RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 PODNQ7Z5L7 613 aa11.46□□□□□ -0.57
TTC1-201ENST00000231238 CCDC83Q8IWF9 413 aa11.46□□□□□ -0.57
TTC1-201ENST00000231238 STK11IPQ8N1F8 1099 aa11.46□□□□□ -0.57
TTC1-201ENST00000231238 BRF1Q92994 677 aa11.46□□□□□ -0.57
TTC1-201ENST00000231238 CHMP4CQ96CF2 233 aa11.46□□□□□ -0.57
TTC1-201ENST00000231238 INTS4Q96HW7 963 aaKnown RBP11.46□□□□□ -0.57
TTC1-201ENST00000231238 RIOK1Q9BRS2 568 aaKnown RBP11.46□□□□□ -0.57
TTC1-201ENST00000231238 KRT23Q9C075 422 aa11.46□□□□□ -0.57
TTC1-201ENST00000231238 EPB41L4AQ9HCS5 686 aaPredicted RBP11.46□□□□□ -0.57
TTC1-201ENST00000231238 DUOX1Q9NRD9 1551 aa11.46□□□□□ -0.57
TTC1-201ENST00000231238 PIM2Q9P1W9 311 aa11.46□□□□□ -0.57
TTC1-201ENST00000231238 MYO5AQ9Y4I1 1855 aaKnown RBP11.46□□□□□ -0.57
TTC1-201ENST00000231238 CACNA1SQ13698 1873 aa11.46□□□□□ -0.58
TTC1-201ENST00000231238 MROH7-TTC4A0A0A0MT08 1334 aa11.45□□□□□ -0.58
TTC1-201ENST00000231238 FOXP2O15409 715 aa11.45□□□□□ -0.58
TTC1-201ENST00000231238 NR3C2P08235 984 aa11.45□□□□□ -0.58
TTC1-201ENST00000231238 PTK2Q05397 1052 aa11.45□□□□□ -0.58
TTC1-201ENST00000231238 CUL4AQ13619 759 aa11.45□□□□□ -0.58
TTC1-201ENST00000231238 SART3Q15020 963 aaKnown RBP11.45□□□□□ -0.58
TTC1-201ENST00000231238 AOC3Q16853 763 aa11.45□□□□□ -0.58
TTC1-201ENST00000231238 GIMAP6Q6P9H5 292 aa11.45□□□□□ -0.58
TTC1-201ENST00000231238 CHST3Q7LGC8 479 aa11.45□□□□□ -0.58
TTC1-201ENST00000231238 ALDH8A1Q9H2A2 487 aaPredicted RBP11.45□□□□□ -0.58
TTC1-201ENST00000231238 ATP8A2Q9NTI2 1148 aa11.45□□□□□ -0.58
TTC1-201ENST00000231238 GPSM3Q9Y4H4 160 aa11.45□□□□□ -0.58
TTC1-201ENST00000231238 ERICH2A1L162 156 aa11.44□□□□□ -0.58
TTC1-201ENST00000231238 SOCS7O14512 581 aa11.44□□□□□ -0.58
TTC1-201ENST00000231238 ECE2O60344 883 aa11.44□□□□□ -0.58
TTC1-201ENST00000231238 BTDP43251 543 aa11.44□□□□□ -0.58
TTC1-201ENST00000231238 PPARAQ07869 468 aa11.44□□□□□ -0.58
TTC1-201ENST00000231238 DALRD3Q5D0E6 543 aaKnown RBP11.44□□□□□ -0.58
TTC1-201ENST00000231238 AKNAD1Q5T1N1 836 aa11.44□□□□□ -0.58
TTC1-201ENST00000231238 NFXL1Q6ZNB6 911 aa11.44□□□□□ -0.58
TTC1-201ENST00000231238 TBC1D10CQ8IV04 446 aa11.44□□□□□ -0.58
TTC1-201ENST00000231238 LARGE2Q8N3Y3 721 aa11.44□□□□□ -0.58
TTC1-201ENST00000231238 ADAM32Q8TC27 787 aa11.44□□□□□ -0.58
TTC1-201ENST00000231238 KLF16Q9BXK1 252 aaPredicted RBP11.44□□□□□ -0.58
TTC1-201ENST00000231238 TTF2Q9UNY4 1162 aaKnown RBP11.44□□□□□ -0.58
TTC1-201ENST00000231238 SUGT1Q9Y2Z0 365 aa11.44□□□□□ -0.58
TTC1-201ENST00000231238 B4E1Z4 1266 aa11.44□□□□□ -0.58
TTC1-201ENST00000231238 RBM5P52756 815 aaKnown RBP eCLIP11.44□□□□□ -0.58
TTC1-201ENST00000231238 TOB2Q14106 344 aaPredicted RBP11.44□□□□□ -0.58
TTC1-201ENST00000231238 ME3Q16798 604 aa11.44□□□□□ -0.58
TTC1-201ENST00000231238 ZBTB33Q86T24 672 aa11.44□□□□□ -0.58
TTC1-201ENST00000231238 TEX11Q8IYF3 940 aa11.44□□□□□ -0.58
TTC1-201ENST00000231238 NECAB1Q8N987 351 aa11.44□□□□□ -0.58
TTC1-201ENST00000231238 ZNF384Q8TF68 577 aa11.44□□□□□ -0.58
TTC1-201ENST00000231238 GBP4Q96PP9 640 aa11.44□□□□□ -0.58
TTC1-201ENST00000231238 MCM9Q9NXL9 1143 aa11.44□□□□□ -0.58
TTC1-201ENST00000231238 ARPP21Q9UBL0 812 aaPredicted RBP11.44□□□□□ -0.58
TTC1-201ENST00000231238 TPCN1Q9ULQ1 816 aa11.44□□□□□ -0.58
TTC1-201ENST00000231238 MAP4K5Q9Y4K4 846 aa11.44□□□□□ -0.58
TTC1-201ENST00000231238 MAST2Q6P0Q8 1798 aa11.43□□□□□ -0.58
TTC1-201ENST00000231238 USP17L3A6NCW0 530 aa11.43□□□□□ -0.58
TTC1-201ENST00000231238 USP17L4A6NCW7 530 aa11.43□□□□□ -0.58
TTC1-201ENST00000231238 USP17L12C9JPN9 530 aa11.43□□□□□ -0.58
TTC1-201ENST00000231238 USP17L21D6R901 530 aa11.43□□□□□ -0.58
TTC1-201ENST00000231238 POLR3DP05423 398 aaPredicted RBP11.43□□□□□ -0.58
TTC1-201ENST00000231238 APOBRQ0VD83 1088 aa11.43□□□□□ -0.58
TTC1-201ENST00000231238 KIAA2012Q0VF49 1180 aa11.43□□□□□ -0.58
TTC1-201ENST00000231238 GRIK5Q16478 980 aa11.43□□□□□ -0.58
TTC1-201ENST00000231238 SYNE3Q6ZMZ3 975 aa11.43□□□□□ -0.58
TTC1-201ENST00000231238 USP17L1Q7RTZ2 530 aa11.43□□□□□ -0.58
TTC1-201ENST00000231238 PNMA1Q8ND90 353 aa11.43□□□□□ -0.58
TTC1-201ENST00000231238 SH3RF3Q8TEJ3 882 aaPredicted RBP11.43□□□□□ -0.58
TTC1-201ENST00000231238 TGFBRAP1Q8WUH2 860 aa11.43□□□□□ -0.58
TTC1-201ENST00000231238 C7orf43Q8WVR3 580 aa11.43□□□□□ -0.58
TTC1-201ENST00000231238 ESR2Q92731 530 aa11.43□□□□□ -0.58
TTC1-201ENST00000231238 UBAC1Q9BSL1 405 aa11.43□□□□□ -0.58
TTC1-201ENST00000231238 RTFDC1Q9BY42 306 aaPredicted RBP11.43□□□□□ -0.58
TTC1-201ENST00000231238 CCDC88AQ3V6T2 1871 aa11.43□□□□□ -0.58
TTC1-201ENST00000231238 SLX4Q8IY92 1834 aa11.43□□□□□ -0.58
TTC1-201ENST00000231238 WDR19Q8NEZ3 1342 aa11.42□□□□□ -0.58
TTC1-201ENST00000231238 GOLGA6L22H0YM25 854 aa11.42□□□□□ -0.58
TTC1-201ENST00000231238 IFIT3O14879 490 aaKnown RBP11.42□□□□□ -0.58
TTC1-201ENST00000231238 LARGE1O95461 756 aa11.42□□□□□ -0.58
TTC1-201ENST00000231238 EXOSC10Q01780 885 aaKnown RBP11.42□□□□□ -0.58
TTC1-201ENST00000231238 PDE4BQ07343 736 aa11.42□□□□□ -0.58
TTC1-201ENST00000231238 NR5A1Q13285 461 aa11.42□□□□□ -0.58
TTC1-201ENST00000231238 NFKBIBQ15653 356 aa11.42□□□□□ -0.58
TTC1-201ENST00000231238 TMEM67Q5HYA8 995 aa11.42□□□□□ -0.58
TTC1-201ENST00000231238 STRIP1Q5VSL9 837 aa11.42□□□□□ -0.58
TTC1-201ENST00000231238 ZNF787Q6DD87 383 aa11.42□□□□□ -0.58
TTC1-201ENST00000231238 VASH1Q7L8A9 365 aaPredicted RBP11.42□□□□□ -0.58
TTC1-201ENST00000231238 MB21D2Q8IYB1 491 aaPredicted RBP11.42□□□□□ -0.58
TTC1-201ENST00000231238 STAG1Q8WVM7 1258 aa11.42□□□□□ -0.58
TTC1-201ENST00000231238 TEKT1Q969V4 418 aa11.42□□□□□ -0.58
TTC1-201ENST00000231238 TMEM87BQ96K49 555 aa11.42□□□□□ -0.58
TTC1-201ENST00000231238 DCP1AQ9NPI6 582 aaPredicted RBP11.42□□□□□ -0.58
TTC1-201ENST00000231238 BCS1LQ9Y276 419 aa11.42□□□□□ -0.58
TTC1-201ENST00000231238 KIF3AQ9Y496 699 aa11.42□□□□□ -0.58
TTC1-201ENST00000231238 NEDD4P46934 1319 aa11.41□□□□□ -0.58
TTC1-201ENST00000231238 LTBP1Q14766 1721 aa11.41□□□□□ -0.58
TTC1-201ENST00000231238 KLF18A0A0U1RQI7 1052 aa11.41□□□□□ -0.58
TTC1-201ENST00000231238 CCDC69A6NI79 296 aa11.41□□□□□ -0.58
TTC1-201ENST00000231238 GOLGA8BA8MQT2 603 aa11.41□□□□□ -0.58
TTC1-201ENST00000231238 CPLX1O14810 134 aa11.41□□□□□ -0.58
TTC1-201ENST00000231238 DHX16O60231 1041 aaKnown RBP11.41□□□□□ -0.58
TTC1-201ENST00000231238 RANBP6O60518 1105 aaKnown RBP11.41□□□□□ -0.58
TTC1-201ENST00000231238 GJB2P29033 226 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms