RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 REXO2Q9Y3B8 237 aaKnown RBP15.8■□□□□ 0.12
SCNN1A-201ENST00000228916 N4BP3O15049 544 aa15.8■□□□□ 0.12
SCNN1A-201ENST00000228916 MCM3P25205 808 aa15.8■□□□□ 0.12
SCNN1A-201ENST00000228916 CDC25AP30304 524 aa15.8■□□□□ 0.12
SCNN1A-201ENST00000228916 RCAN1P53805 252 aa15.8■□□□□ 0.12
SCNN1A-201ENST00000228916 ZBTB38Q8NAP3 1195 aaPredicted RBP15.8■□□□□ 0.12
SCNN1A-201ENST00000228916 PPM1EQ8WY54 764 aa15.8■□□□□ 0.12
SCNN1A-201ENST00000228916 SYMPKQ92797 1274 aaKnown RBP15.8■□□□□ 0.12
SCNN1A-201ENST00000228916 HPCAL4Q9UM19 191 aa15.8■□□□□ 0.12
SCNN1A-201ENST00000228916 CCDC196A0A1B0GTZ2 297 aa15.79■□□□□ 0.12
SCNN1A-201ENST00000228916 ITGA6P23229 1130 aa15.79■□□□□ 0.12
SCNN1A-201ENST00000228916 VGLL2Q8N8G2 317 aa15.79■□□□□ 0.12
SCNN1A-201ENST00000228916 NAPBQ9H115 298 aa15.79■□□□□ 0.12
SCNN1A-201ENST00000228916 CTNND2Q9UQB3 1225 aa15.79■□□□□ 0.12
SCNN1A-201ENST00000228916 TNS2Q63HR2 1409 aa15.79■□□□□ 0.12
SCNN1A-201ENST00000228916 COPB1P53618 953 aaKnown RBP15.79■□□□□ 0.12
SCNN1A-201ENST00000228916 SPAG1Q07617 926 aa15.79■□□□□ 0.12
SCNN1A-201ENST00000228916 MAP9Q49MG5 647 aa15.79■□□□□ 0.12
SCNN1A-201ENST00000228916 NUP88Q99567 741 aaPredicted RBP15.79■□□□□ 0.12
SCNN1A-201ENST00000228916 TARSL2A2RTX5 802 aaKnown RBP15.79■□□□□ 0.12
SCNN1A-201ENST00000228916 ARID4AP29374 1257 aaPredicted RBP15.79■□□□□ 0.12
SCNN1A-201ENST00000228916 KRT9P35527 623 aa15.79■□□□□ 0.12
SCNN1A-201ENST00000228916 FERMT2Q96AC1 680 aa15.79■□□□□ 0.12
SCNN1A-201ENST00000228916 SHISA4Q96DD7 197 aa15.79■□□□□ 0.12
SCNN1A-201ENST00000228916 MTA3Q9BTC8 594 aa15.79■□□□□ 0.12
SCNN1A-201ENST00000228916 EPN1Q9Y6I3 576 aaPredicted RBP15.79■□□□□ 0.12
SCNN1A-201ENST00000228916 NDUFA10O95299 355 aa15.78■□□□□ 0.12
SCNN1A-201ENST00000228916 CPP00450 1065 aa15.78■□□□□ 0.12
SCNN1A-201ENST00000228916 WTAPQ15007 396 aa15.78■□□□□ 0.12
SCNN1A-201ENST00000228916 TOM1L2Q6ZVM7 507 aa15.78■□□□□ 0.12
SCNN1A-201ENST00000228916 CMTR1Q8N1G2 835 aaKnown RBP15.78■□□□□ 0.12
SCNN1A-201ENST00000228916 CCDC82Q8N4S0 544 aa15.78■□□□□ 0.12
SCNN1A-201ENST00000228916 TTLL11Q8NHH1 800 aa15.78■□□□□ 0.12
SCNN1A-201ENST00000228916 YY1AP1Q9H869 796 aa15.78■□□□□ 0.12
SCNN1A-201ENST00000228916 RWDD2AQ9UIY3 292 aa15.78■□□□□ 0.12
SCNN1A-201ENST00000228916 FAM205CA6NFA0 338 aa15.78■□□□□ 0.12
SCNN1A-201ENST00000228916 NKX1-1Q15270 411 aaPredicted RBP15.78■□□□□ 0.12
SCNN1A-201ENST00000228916 MFSD6Q6ZSS7 791 aa15.78■□□□□ 0.12
SCNN1A-201ENST00000228916 COG1Q8WTW3 980 aa15.78■□□□□ 0.12
SCNN1A-201ENST00000228916 STAG1Q8WVM7 1258 aa15.78■□□□□ 0.12
SCNN1A-201ENST00000228916 CHP1Q99653 195 aa15.78■□□□□ 0.12
SCNN1A-201ENST00000228916 PHKA1P46020 1223 aa15.77■□□□□ 0.12
SCNN1A-201ENST00000228916 AKAP17AQ02040 695 aaKnown RBP15.77■□□□□ 0.12
SCNN1A-201ENST00000228916 SART3Q15020 963 aaKnown RBP15.77■□□□□ 0.12
SCNN1A-201ENST00000228916 PAPD7Q5XG87 772 aaKnown RBP15.77■□□□□ 0.12
SCNN1A-201ENST00000228916 FANCBQ8NB91 859 aa15.77■□□□□ 0.12
SCNN1A-201ENST00000228916 VPS16Q9H269 839 aa15.77■□□□□ 0.12
SCNN1A-201ENST00000228916 HAUS4Q9H6D7 363 aa15.77■□□□□ 0.12
SCNN1A-201ENST00000228916 TRIM10Q9UDY6 481 aa15.77■□□□□ 0.12
SCNN1A-201ENST00000228916 SPATA31A3Q5VYP0 1347 aa15.77■□□□□ 0.12
SCNN1A-201ENST00000228916 BMP15O95972 392 aa15.77■□□□□ 0.11
SCNN1A-201ENST00000228916 GPTP24298 496 aa15.77■□□□□ 0.11
SCNN1A-201ENST00000228916 TCP11X2Q5H9J9 407 aa15.77■□□□□ 0.11
SCNN1A-201ENST00000228916 EFCAB13Q8IY85 973 aa15.77■□□□□ 0.11
SCNN1A-201ENST00000228916 TMTC2Q8N394 836 aa15.77■□□□□ 0.11
SCNN1A-201ENST00000228916 GUCA1BQ9UMX6 200 aa15.77■□□□□ 0.11
SCNN1A-201ENST00000228916 JRKLQ9Y4A0 524 aa15.77■□□□□ 0.11
SCNN1A-201ENST00000228916 XDHP47989 1333 aa15.77■□□□□ 0.11
SCNN1A-201ENST00000228916 CDHR2Q9BYE9 1310 aa15.77■□□□□ 0.11
SCNN1A-201ENST00000228916 MYH6P13533 1939 aa15.77■□□□□ 0.11
SCNN1A-201ENST00000228916 SHOX2O60902 331 aaPredicted RBP15.77■□□□□ 0.11
SCNN1A-201ENST00000228916 HLFQ16534 295 aa15.77■□□□□ 0.11
SCNN1A-201ENST00000228916 EARS2Q5JPH6 523 aaKnown RBP15.77■□□□□ 0.11
SCNN1A-201ENST00000228916 RPGRIP1Q96KN7 1286 aa15.77■□□□□ 0.11
SCNN1A-201ENST00000228916 MMS19Q96T76 1030 aa15.77■□□□□ 0.11
SCNN1A-201ENST00000228916 ZKSCAN3Q9BRR0 538 aa15.77■□□□□ 0.11
SCNN1A-201ENST00000228916 RNF26Q9BY78 433 aaPredicted RBP15.77■□□□□ 0.11
SCNN1A-201ENST00000228916 BRMS1Q9HCU9 246 aa15.77■□□□□ 0.11
SCNN1A-201ENST00000228916 CNNM1Q9NRU3 951 aa15.77■□□□□ 0.11
SCNN1A-201ENST00000228916 TAB2Q9NYJ8 693 aa15.77■□□□□ 0.11
SCNN1A-201ENST00000228916 GSG1L2A8MUP6 293 aa15.76■□□□□ 0.11
SCNN1A-201ENST00000228916 DNAJC21Q5F1R6 531 aaKnown RBP15.76■□□□□ 0.11
SCNN1A-201ENST00000228916 SAR1BQ9Y6B6 198 aa15.76■□□□□ 0.11
SCNN1A-201ENST00000228916 SHANK3Q9BYB0 1731 aa15.76■□□□□ 0.11
SCNN1A-201ENST00000228916 MBD4O95243 580 aa15.76■□□□□ 0.11
SCNN1A-201ENST00000228916 UQCRFS1P1P0C7P4 283 aa15.76■□□□□ 0.11
SCNN1A-201ENST00000228916 GTF2A1P52655 376 aaPredicted RBP15.76■□□□□ 0.11
SCNN1A-201ENST00000228916 E2F4Q16254 413 aa15.76■□□□□ 0.11
SCNN1A-201ENST00000228916 ZNF662Q6ZS27 426 aa15.76■□□□□ 0.11
SCNN1A-201ENST00000228916 ZNF654Q8IZM8 581 aa15.76■□□□□ 0.11
SCNN1A-201ENST00000228916 HDAC6Q9UBN7 1215 aa15.76■□□□□ 0.11
SCNN1A-201ENST00000228916 KCNJ18B7U540 433 aa15.75■□□□□ 0.11
SCNN1A-201ENST00000228916 COBLO75128 1261 aa15.75■□□□□ 0.11
SCNN1A-201ENST00000228916 PAK1Q13153 545 aa15.75■□□□□ 0.11
SCNN1A-201ENST00000228916 STIM1Q13586 685 aa15.75■□□□□ 0.11
SCNN1A-201ENST00000228916 KCNJ12Q14500 433 aa15.75■□□□□ 0.11
SCNN1A-201ENST00000228916 KIF6Q6ZMV9 814 aa15.75■□□□□ 0.11
SCNN1A-201ENST00000228916 ANKRD20A12PQ8NF67 263 aa15.75■□□□□ 0.11
SCNN1A-201ENST00000228916 PHF20Q9BVI0 1012 aa15.75■□□□□ 0.11
SCNN1A-201ENST00000228916 WNT7AO00755 349 aa15.75■□□□□ 0.11
SCNN1A-201ENST00000228916 ENC1O14682 589 aa15.75■□□□□ 0.11
SCNN1A-201ENST00000228916 PDE8BO95263 885 aa15.75■□□□□ 0.11
SCNN1A-201ENST00000228916 ATP1A1P05023 1023 aaKnown RBP15.75■□□□□ 0.11
SCNN1A-201ENST00000228916 RRAGBQ5VZM2 374 aa15.75■□□□□ 0.11
SCNN1A-201ENST00000228916 PLEKHA4Q9H4M7 779 aa15.75■□□□□ 0.11
SCNN1A-201ENST00000228916 ERICH2A1L162 156 aa15.74■□□□□ 0.11
SCNN1A-201ENST00000228916 ANKRD65E5RJM6 399 aa15.74■□□□□ 0.11
SCNN1A-201ENST00000228916 KRT2P35908 639 aa15.74■□□□□ 0.11
SCNN1A-201ENST00000228916 HERVK_113P62684 666 aa15.74■□□□□ 0.11
SCNN1A-201ENST00000228916 IRX3P78415 501 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms