RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Ces3aQ63880 571 aa18.49■□□□□ 0.55
Trim8-201ENSMUST00000026008 Krt40Q6IFX3 439 aa18.49■□□□□ 0.55
Trim8-201ENSMUST00000026008 TxlnaQ6PAM1 554 aaKnown RBP18.49■□□□□ 0.55
Trim8-201ENSMUST00000026008 Map3k11Q80XI6 850 aa18.49■□□□□ 0.55
Trim8-201ENSMUST00000026008 Ankrd23Q812A3 306 aa18.49■□□□□ 0.55
Trim8-201ENSMUST00000026008 NelfbQ8C4Y3 580 aa18.49■□□□□ 0.55
Trim8-201ENSMUST00000026008 Ces3bQ8VCU1 571 aa18.49■□□□□ 0.55
Trim8-201ENSMUST00000026008 Ankrd63A2ARS0 390 aa18.48■□□□□ 0.55
Trim8-201ENSMUST00000026008 Pola2P33611 600 aa18.48■□□□□ 0.55
Trim8-201ENSMUST00000026008 Tacc1Q6Y685 774 aa18.48■□□□□ 0.55
Trim8-201ENSMUST00000026008 Uap1Q91YN5 522 aa18.48■□□□□ 0.55
Trim8-201ENSMUST00000026008 Myo1hQ9D6A1 958 aa18.48■□□□□ 0.55
Trim8-201ENSMUST00000026008 Egfl6Q9JJZ5 550 aa18.48■□□□□ 0.55
Trim8-201ENSMUST00000026008 Eva1cP58659 440 aa18.48■□□□□ 0.55
Trim8-201ENSMUST00000026008 LpxnQ99N69 386 aa18.48■□□□□ 0.55
Trim8-201ENSMUST00000026008 Uchl5Q9WUP7 329 aa18.48■□□□□ 0.55
Trim8-201ENSMUST00000026008 Col20a1Q923P0 1320 aa18.48■□□□□ 0.55
Trim8-201ENSMUST00000026008 Rgs22G3UYX5 1258 aa18.47■□□□□ 0.55
Trim8-201ENSMUST00000026008 Celf1P28659 486 aaKnown RBP18.47■□□□□ 0.55
Trim8-201ENSMUST00000026008 Cyp4f39Q8BGU0 532 aa18.47■□□□□ 0.55
Trim8-201ENSMUST00000026008 Hgh1Q8C3I8 393 aa18.47■□□□□ 0.55
Trim8-201ENSMUST00000026008 Prc1Q99K43 603 aaKnown RBP18.47■□□□□ 0.55
Trim8-201ENSMUST00000026008 Pak1O88643 545 aa18.47■□□□□ 0.55
Trim8-201ENSMUST00000026008 Mdh1P14152 334 aa18.47■□□□□ 0.55
Trim8-201ENSMUST00000026008 Chp1P61022 195 aa18.47■□□□□ 0.55
Trim8-201ENSMUST00000026008 Mars2Q499X9 586 aaKnown RBP18.47■□□□□ 0.55
Trim8-201ENSMUST00000026008 HdlbpQ8VDJ3 1268 aaKnown RBP18.47■□□□□ 0.55
Trim8-201ENSMUST00000026008 Klc3Q91W40 508 aa18.47■□□□□ 0.55
Trim8-201ENSMUST00000026008 Gpaa1Q9WTK3 621 aa18.47■□□□□ 0.55
Trim8-201ENSMUST00000026008 Madcam1Q61826 405 aa18.47■□□□□ 0.55
Trim8-201ENSMUST00000026008 Phldb2Q8K1N2 1249 aa18.47■□□□□ 0.55
Trim8-201ENSMUST00000026008 Eif4enif1Q9EST3 983 aaKnown RBP18.47■□□□□ 0.55
Trim8-201ENSMUST00000026008 CluhQ5SW19 1315 aa18.47■□□□□ 0.55
Trim8-201ENSMUST00000026008 Gm36210A0A1B0GS00 229 aa18.46■□□□□ 0.55
Trim8-201ENSMUST00000026008 Gm5134E9QAB5 671 aa18.46■□□□□ 0.55
Trim8-201ENSMUST00000026008 Pbx1P41778 430 aa18.46■□□□□ 0.55
Trim8-201ENSMUST00000026008 Olfr121Q5CZY0 321 aa18.46■□□□□ 0.55
Trim8-201ENSMUST00000026008 Cdc23Q8BGZ4 597 aa18.46■□□□□ 0.55
Trim8-201ENSMUST00000026008 Gimap7Q8R379 293 aa18.46■□□□□ 0.55
Trim8-201ENSMUST00000026008 Krt82Q99M74 516 aa18.46■□□□□ 0.55
Trim8-201ENSMUST00000026008 Copb1Q9JIF7 953 aa18.46■□□□□ 0.55
Trim8-201ENSMUST00000026008 Lgr5Q9Z1P4 907 aa18.46■□□□□ 0.55
Trim8-201ENSMUST00000026008 Ube4aE9Q735 1028 aa18.46■□□□□ 0.55
Trim8-201ENSMUST00000026008 Lrrc6O88978 473 aa18.46■□□□□ 0.55
Trim8-201ENSMUST00000026008 Plekha7Q3UIL6 1118 aaKnown RBP18.46■□□□□ 0.55
Trim8-201ENSMUST00000026008 Ccdc57Q6PHN1 1016 aa18.46■□□□□ 0.55
Trim8-201ENSMUST00000026008 Ppfibp1Q8C8U0 969 aaKnown RBP18.46■□□□□ 0.55
Trim8-201ENSMUST00000026008 Fam161bQ8CB59 589 aa18.46■□□□□ 0.55
Trim8-201ENSMUST00000026008 Mtfr1lQ9CWE0 289 aa18.46■□□□□ 0.55
Trim8-201ENSMUST00000026008 Sorbs3Q9R1Z8 733 aa18.46■□□□□ 0.55
Trim8-201ENSMUST00000026008 AfdnQ9QZQ1 1820 aaKnown RBP18.46■□□□□ 0.55
Trim8-201ENSMUST00000026008 Znfx1Q8R151 1909 aaKnown RBP18.46■□□□□ 0.54
Trim8-201ENSMUST00000026008 Apol7aB2RT54 418 aa18.45■□□□□ 0.54
Trim8-201ENSMUST00000026008 Exoc3l2D3YUP5 789 aa18.45■□□□□ 0.54
Trim8-201ENSMUST00000026008 MthfslL7N466 203 aa18.45■□□□□ 0.54
Trim8-201ENSMUST00000026008 Pth1rP41593 591 aa18.45■□□□□ 0.54
Trim8-201ENSMUST00000026008 Mum1l1Q4VA55 681 aa18.45■□□□□ 0.54
Trim8-201ENSMUST00000026008 Jakmip3Q5DTN8 844 aa18.45■□□□□ 0.54
Trim8-201ENSMUST00000026008 Adck2Q6NSR3 617 aa18.45■□□□□ 0.54
Trim8-201ENSMUST00000026008 Txndc16Q7TN22 820 aa18.45■□□□□ 0.54
Trim8-201ENSMUST00000026008 LarsQ8BMJ2 1178 aa18.45■□□□□ 0.54
Trim8-201ENSMUST00000026008 Bicdl2Q8CHW5 507 aa18.45■□□□□ 0.54
Trim8-201ENSMUST00000026008 Ttc14Q9CSP9 761 aa18.45■□□□□ 0.54
Trim8-201ENSMUST00000026008 Fam217aQ9D9W6 419 aa18.45■□□□□ 0.54
Trim8-201ENSMUST00000026008 Gja10Q9WUS4 505 aa18.45■□□□□ 0.54
Trim8-201ENSMUST00000026008 Ankrd31A0A140LI88 1765 aa18.45■□□□□ 0.54
Trim8-201ENSMUST00000026008 LbrQ3U9G9 626 aaKnown RBP18.45■□□□□ 0.54
Trim8-201ENSMUST00000026008 DSCC1Q14AI0 399 aa18.45■□□□□ 0.54
Trim8-201ENSMUST00000026008 Cep112Q5PR68 954 aa18.45■□□□□ 0.54
Trim8-201ENSMUST00000026008 Adam6bQ6IMH7 756 aa18.45■□□□□ 0.54
Trim8-201ENSMUST00000026008 Smarca1Q6PGB8 1046 aa18.45■□□□□ 0.54
Trim8-201ENSMUST00000026008 Setdb2Q8C267 713 aa18.45■□□□□ 0.54
Trim8-201ENSMUST00000026008 Sh3bp5lQ99LH9 392 aa18.45■□□□□ 0.54
Trim8-201ENSMUST00000026008 Calml3Q9D6P8 149 aa18.45■□□□□ 0.54
Trim8-201ENSMUST00000026008 PpardP35396 440 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Tshz1Q5DTH5 1084 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Igbp1Q61249 340 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Ppp2r5bQ6PD28 497 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Tekt3Q6X6Z7 490 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Adck5Q80V03 582 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Epha10Q8BYG9 1007 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Tango6Q8C3S2 1079 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 RadxQ8C779 850 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Phc3Q8CHP6 981 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Dbndd1Q9CZ00 160 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 DonsonQ9QXP4 560 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 EcsitQ9QZH6 435 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Capn2O08529 700 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Stag2O35638 1231 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Nr5a1P33242 462 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Evi5P97366 809 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Hpcal4Q8BGZ1 191 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 E2f4Q8R0K9 410 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Uso1Q9Z1Z0 959 aaKnown RBP18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 MeiocA2AG06 965 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Akr1c19G3X9Y6 323 aa18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Calm1P0DP26 149 aaKnown RBP18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Calm2P0DP27 149 aaKnown RBP18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 Calm3P0DP28 149 aaKnown RBP18.44■□□□□ 0.54
Trim8-201ENSMUST00000026008 PcQ05920 1178 aa18.44■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms