RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C ENO2P00925 437 aaKnown RBP2.4□□□□□ -2.03
VPS13YLL040C ADE4P04046 510 aaKnown RBP2.4□□□□□ -2.03
VPS13YLL040C VAN1P23642 535 aa2.4□□□□□ -2.03
VPS13YLL040C VPH1P32563 840 aaKnown RBP2.4□□□□□ -2.03
VPS13YLL040C RCK1P38622 512 aa2.4□□□□□ -2.03
VPS13YLL040C YHR218WP38899 603 aa2.4□□□□□ -2.03
VPS13YLL040C DLD2P46681 530 aaKnown RBP2.4□□□□□ -2.03
VPS13YLL040C YJL049WP47048 450 aa2.4□□□□□ -2.03
VPS13YLL040C TAH11P47112 604 aa2.4□□□□□ -2.03
VPS13YLL040C NOP19P53317 196 aaPredicted RBP2.4□□□□□ -2.03
VPS13YLL040C PRP38Q00723 242 aaPredicted RBP2.4□□□□□ -2.03
VPS13YLL040C UBP3Q01477 912 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03 RIP-Chip
VPS13YLL040C MUB1Q03162 620 aa2.4□□□□□ -2.03
VPS13YLL040C VMS1Q04311 632 aaKnown RBP2.4□□□□□ -2.03
VPS13YLL040C DBP9Q06218 594 aaKnown RBP2.4□□□□□ -2.03
VPS13YLL040C BCP1Q06338 283 aa2.4□□□□□ -2.03
VPS13YLL040C UTP4Q06679 776 aaKnown RBP2.4□□□□□ -2.03
VPS13YLL040C UBX5Q06682 500 aa2.4□□□□□ -2.03
VPS13YLL040C PUS7Q08647 676 aaKnown RBP2.4□□□□□ -2.03
VPS13YLL040C RIB2Q12362 591 aaKnown RBP2.4□□□□□ -2.03
VPS13YLL040C TKL1P23254 680 aaKnown RBP2.39□□□□□ -2.03
VPS13YLL040C PAT1P25644 796 aaKnown RBP2.39□□□□□ -2.03
VPS13YLL040C SAF1P38352 637 aa2.39□□□□□ -2.03
VPS13YLL040C CCT6P39079 546 aa2.39□□□□□ -2.03
VPS13YLL040C ZRG8P40021 1076 aa2.39□□□□□ -2.03
VPS13YLL040C RRN5Q02983 363 aa2.39□□□□□ -2.03
VPS13YLL040C BRE4Q07660 1125 aa2.39□□□□□ -2.03
VPS13YLL040C LAP2Q10740 671 aa2.39□□□□□ -2.03
VPS13YLL040C RRP43P25359 394 aaPredicted RBP2.39□□□□□ -2.03
VPS13YLL040C SGF29P25554 259 aa2.39□□□□□ -2.03
VPS13YLL040C PIM1P36775 1133 aa2.39□□□□□ -2.03
VPS13YLL040C KEL1P38853 1164 aaKnown RBP2.39□□□□□ -2.03
VPS13YLL040C TMN3P40071 706 aa2.39□□□□□ -2.03
VPS13YLL040C BUR6P40096 142 aa2.39□□□□□ -2.03
VPS13YLL040C EMC2P47133 292 aaKnown RBP2.39□□□□□ -2.03
VPS13YLL040C CCE1Q03702 353 aa2.39□□□□□ -2.03
VPS13YLL040C ATG20Q07528 640 aa2.39□□□□□ -2.03
VPS13YLL040C TRM8Q12009 286 aa2.39□□□□□ -2.03
VPS13YLL040C TDH1P00360 332 aaKnown RBP2.39□□□□□ -2.03
VPS13YLL040C SSC1P0CS90 654 aaKnown RBP2.39□□□□□ -2.03
VPS13YLL040C SPT14P32363 452 aa2.39□□□□□ -2.03
VPS13YLL040C OCT1P35999 772 aa2.39□□□□□ -2.03
VPS13YLL040C ETP1P38748 585 aaKnown RBP2.39□□□□□ -2.03
VPS13YLL040C CRP1P38845 465 aaKnown RBP2.39□□□□□ -2.03
VPS13YLL040C TDA11P38854 504 aa2.39□□□□□ -2.03
VPS13YLL040C THO1P40040 218 aaKnown RBP2.39□□□□□ -2.03
VPS13YLL040C ATP22P50273 684 aaPredicted RBP2.39□□□□□ -2.03
VPS13YLL040C ARC35P53731 342 aaKnown RBP2.39□□□□□ -2.03
VPS13YLL040C CUS2P53830 285 aaPredicted RBP2.39□□□□□ -2.03
VPS13YLL040C YML037CQ03703 340 aa2.39□□□□□ -2.03
VPS13YLL040C RRT8Q08219 342 aa2.39□□□□□ -2.03
VPS13YLL040C BRF1P29056 596 aa2.39□□□□□ -2.03
VPS13YLL040C GPT2P36148 743 aa2.39□□□□□ -2.03
VPS13YLL040C YBR284WP38150 797 aa2.39□□□□□ -2.03
VPS13YLL040C UBP14P38237 781 aaKnown RBP2.39□□□□□ -2.03
VPS13YLL040C MNN9P39107 395 aaKnown RBP2.39□□□□□ -2.03
VPS13YLL040C RCY1P39531 840 aa2.39□□□□□ -2.03
VPS13YLL040C PRO2P54885 456 aaKnown RBP2.39□□□□□ -2.03
VPS13YLL040C AIM33Q04516 312 aa2.39□□□□□ -2.03
VPS13YLL040C ASR1Q06834 288 aa2.39□□□□□ -2.03
VPS13YLL040C MFG1Q07684 458 aa2.39□□□□□ -2.03
VPS13YLL040C YOR342CQ12182 319 aa2.39□□□□□ -2.03
VPS13YLL040C ENO1P00924 437 aaKnown RBP2.39□□□□□ -2.03
VPS13YLL040C SPT3P06844 337 aa2.39□□□□□ -2.03
VPS13YLL040C SBP1P10080 294 aaKnown RBP2.39□□□□□ -2.03
VPS13YLL040C GAL3P13045 520 aa2.39□□□□□ -2.03
VPS13YLL040C GAC1P28006 793 aa2.39□□□□□ -2.03
VPS13YLL040C RFS1P38234 210 aaKnown RBP2.39□□□□□ -2.03
VPS13YLL040C MNP1P53163 194 aaPredicted RBP2.39□□□□□ -2.03
VPS13YLL040C UGO1Q03327 502 aa2.39□□□□□ -2.03
VPS13YLL040C RSM24Q03976 319 aa2.39□□□□□ -2.03
VPS13YLL040C GMC2Q06201 188 aa2.39□□□□□ -2.03
VPS13YLL040C YOR022CQ12204 715 aa2.39□□□□□ -2.03
VPS13YLL040C JIP3O13555 125 aa2.39□□□□□ -2.03
VPS13YLL040C TPK1P06244 397 aa2.39□□□□□ -2.03
VPS13YLL040C CDC24P11433 854 aaPredicted RBP2.39□□□□□ -2.03
VPS13YLL040C CLN1P20437 546 aa2.39□□□□□ -2.03
VPS13YLL040C KRE6P32486 720 aa2.39□□□□□ -2.03
VPS13YLL040C RGT1P32862 1170 aa2.39□□□□□ -2.03
VPS13YLL040C YPT52P36018 234 aaKnown RBP2.39□□□□□ -2.03
VPS13YLL040C YHL041WP38730 149 aa2.39□□□□□ -2.03
VPS13YLL040C YER156CP40093 338 aaKnown RBP2.39□□□□□ -2.03
VPS13YLL040C PRE6P40303 254 aaKnown RBP2.39□□□□□ -2.03
VPS13YLL040C NIT1P40447 199 aa2.39□□□□□ -2.03
VPS13YLL040C MET13P53128 600 aa2.39□□□□□ -2.03
VPS13YLL040C GET1P53192 235 aa2.39□□□□□ -2.03
VPS13YLL040C YML108WQ03759 105 aa2.39□□□□□ -2.03
VPS13YLL040C SPC19Q03954 165 aa2.39□□□□□ -2.03
VPS13YLL040C YOL036WQ08206 761 aa2.39□□□□□ -2.03
VPS13YLL040C ESA1Q08649 445 aa2.39□□□□□ -2.03
VPS13YLL040C RMD5Q12508 421 aa2.39□□□□□ -2.03
VPS13YLL040C GLN3P18494 730 aa2.39□□□□□ -2.03
VPS13YLL040C CDC20P26309 610 aa2.39□□□□□ -2.03
VPS13YLL040C GUT2P32191 649 aa2.39□□□□□ -2.03
VPS13YLL040C TIF3P34167 436 aaKnown RBP2.39□□□□□ -2.03
VPS13YLL040C YBR071WP38243 211 aa2.39□□□□□ -2.03
VPS13YLL040C YHR182WP38870 785 aa2.39□□□□□ -2.03
VPS13YLL040C AYR1P40471 297 aa2.39□□□□□ -2.03
VPS13YLL040C KTR7P40504 517 aa2.39□□□□□ -2.03
VPS13YLL040C IRC7P43623 340 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 6.9 ms