201ENST00000258772 SPATA31A1Q5TZJ5 1347 aa17.29■□□□□ 0.36
DDX56-201ENST00000258772 FILIP1LQ4L180 1135 aa17.29■□□□□ 0.36
DDX56-201ENST00000258772 IQUBQ8NA54 791 aa17.29■□□□□ 0.36
DDX56-201ENST00000258772 CELF1Q92879 486 aaKnown RBP17.29■□□□□ 0.36
DDX56-201ENST00000258772 ST7Q9NRC1 585 aa17.29■□□□□ 0.36
DDX56-201ENST00000258772 XDHP47989 1333 aa17.29■□□□□ 0.36
DDX56-201ENST00000258772 SCG2P13521 617 aa17.29■□□□□ 0.36
DDX56-201ENST00000258772 TRAPPC10P48553 1259 aa17.29■□□□□ 0.36
DDX56-201ENST00000258772 NLRP5P59047 1200 aa17.29■□□□□ 0.36
DDX56-201ENST00000258772 MECOMQ03112 1051 aa17.29■□□□□ 0.36
DDX56-201ENST00000258772 FAM47AQ5JRC9 791 aa17.29■□□□□ 0.36
DDX56-201ENST00000258772 RAD9BQ6WBX8 426 aa17.29■□□□□ 0.36
DDX56-201ENST00000258772 PIK3AP1Q6ZUJ8 805 aa17.29■□□□□ 0.36
DDX56-201ENST00000258772 DCP1AQ9NPI6 582 aaPredicted RBP17.29■□□□□ 0.36
DDX56-201ENST00000258772 THRAP3Q9Y2W1 955 aaKnown RBP17.29■□□□□ 0.36
DDX56-201ENST00000258772 ADGRG1Q9Y653 693 aa17.29■□□□□ 0.36
DDX56-201ENST00000258772 SCN7AQ01118 1682 aa17.28■□□□□ 0.36
DDX56-201ENST00000258772 PPP2R3AQ06190 1150 aa17.28■□□□□ 0.36
DDX56-201ENST00000258772 RSRC2Q7L4I2 434 aaKnown RBP17.28■□□□□ 0.36
DDX56-201ENST00000258772 IRX2Q9BZI1 471 aaPredicted RBP17.28■□□□□ 0.36
DDX56-201ENST00000258772 VEGFAP15692 232 aaPredicted RBP17.27■□□□□ 0.36
DDX56-201ENST00000258772 GPR161Q8N6U8 529 aaKnown RBP17.27■□□□□ 0.36
DDX56-201ENST00000258772 CRNKL1Q9BZJ0 848 aaKnown RBP17.27■□□□□ 0.36
DDX56-201ENST00000258772 EPC1Q9H2F5 836 aa17.27■□□□□ 0.36
DDX56-201ENST00000258772 BLZF1Q9H2G9 400 aa17.27■□□□□ 0.36
DDX56-201ENST00000258772 CTNND2Q9UQB3 1225 aa17.27■□□□□ 0.36
DDX56-201ENST00000258772 CASZ1Q86V15 1759 aa17.27■□□□□ 0.36
DDX56-201ENST00000258772 COL22A1Q8NFW1 1626 aaPredicted RBP17.27■□□□□ 0.36
DDX56-201ENST00000258772 MFAP3LO75121 409 aa17.27■□□□□ 0.35
DDX56-201ENST00000258772 KLRK1P26718 216 aa17.27■□□□□ 0.35
DDX56-201ENST00000258772 PLA2G4AP47712 749 aa17.27■□□□□ 0.35
DDX56-201ENST00000258772 IL17AQ16552 155 aa17.27■□□□□ 0.35
DDX56-201ENST00000258772 PFKFB3Q16875 520 aaPredicted RBP17.27■□□□□ 0.35
DDX56-201ENST00000258772 PDXDC2PQ6P474 469 aa17.27■□□□□ 0.35
DDX56-201ENST00000258772 CCDC12Q8WUD4 166 aaPredicted RBP17.27■□□□□ 0.35
DDX56-201ENST00000258772 MTRQ99707 1265 aa17.27■□□□□ 0.35
DDX56-201ENST00000258772 MYH8P13535 1937 aa17.27■□□□□ 0.35
DDX56-201ENST00000258772 LRRC10BA6NIK2 292 aa17.26■□□□□ 0.35
DDX56-201ENST00000258772 CASP14P31944 242 aa17.26■□□□□ 0.35
DDX56-201ENST00000258772 MCM7P33993 719 aa17.26■□□□□ 0.35
DDX56-201ENST00000258772 RRAGBQ5VZM2 374 aa17.26■□□□□ 0.35
DDX56-201ENST00000258772 PYM1Q9BRP8 204 aaKnown RBP17.26■□□□□ 0.35
DDX56-201ENST00000258772 LZTFL1Q9NQ48 299 aa17.26■□□□□ 0.35
DDX56-201ENST00000258772 ATP8A2Q9NTI2 1148 aa17.26■□□□□ 0.35
DDX56-201ENST00000258772 ADAMTS3O15072 1205 aa17.26■□□□□ 0.35
DDX56-201ENST00000258772 RASGRP2Q7LDG7 609 aa17.26■□□□□ 0.35
DDX56-201ENST00000258772 SMARCC1Q92922 1105 aaPredicted RBP17.26■□□□□ 0.35
DDX56-201ENST00000258772 ITIH6Q6UXX5 1313 aa17.26■□□□□ 0.35
DDX56-201ENST00000258772 ATP8B1O43520 1251 aa17.25■□□□□ 0.35
DDX56-201ENST00000258772 GTPBP6O43824 516 aaPredicted RBP17.25■□□□□ 0.35
DDX56-201ENST00000258772 COBLO75128 1261 aa17.25■□□□□ 0.35
DDX56-201ENST00000258772 GYPCP04921 128 aa17.25■□□□□ 0.35
DDX56-201ENST00000258772 CYP2D6P10635 497 aa17.25■□□□□ 0.35
DDX56-201ENST00000258772 GTF2E1P29083 439 aaPredicted RBP17.25■□□□□ 0.35
DDX56-201ENST00000258772 KRT31Q15323 416 aa17.25■□□□□ 0.35
DDX56-201ENST00000258772 SLC10A5Q5PT55 438 aa17.25■□□□□ 0.35
DDX56-201ENST00000258772 TEX35Q5T0J7 233 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms