RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.13□□□□□ -0.153e-6■■■■■ 38.3
NIP7-201ENST00000254940 GPT2Q8TD30 523 aa14.13□□□□□ -0.15
NIP7-201ENST00000254940 PIBF1Q8WXW3 757 aa14.13□□□□□ -0.15
NIP7-201ENST00000254940 CABP5Q9NP86 173 aa14.13□□□□□ -0.15
NIP7-201ENST00000254940 ABT1Q9ULW3 272 aaKnown RBP14.13□□□□□ -0.15
NIP7-201ENST00000254940 SNCAIPQ9Y6H5 919 aa14.13□□□□□ -0.15
NIP7-201ENST00000254940 COL2A1P02458 1487 aaPredicted RBP14.13□□□□□ -0.15
NIP7-201ENST00000254940 VPS37CA5D8V6 355 aaPredicted RBP14.13□□□□□ -0.15
NIP7-201ENST00000254940 GOLGA8HP0CJ92 632 aa14.13□□□□□ -0.15
NIP7-201ENST00000254940 ICA1Q05084 483 aa14.13□□□□□ -0.15
NIP7-201ENST00000254940 WTAPQ15007 396 aa14.13□□□□□ -0.15
NIP7-201ENST00000254940 KIAA1755Q5JYT7 1200 aa14.13□□□□□ -0.15
NIP7-201ENST00000254940 RCSD1Q6JBY9 416 aa14.13□□□□□ -0.15
NIP7-201ENST00000254940 METTL16Q86W50 562 aaKnown RBP14.13□□□□□ -0.15
NIP7-201ENST00000254940 CCDC82Q8N4S0 544 aa14.13□□□□□ -0.15
NIP7-201ENST00000254940 NEDD1Q8NHV4 660 aa14.13□□□□□ -0.15
NIP7-201ENST00000254940 IGDCC4Q8TDY8 1250 aa14.13□□□□□ -0.15
NIP7-201ENST00000254940 LY9Q9HBG7 655 aa14.13□□□□□ -0.15
NIP7-201ENST00000254940 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.13□□□□□ -0.15
NIP7-201ENST00000254940 KLF18A0A0U1RQI7 1052 aa14.12□□□□□ -0.15
NIP7-201ENST00000254940 SH2B2O14492 632 aaPredicted RBP14.12□□□□□ -0.15
NIP7-201ENST00000254940 HUNKP57058 714 aa14.12□□□□□ -0.15
NIP7-201ENST00000254940 MAP3K9P80192 1104 aa14.12□□□□□ -0.15
NIP7-201ENST00000254940 MICU3Q86XE3 530 aa14.12□□□□□ -0.15
NIP7-201ENST00000254940 IQCA1Q86XH1 822 aa14.12□□□□□ -0.15
NIP7-201ENST00000254940 GAS2L3Q86XJ1 694 aa14.12□□□□□ -0.15
NIP7-201ENST00000254940 TMEM47Q9BQJ4 181 aa14.12□□□□□ -0.15
NIP7-201ENST00000254940 ZNF287Q9HBT7 754 aa14.12□□□□□ -0.15
NIP7-201ENST00000254940 PICK1Q9NRD5 415 aa14.12□□□□□ -0.15
NIP7-201ENST00000254940 FRMPD2Q68DX3 1309 aaPredicted RBP14.12□□□□□ -0.15
NIP7-201ENST00000254940 TRPM7Q96QT4 1865 aa14.12□□□□□ -0.15
NIP7-201ENST00000254940 TBC1D12O60347 775 aa14.12□□□□□ -0.15
NIP7-201ENST00000254940 GADD45BO75293 160 aaPredicted RBP14.12□□□□□ -0.15
NIP7-201ENST00000254940 IREB2P48200 963 aaKnown RBP14.12□□□□□ -0.15
NIP7-201ENST00000254940 SPP2Q13103 211 aa14.12□□□□□ -0.15
NIP7-201ENST00000254940 IFIT1BQ5T764 474 aaKnown RBP14.12□□□□□ -0.15
NIP7-201ENST00000254940 FEZ1Q99689 392 aa14.12□□□□□ -0.15
NIP7-201ENST00000254940 MTMR4Q9NYA4 1195 aa14.12□□□□□ -0.15
NIP7-201ENST00000254940 CAVIN1Q6NZI2 390 aaKnown RBP14.11□□□□□ -0.15
NIP7-201ENST00000254940 ARMC9Q7Z3E5 817 aa14.11□□□□□ -0.15
NIP7-201ENST00000254940 SCYL3Q8IZE3 742 aa14.11□□□□□ -0.15
NIP7-201ENST00000254940 C2orf69Q8N8R5 385 aa14.11□□□□□ -0.15
NIP7-201ENST00000254940 CNPY2Q9Y2B0 182 aa14.11□□□□□ -0.15
NIP7-201ENST00000254940 CSADQ9Y600 493 aa14.11□□□□□ -0.15
NIP7-201ENST00000254940 DOCK1Q14185 1865 aa14.11□□□□□ -0.15
NIP7-201ENST00000254940 ERICH2A1L162 156 aa14.11□□□□□ -0.15
NIP7-201ENST00000254940 PTPRAP18433 802 aa14.11□□□□□ -0.15
NIP7-201ENST00000254940 MAP3K10Q02779 954 aa14.11□□□□□ -0.15
NIP7-201ENST00000254940 MTMR2Q13614 643 aa14.11□□□□□ -0.15
NIP7-201ENST00000254940 SEC23AQ15436 765 aa14.11□□□□□ -0.15
NIP7-201ENST00000254940 OTUD7BQ6GQQ9 843 aa14.11□□□□□ -0.15
NIP7-201ENST00000254940 TMEM179Q6ZVK1 233 aa14.11□□□□□ -0.15
NIP7-201ENST00000254940 SH2B1Q9NRF2 756 aaPredicted RBP14.11□□□□□ -0.15
NIP7-201ENST00000254940 hCG_1642624A0A1W2PR95 340 aa14.1□□□□□ -0.15
NIP7-201ENST00000254940 CTNND1O60716 968 aaKnown RBP14.1□□□□□ -0.15
NIP7-201ENST00000254940 PDIA3P30101 505 aaKnown RBP14.1□□□□□ -0.15
NIP7-201ENST00000254940 GJA5P36382 358 aa14.1□□□□□ -0.15
NIP7-201ENST00000254940 ZSCAN31Q96LW9 406 aaPredicted RBP14.1□□□□□ -0.15
NIP7-201ENST00000254940 ZNF112Q9UJU3 913 aa14.1□□□□□ -0.15
NIP7-201ENST00000254940 HPS5Q9UPZ3 1129 aa14.1□□□□□ -0.15
NIP7-201ENST00000254940 MTMR6Q9Y217 621 aa14.1□□□□□ -0.15
NIP7-201ENST00000254940 PASKQ96RG2 1323 aa14.1□□□□□ -0.15
NIP7-201ENST00000254940 CCDC69A6NI79 296 aa14.1□□□□□ -0.15
NIP7-201ENST00000254940 GOLGA8BA8MQT2 603 aa14.1□□□□□ -0.15
NIP7-201ENST00000254940 USP17L5A8MUK1 530 aa14.1□□□□□ -0.15
NIP7-201ENST00000254940 GOLGA6L22H0YM25 854 aa14.1□□□□□ -0.15
NIP7-201ENST00000254940 ECM2O94769 699 aaPredicted RBP14.1□□□□□ -0.15
NIP7-201ENST00000254940 ZSCAN22P10073 491 aaPredicted RBP14.1□□□□□ -0.15
NIP7-201ENST00000254940 HMGCS2P54868 508 aa14.1□□□□□ -0.15
NIP7-201ENST00000254940 SNAP25P60880 206 aa14.1□□□□□ -0.15
NIP7-201ENST00000254940 GUCY1B3Q02153 619 aa14.1□□□□□ -0.15
NIP7-201ENST00000254940 LARP1BQ659C4 914 aaKnown RBP14.1□□□□□ -0.15
NIP7-201ENST00000254940 OPTNQ96CV9 577 aa14.1□□□□□ -0.15
NIP7-201ENST00000254940 GPCPD1Q9NPB8 672 aa14.1□□□□□ -0.15
NIP7-201ENST00000254940 IGKV6D-41A0A0C4DH26 115 aa14.09□□□□□ -0.15
NIP7-201ENST00000254940 IRF6O14896 467 aa14.09□□□□□ -0.15
NIP7-201ENST00000254940 ASNSP08243 561 aa14.09□□□□□ -0.15
NIP7-201ENST00000254940 DNM1Q05193 864 aaKnown RBP14.09□□□□□ -0.15
NIP7-201ENST00000254940 USP17L2Q6R6M4 530 aa14.09□□□□□ -0.15
NIP7-201ENST00000254940 KCTD1Q719H9 257 aa14.09□□□□□ -0.15
NIP7-201ENST00000254940 GTF3C6Q969F1 213 aa14.09□□□□□ -0.15
NIP7-201ENST00000254940 SLC10A4Q96EP9 437 aa14.09□□□□□ -0.15
NIP7-201ENST00000254940 CCDC17Q96LX7 622 aa14.09□□□□□ -0.15
NIP7-201ENST00000254940 PANK2Q9BZ23 570 aa14.09□□□□□ -0.15
NIP7-201ENST00000254940 KAT14Q9H8E8 782 aa14.09□□□□□ -0.15
NIP7-201ENST00000254940 PEX10O60683 326 aa14.09□□□□□ -0.15
NIP7-201ENST00000254940 TTLL1O95922 423 aa14.09□□□□□ -0.15
NIP7-201ENST00000254940 SART3Q15020 963 aaKnown RBP14.09□□□□□ -0.15
NIP7-201ENST00000254940 ANKRD1Q15327 319 aa14.09□□□□□ -0.15
NIP7-201ENST00000254940 ANKRD13AQ8IZ07 590 aa14.09□□□□□ -0.15
NIP7-201ENST00000254940 PNMA1Q8ND90 353 aa14.09□□□□□ -0.15
NIP7-201ENST00000254940 RBM46Q8TBY0 533 aaKnown RBP14.09□□□□□ -0.15
NIP7-201ENST00000254940 HOOK2Q96ED9 719 aa14.09□□□□□ -0.15
NIP7-201ENST00000254940 AIFM3Q96NN9 605 aa14.09□□□□□ -0.15
NIP7-201ENST00000254940 WDR33Q9C0J8 1336 aaKnown RBP14.09□□□□□ -0.15
NIP7-201ENST00000254940 TCHHQ07283 1943 aa14.08□□□□□ -0.16
NIP7-201ENST00000254940 F13A1P00488 732 aa14.08□□□□□ -0.16
NIP7-201ENST00000254940 HMGB1P09429 215 aaKnown RBP14.08□□□□□ -0.16
NIP7-201ENST00000254940 TAL1P17542 331 aaPredicted RBP14.08□□□□□ -0.16
NIP7-201ENST00000254940 SLC16A2P36021 539 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms