RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 CCDC82Q8N4S0 544 aa20.49■□□□□ 0.87
PHGDH-232ENST00000641947 MTMR14Q8NCE2 650 aa20.49■□□□□ 0.87
PHGDH-232ENST00000641947 CEP95Q96GE4 821 aa20.49■□□□□ 0.87
PHGDH-232ENST00000641947 TMEM47Q9BQJ4 181 aa20.49■□□□□ 0.87
PHGDH-232ENST00000641947 KIF3AQ9Y496 699 aa20.49■□□□□ 0.87
PHGDH-232ENST00000641947 ENTPD3O75355 529 aa20.48■□□□□ 0.87
PHGDH-232ENST00000641947 PRPF40AO75400 957 aaKnown RBP20.48■□□□□ 0.87
PHGDH-232ENST00000641947 EGFRP00533 1210 aa20.48■□□□□ 0.87
PHGDH-232ENST00000641947 NOVP48745 357 aa20.48■□□□□ 0.87
PHGDH-232ENST00000641947 SHROOM1Q2M3G4 852 aaPredicted RBP20.48■□□□□ 0.87
PHGDH-232ENST00000641947 CPLX2Q6PUV4 134 aaKnown RBP20.48■□□□□ 0.87
PHGDH-232ENST00000641947 RASGRP2Q7LDG7 609 aa20.48■□□□□ 0.87
PHGDH-232ENST00000641947 CLEC10AQ8IUN9 316 aa20.48■□□□□ 0.87
PHGDH-232ENST00000641947 CRACR2BQ8N4Y2 399 aaPredicted RBP20.48■□□□□ 0.87
PHGDH-232ENST00000641947 PNMA1Q8ND90 353 aa20.48■□□□□ 0.87
PHGDH-232ENST00000641947 SWAP70Q9UH65 585 aa20.48■□□□□ 0.87
PHGDH-232ENST00000641947 IGKV6D-41A0A0C4DH26 115 aa20.47■□□□□ 0.87
PHGDH-232ENST00000641947 TCP10L2B9ZVM9 353 aa20.47■□□□□ 0.87
PHGDH-232ENST00000641947 GOLGA6L22H0YM25 854 aa20.47■□□□□ 0.87
PHGDH-232ENST00000641947 TNIP1Q15025 636 aa20.47■□□□□ 0.87
PHGDH-232ENST00000641947 FBXO18Q8NFZ0 1043 aa20.47■□□□□ 0.87
PHGDH-232ENST00000641947 C8orf76Q96K31 380 aa20.47■□□□□ 0.87
PHGDH-232ENST00000641947 DHX36Q9H2U1 1008 aaKnown RBP20.47■□□□□ 0.87
PHGDH-232ENST00000641947 KAT14Q9H8E8 782 aa20.47■□□□□ 0.87
PHGDH-232ENST00000641947 STX8Q9UNK0 236 aa20.47■□□□□ 0.87
PHGDH-232ENST00000641947 CALM1P0DP23 149 aa20.46■□□□□ 0.87
PHGDH-232ENST00000641947 CALM2P0DP24 149 aa20.46■□□□□ 0.87
PHGDH-232ENST00000641947 CALM3P0DP25 149 aa20.46■□□□□ 0.87
PHGDH-232ENST00000641947 SSRP1Q08945 709 aaKnown RBP20.46■□□□□ 0.87
PHGDH-232ENST00000641947 NBPF9Q3BBW0 867 aa20.46■□□□□ 0.87
PHGDH-232ENST00000641947 TMTC3Q6ZXV5 915 aa20.46■□□□□ 0.87
PHGDH-232ENST00000641947 ZSCAN29Q8IWY8 852 aaPredicted RBP20.46■□□□□ 0.87
PHGDH-232ENST00000641947 SYT17Q9BSW7 474 aa20.46■□□□□ 0.87
PHGDH-232ENST00000641947 ALG1Q9BT22 464 aa20.46■□□□□ 0.87
PHGDH-232ENST00000641947 CCDC196A0A1B0GTZ2 297 aa20.46■□□□□ 0.87
PHGDH-232ENST00000641947 WNT10BO00744 389 aa20.46■□□□□ 0.87
PHGDH-232ENST00000641947 MYOZ2Q9NPC6 264 aa20.46■□□□□ 0.87
PHGDH-232ENST00000641947 PI4KBQ9UBF8 816 aa20.46■□□□□ 0.87
PHGDH-232ENST00000641947 CNTNAP5Q8WYK1 1306 aa20.45■□□□□ 0.86
PHGDH-232ENST00000641947 GMPSP49915 693 aaPredicted RBP20.45■□□□□ 0.86
PHGDH-232ENST00000641947 ZNF280AP59817 542 aaPredicted RBP20.45■□□□□ 0.86
PHGDH-232ENST00000641947 PPP2R5BQ15173 497 aa20.45■□□□□ 0.86
PHGDH-232ENST00000641947 CCDC178Q5BJE1 867 aa20.45■□□□□ 0.86
PHGDH-232ENST00000641947 ARHGAP27Q6ZUM4 889 aa20.45■□□□□ 0.86
PHGDH-232ENST00000641947 USP48Q86UV5 1035 aa20.45■□□□□ 0.86
PHGDH-232ENST00000641947 CDAN1Q8IWY9 1227 aa20.45■□□□□ 0.86
PHGDH-232ENST00000641947 SRBD1Q8N5C6 995 aaKnown RBP20.45■□□□□ 0.86
PHGDH-232ENST00000641947 SHISA4Q96DD7 197 aa20.45■□□□□ 0.86
PHGDH-232ENST00000641947 RBM28Q9NW13 759 aaKnown RBP20.45■□□□□ 0.86
PHGDH-232ENST00000641947 ATP6V1DQ9Y5K8 247 aa20.45■□□□□ 0.86
PHGDH-232ENST00000641947 METTL16Q86W50 562 aaKnown RBP20.44■□□□□ 0.86
PHGDH-232ENST00000641947 TMEM87AQ8NBN3 555 aa20.44■□□□□ 0.86
PHGDH-232ENST00000641947 GJA3Q9Y6H8 435 aa20.44■□□□□ 0.86
PHGDH-232ENST00000641947 hCG_1642624A0A1W2PR95 340 aa20.44■□□□□ 0.86
PHGDH-232ENST00000641947 KIF28PB7ZC32 967 aa20.44■□□□□ 0.86
PHGDH-232ENST00000641947 FIBPO43427 364 aa20.44■□□□□ 0.86
PHGDH-232ENST00000641947 GADD45BO75293 160 aaPredicted RBP20.44■□□□□ 0.86
PHGDH-232ENST00000641947 EIF6P56537 245 aaKnown RBP20.44■□□□□ 0.86
PHGDH-232ENST00000641947 GRM4Q14833 912 aa20.44■□□□□ 0.86
PHGDH-232ENST00000641947 PKN1Q16512 942 aa20.44■□□□□ 0.86
PHGDH-232ENST00000641947 SLC35G1Q2M3R5 365 aa20.44■□□□□ 0.86
PHGDH-232ENST00000641947 STAG2Q8N3U4 1231 aa20.44■□□□□ 0.86
PHGDH-232ENST00000641947 GPT2Q8TD30 523 aa20.44■□□□□ 0.86
PHGDH-232ENST00000641947 MTMR4Q9NYA4 1195 aa20.44■□□□□ 0.86
PHGDH-232ENST00000641947 TAOK2Q9UL54 1235 aa20.44■□□□□ 0.86
PHGDH-232ENST00000641947 YBX3P16989 372 aaKnown RBP eCLIP20.43■□□□□ 0.863e-7■□□□□ 10
PHGDH-232ENST00000641947 RPS12P25398 132 aaKnown RBP20.43■□□□□ 0.86
PHGDH-232ENST00000641947 TATDN1Q6P1N9 297 aa20.43■□□□□ 0.86
PHGDH-232ENST00000641947 CTCFLQ8NI51 663 aaPredicted RBP20.43■□□□□ 0.86
PHGDH-232ENST00000641947 RNF26Q9BY78 433 aaPredicted RBP20.43■□□□□ 0.86
PHGDH-232ENST00000641947 VEZTQ9HBM0 779 aa20.43■□□□□ 0.86
PHGDH-232ENST00000641947 TMOD2Q9NZR1 351 aa20.43■□□□□ 0.86
PHGDH-232ENST00000641947 MAD2L2Q9UI95 211 aa20.43■□□□□ 0.86
PHGDH-232ENST00000641947 NCLP19338 710 aaKnown RBP20.42■□□□□ 0.86
PHGDH-232ENST00000641947 PTMSP20962 102 aa20.42■□□□□ 0.86
PHGDH-232ENST00000641947 RRP1BQ14684 758 aaKnown RBP20.42■□□□□ 0.86
PHGDH-232ENST00000641947 KRT40Q6A162 431 aa20.42■□□□□ 0.86
PHGDH-232ENST00000641947 MICALL2Q8IY33 904 aa20.42■□□□□ 0.86
PHGDH-232ENST00000641947 FAM151AQ8WW52 585 aa20.42■□□□□ 0.86
PHGDH-232ENST00000641947 CSRNP1Q96S65 589 aa20.42■□□□□ 0.86
PHGDH-232ENST00000641947 ZSCAN16Q9H4T2 348 aaPredicted RBP20.42■□□□□ 0.86
PHGDH-232ENST00000641947 SCAF8Q9UPN6 1271 aaKnown RBP20.42■□□□□ 0.86
PHGDH-232ENST00000641947 MTMR7Q9Y216 660 aa20.42■□□□□ 0.86
PHGDH-232ENST00000641947 ATAD5Q96QE3 1844 aa20.41■□□□□ 0.86
PHGDH-232ENST00000641947 DEXIO95424 95 aa20.41■□□□□ 0.86
PHGDH-232ENST00000641947 KIF23Q02241 960 aaPredicted RBP20.41■□□□□ 0.86
PHGDH-232ENST00000641947 TRIM22Q8IYM9 498 aa20.41■□□□□ 0.86
PHGDH-232ENST00000641947 MAP3K14Q99558 947 aa20.41■□□□□ 0.86
PHGDH-232ENST00000641947 PGAP2Q9UHJ9 254 aa20.41■□□□□ 0.86
PHGDH-232ENST00000641947 ASTN2O75129 1339 aaPredicted RBP20.41■□□□□ 0.86
PHGDH-232ENST00000641947 PRPF3O43395 683 aaKnown RBP20.41■□□□□ 0.86
PHGDH-232ENST00000641947 TOP1P11387 765 aaKnown RBP20.41■□□□□ 0.86
PHGDH-232ENST00000641947 LMNB1P20700 586 aa20.41■□□□□ 0.86
PHGDH-232ENST00000641947 JAG1P78504 1218 aa20.41■□□□□ 0.86
PHGDH-232ENST00000641947 FKBP1CQ5VVH2 108 aa20.41■□□□□ 0.86
PHGDH-232ENST00000641947 SAMD7Q7Z3H4 446 aa20.41■□□□□ 0.86
PHGDH-232ENST00000641947 FOXP4Q8IVH2 680 aaPredicted RBP20.41■□□□□ 0.86
PHGDH-232ENST00000641947 TMEM39BQ9GZU3 492 aa20.41■□□□□ 0.86
PHGDH-232ENST00000641947 TFIP11Q9UBB9 837 aaKnown RBP20.41■□□□□ 0.86
PHGDH-232ENST00000641947 RBM26Q5T8P6 1007 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms