RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 RASGRP2Q7LDG7 609 aa22.76■■□□□ 1.23
TNFRSF1A-201ENST00000162749 METTL16Q86W50 562 aaKnown RBP22.76■■□□□ 1.23
TNFRSF1A-201ENST00000162749 CLEC10AQ8IUN9 316 aa22.76■■□□□ 1.23
TNFRSF1A-201ENST00000162749 TCP10L2B9ZVM9 353 aa22.76■■□□□ 1.23
TNFRSF1A-201ENST00000162749 U2AF2P26368 475 aaKnown RBP eCLIP22.76■■□□□ 1.23
TNFRSF1A-201ENST00000162749 FOXP4Q8IVH2 680 aaPredicted RBP22.76■■□□□ 1.23
TNFRSF1A-201ENST00000162749 SHISA4Q96DD7 197 aa22.76■■□□□ 1.23
TNFRSF1A-201ENST00000162749 ZNF396Q96N95 335 aaPredicted RBP22.76■■□□□ 1.23
TNFRSF1A-201ENST00000162749 RRAGDQ9NQL2 400 aaPredicted RBP22.76■■□□□ 1.23
TNFRSF1A-201ENST00000162749 KCNJ14Q9UNX9 436 aa22.76■■□□□ 1.23
TNFRSF1A-201ENST00000162749 MTMR7Q9Y216 660 aa22.76■■□□□ 1.23
TNFRSF1A-201ENST00000162749 SHTN1A0MZ66 631 aa22.75■■□□□ 1.23
TNFRSF1A-201ENST00000162749 TPRNQ4KMQ1 711 aa22.75■■□□□ 1.23
TNFRSF1A-201ENST00000162749 ZBED3Q96IU2 234 aaPredicted RBP22.75■■□□□ 1.23
TNFRSF1A-201ENST00000162749 CCDC17Q96LX7 622 aa22.75■■□□□ 1.23
TNFRSF1A-201ENST00000162749 FZD9O00144 591 aa22.74■■□□□ 1.23
TNFRSF1A-201ENST00000162749 TATDN1Q6P1N9 297 aa22.74■■□□□ 1.23
TNFRSF1A-201ENST00000162749 CSRNP1Q96S65 589 aa22.74■■□□□ 1.23
TNFRSF1A-201ENST00000162749 FHDC1Q9C0D6 1143 aaPredicted RBP22.74■■□□□ 1.23
TNFRSF1A-201ENST00000162749 PALM3A6NDB9 673 aaPredicted RBP22.74■■□□□ 1.23
TNFRSF1A-201ENST00000162749 WNT10BO00744 389 aa22.74■■□□□ 1.23
TNFRSF1A-201ENST00000162749 EIF6P56537 245 aaKnown RBP22.74■■□□□ 1.23
TNFRSF1A-201ENST00000162749 MYOZ2Q9NPC6 264 aa22.74■■□□□ 1.23
TNFRSF1A-201ENST00000162749 CNTNAP1P78357 1384 aa22.74■■□□□ 1.23
TNFRSF1A-201ENST00000162749 MPHOSPH10O00566 681 aaKnown RBP22.73■■□□□ 1.23
TNFRSF1A-201ENST00000162749 TTLL1O95922 423 aa22.73■■□□□ 1.23
TNFRSF1A-201ENST00000162749 NASPP49321 788 aaPredicted RBP22.73■■□□□ 1.23
TNFRSF1A-201ENST00000162749 GNAQP50148 359 aa22.73■■□□□ 1.23
TNFRSF1A-201ENST00000162749 VPS54Q9P1Q0 977 aa22.73■■□□□ 1.23
TNFRSF1A-201ENST00000162749 RCOR1Q9UKL0 485 aa22.73■■□□□ 1.23
TNFRSF1A-201ENST00000162749 RPS12P25398 132 aaKnown RBP22.73■■□□□ 1.23
TNFRSF1A-201ENST00000162749 GNL2Q13823 731 aaKnown RBP22.73■■□□□ 1.23
TNFRSF1A-201ENST00000162749 SLC35G1Q2M3R5 365 aa22.73■■□□□ 1.23
TNFRSF1A-201ENST00000162749 NBPF9Q3BBW0 867 aa22.73■■□□□ 1.23
TNFRSF1A-201ENST00000162749 CERKLQ49MI3 558 aaPredicted RBP22.73■■□□□ 1.23
TNFRSF1A-201ENST00000162749 FKBP1CQ5VVH2 108 aa22.73■■□□□ 1.23
TNFRSF1A-201ENST00000162749 DIS3L2Q8IYB7 885 aaKnown RBP22.73■■□□□ 1.23
TNFRSF1A-201ENST00000162749 TRIM34Q9BYJ4 488 aa22.73■■□□□ 1.23
TNFRSF1A-201ENST00000162749 BTBD18B2RXH4 712 aa22.72■■□□□ 1.23
TNFRSF1A-201ENST00000162749 FAM151AQ8WW52 585 aa22.72■■□□□ 1.23
TNFRSF1A-201ENST00000162749 PGBD1Q96JS3 809 aa22.72■■□□□ 1.23
TNFRSF1A-201ENST00000162749 RBSNQ9H1K0 784 aa22.72■■□□□ 1.23
TNFRSF1A-201ENST00000162749 VEZTQ9HBM0 779 aa22.72■■□□□ 1.23
TNFRSF1A-201ENST00000162749 CYTH3O43739 400 aa22.72■■□□□ 1.23
TNFRSF1A-201ENST00000162749 GOLGA8HP0CJ92 632 aa22.72■■□□□ 1.23
TNFRSF1A-201ENST00000162749 XBP1P17861 261 aa22.72■■□□□ 1.23
TNFRSF1A-201ENST00000162749 SAFBQ15424 915 aaKnown RBP eCLIP22.72■■□□□ 1.23
TNFRSF1A-201ENST00000162749 SHROOM1Q2M3G4 852 aaPredicted RBP22.72■■□□□ 1.23
TNFRSF1A-201ENST00000162749 LRRC47Q8N1G4 583 aaKnown RBP22.72■■□□□ 1.23
TNFRSF1A-201ENST00000162749 PARP1P09874 1014 aaKnown RBP22.71■■□□□ 1.23
TNFRSF1A-201ENST00000162749 SCG2P13521 617 aa22.71■■□□□ 1.23
TNFRSF1A-201ENST00000162749 ZNF280AP59817 542 aaPredicted RBP22.71■■□□□ 1.23
TNFRSF1A-201ENST00000162749 PFKFB3Q16875 520 aaPredicted RBP22.71■■□□□ 1.23
TNFRSF1A-201ENST00000162749 USP17L2Q6R6M4 530 aa22.71■■□□□ 1.23
TNFRSF1A-201ENST00000162749 POLR3EQ9NVU0 708 aa22.71■■□□□ 1.23
TNFRSF1A-201ENST00000162749 RTEL1Q9NZ71 1219 aa22.71■■□□□ 1.23
TNFRSF1A-201ENST00000162749 CLIP2Q9UDT6 1046 aa22.71■■□□□ 1.23
TNFRSF1A-201ENST00000162749 SYCE3A1L190 88 aa22.7■■□□□ 1.23
TNFRSF1A-201ENST00000162749 KLRF2D3W0D1 207 aa22.7■■□□□ 1.23
TNFRSF1A-201ENST00000162749 MYO1BO43795 1136 aa22.7■■□□□ 1.23
TNFRSF1A-201ENST00000162749 PDHBP11177 359 aa22.7■■□□□ 1.23
TNFRSF1A-201ENST00000162749 VEGFAP15692 232 aaPredicted RBP22.7■■□□□ 1.23
TNFRSF1A-201ENST00000162749 NOSTRINQ8IVI9 506 aa22.7■■□□□ 1.23
TNFRSF1A-201ENST00000162749 PIBF1Q8WXW3 757 aa22.7■■□□□ 1.23
TNFRSF1A-201ENST00000162749 PHF20Q9BVI0 1012 aa22.7■■□□□ 1.23
TNFRSF1A-201ENST00000162749 FOXP1Q9H334 677 aaPredicted RBP22.7■■□□□ 1.23
TNFRSF1A-201ENST00000162749 EGFRP00533 1210 aa22.7■■□□□ 1.22
TNFRSF1A-201ENST00000162749 MMP14P50281 582 aa22.7■■□□□ 1.22
TNFRSF1A-201ENST00000162749 CLIC4Q9Y696 253 aa22.7■■□□□ 1.22
TNFRSF1A-201ENST00000162749 USP17L5A8MUK1 530 aa22.69■■□□□ 1.22
TNFRSF1A-201ENST00000162749 NR5A1Q13285 461 aa22.69■■□□□ 1.22
TNFRSF1A-201ENST00000162749 LRSAM1Q6UWE0 723 aa22.69■■□□□ 1.22
TNFRSF1A-201ENST00000162749 LZTS2Q9BRK4 669 aa22.69■■□□□ 1.22
TNFRSF1A-201ENST00000162749 HERC5Q9UII4 1024 aaKnown RBP22.69■■□□□ 1.22
TNFRSF1A-201ENST00000162749 GOLGA6L4A6NEF3 574 aa22.69■■□□□ 1.22
TNFRSF1A-201ENST00000162749 SNHG28P0DPA3 235 aa22.69■■□□□ 1.22
TNFRSF1A-201ENST00000162749 GMPSP49915 693 aaPredicted RBP22.69■■□□□ 1.22
TNFRSF1A-201ENST00000162749 FAM83AQ86UY5 434 aa22.69■■□□□ 1.22
TNFRSF1A-201ENST00000162749 LINC00301Q8NCQ3 95 aa22.69■■□□□ 1.22
TNFRSF1A-201ENST00000162749 OXER1Q8TDS5 423 aa22.69■■□□□ 1.22
TNFRSF1A-201ENST00000162749 DPF2Q92785 391 aa22.69■■□□□ 1.22
TNFRSF1A-201ENST00000162749 SYAP1Q96A49 352 aaPredicted RBP22.69■■□□□ 1.22
TNFRSF1A-201ENST00000162749 GJA3Q9Y6H8 435 aa22.69■■□□□ 1.22
TNFRSF1A-201ENST00000162749 SPZ1Q9BXG8 430 aa22.68■■□□□ 1.22
TNFRSF1A-201ENST00000162749 TMEM39BQ9GZU3 492 aa22.68■■□□□ 1.22
TNFRSF1A-201ENST00000162749 CPVLQ9H3G5 476 aa22.68■■□□□ 1.22
TNFRSF1A-201ENST00000162749 ZNF541Q9H0D2 1346 aa22.68■■□□□ 1.22
TNFRSF1A-201ENST00000162749 GDF11O95390 407 aa22.67■■□□□ 1.22
TNFRSF1A-201ENST00000162749 NPY5RQ15761 445 aa22.67■■□□□ 1.22
TNFRSF1A-201ENST00000162749 CDAN1Q8IWY9 1227 aa22.67■■□□□ 1.22
TNFRSF1A-201ENST00000162749 MICALL2Q8IY33 904 aa22.67■■□□□ 1.22
TNFRSF1A-201ENST00000162749 YEATS4O95619 227 aa22.67■■□□□ 1.22
TNFRSF1A-201ENST00000162749 PPP4R3BQ5MIZ7 849 aa22.67■■□□□ 1.22
TNFRSF1A-201ENST00000162749 ANO1Q5XXA6 986 aa22.67■■□□□ 1.22
TNFRSF1A-201ENST00000162749 ARHGAP27Q6ZUM4 889 aa22.67■■□□□ 1.22
TNFRSF1A-201ENST00000162749 TMEM179Q6ZVK1 233 aa22.67■■□□□ 1.22
TNFRSF1A-201ENST00000162749 PPP1R9BQ96SB3 815 aa22.67■■□□□ 1.22
TNFRSF1A-201ENST00000162749 KANSL2Q9H9L4 492 aa22.67■■□□□ 1.22
TNFRSF1A-201ENST00000162749 ATP2B2Q01814 1243 aa22.66■■□□□ 1.22
TNFRSF1A-201ENST00000162749 RRP1BQ14684 758 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms