RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 INPP5BP32019 993 aa15.17■□□□□ 0.02
PHGDH-220ENST00000641570 USP14P54578 494 aa15.17■□□□□ 0.02
PHGDH-220ENST00000641570 HUNKP57058 714 aa15.17■□□□□ 0.02
PHGDH-220ENST00000641570 MAP3K10Q02779 954 aa15.17■□□□□ 0.02
PHGDH-220ENST00000641570 VGLL4Q14135 290 aa15.17■□□□□ 0.02
PHGDH-220ENST00000641570 SEPT2Q15019 361 aa15.17■□□□□ 0.02
PHGDH-220ENST00000641570 NOL9Q5SY16 702 aaKnown RBP15.17■□□□□ 0.02
PHGDH-220ENST00000641570 DLK2Q6UY11 383 aa15.17■□□□□ 0.02
PHGDH-220ENST00000641570 DGKHQ86XP1 1220 aa15.17■□□□□ 0.02
PHGDH-220ENST00000641570 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.17■□□□□ 0.02
PHGDH-220ENST00000641570 CEP95Q96GE4 821 aa15.17■□□□□ 0.02
PHGDH-220ENST00000641570 TTC14Q96N46 770 aa15.17■□□□□ 0.02
PHGDH-220ENST00000641570 LRRC2Q9BYS8 371 aa15.17■□□□□ 0.02
PHGDH-220ENST00000641570 TMOD4Q9NZQ9 345 aa15.17■□□□□ 0.02
PHGDH-220ENST00000641570 CLIP2Q9UDT6 1046 aa15.17■□□□□ 0.02
PHGDH-220ENST00000641570 MTMR7Q9Y216 660 aa15.17■□□□□ 0.02
PHGDH-220ENST00000641570 TAF6LQ9Y6J9 622 aa15.17■□□□□ 0.02
PHGDH-220ENST00000641570 UBE2Q2LH0YL09 131 aa15.16■□□□□ 0.02
PHGDH-220ENST00000641570 SH2B2O14492 632 aaPredicted RBP15.16■□□□□ 0.02
PHGDH-220ENST00000641570 CALM1P0DP23 149 aa15.16■□□□□ 0.02
PHGDH-220ENST00000641570 CALM2P0DP24 149 aa15.16■□□□□ 0.02
PHGDH-220ENST00000641570 CALM3P0DP25 149 aa15.16■□□□□ 0.02
PHGDH-220ENST00000641570 TOP1P11387 765 aaKnown RBP15.16■□□□□ 0.02
PHGDH-220ENST00000641570 CPA1P15085 419 aa15.16■□□□□ 0.02
PHGDH-220ENST00000641570 IKQ13123 557 aaPredicted RBP15.16■□□□□ 0.02
PHGDH-220ENST00000641570 CPLX2Q6PUV4 134 aaKnown RBP15.16■□□□□ 0.02
PHGDH-220ENST00000641570 CYB5R4Q7L1T6 521 aa15.16■□□□□ 0.02
PHGDH-220ENST00000641570 NUP133Q8WUM0 1156 aa15.16■□□□□ 0.02
PHGDH-220ENST00000641570 BRF1Q92994 677 aa15.16■□□□□ 0.02
PHGDH-220ENST00000641570 TCEANC2Q96MN5 208 aa15.16■□□□□ 0.02
PHGDH-220ENST00000641570 ZNF112Q9UJU3 913 aa15.16■□□□□ 0.02
PHGDH-220ENST00000641570 FZD1Q9UP38 647 aa15.16■□□□□ 0.02
PHGDH-220ENST00000641570 GOLGA8BA8MQT2 603 aa15.15■□□□□ 0.02
PHGDH-220ENST00000641570 PHF20L1A8MW92 1017 aa15.15■□□□□ 0.02
PHGDH-220ENST00000641570 ITGBL1O95965 494 aaPredicted RBP15.15■□□□□ 0.02
PHGDH-220ENST00000641570 KIF5BP33176 963 aa15.15■□□□□ 0.02
PHGDH-220ENST00000641570 MAP3K11Q16584 847 aa15.15■□□□□ 0.02
PHGDH-220ENST00000641570 CCDC96Q2M329 555 aa15.15■□□□□ 0.02
PHGDH-220ENST00000641570 ERO1BQ86YB8 467 aa15.15■□□□□ 0.02
PHGDH-220ENST00000641570 CTCFLQ8NI51 663 aaPredicted RBP15.15■□□□□ 0.02
PHGDH-220ENST00000641570 OTUD5Q96G74 571 aa15.15■□□□□ 0.02
PHGDH-220ENST00000641570 MTMR4Q9NYA4 1195 aa15.15■□□□□ 0.02
PHGDH-220ENST00000641570 NYAP2Q9P242 653 aa15.15■□□□□ 0.02
PHGDH-220ENST00000641570 ZHX2Q9Y6X8 837 aa15.15■□□□□ 0.02
PHGDH-220ENST00000641570 PAPPA2Q9BXP8 1791 aa15.15■□□□□ 0.02
PHGDH-220ENST00000641570 SSC5DA1L4H1 1573 aa15.15■□□□□ 0.02
PHGDH-220ENST00000641570 KLF18A0A0U1RQI7 1052 aa15.14■□□□□ 0.01
PHGDH-220ENST00000641570 TRIM75PA6NK02 468 aa15.14■□□□□ 0.01
PHGDH-220ENST00000641570 DHX16O60231 1041 aaKnown RBP15.14■□□□□ 0.01
PHGDH-220ENST00000641570 SLURP2P0DP57 97 aa15.14■□□□□ 0.01
PHGDH-220ENST00000641570 EEF2P13639 858 aaKnown RBP15.14■□□□□ 0.01
PHGDH-220ENST00000641570 PTPRAP18433 802 aa15.14■□□□□ 0.01
PHGDH-220ENST00000641570 LIFRP42702 1097 aa15.14■□□□□ 0.01
PHGDH-220ENST00000641570 ZNF157P51786 506 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-220ENST00000641570 PPATQ06203 517 aa15.14■□□□□ 0.01
PHGDH-220ENST00000641570 ZYXQ15942 572 aaKnown RBP15.14■□□□□ 0.01
PHGDH-220ENST00000641570 LRRC47Q8N1G4 583 aaKnown RBP15.14■□□□□ 0.01
PHGDH-220ENST00000641570 ENAHQ8N8S7 591 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-220ENST00000641570 ZNF280CQ8ND82 737 aa15.14■□□□□ 0.01
PHGDH-220ENST00000641570 PNMA1Q8ND90 353 aa15.14■□□□□ 0.01
PHGDH-220ENST00000641570 CTDP1Q9Y5B0 961 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-220ENST00000641570 CCDC196A0A1B0GTZ2 297 aa15.13■□□□□ 0.01
PHGDH-220ENST00000641570 GOLGA8AA7E2F4 631 aa15.13■□□□□ 0.01
PHGDH-220ENST00000641570 USP17L10C9JJH3 530 aa15.13■□□□□ 0.01
PHGDH-220ENST00000641570 CPLX1O14810 134 aa15.13■□□□□ 0.01
PHGDH-220ENST00000641570 ZBTB43O43298 467 aa15.13■□□□□ 0.01
PHGDH-220ENST00000641570 NMT2O60551 498 aa15.13■□□□□ 0.01
PHGDH-220ENST00000641570 DDAH1O94760 285 aa15.13■□□□□ 0.01
PHGDH-220ENST00000641570 METAP2P50579 478 aaKnown RBP eCLIP15.13■□□□□ 0.011e-10■■■□□ 15.8
PHGDH-220ENST00000641570 AK2P54819 239 aa15.13■□□□□ 0.01
PHGDH-220ENST00000641570 MOB2Q70IA6 237 aa15.13■□□□□ 0.01
PHGDH-220ENST00000641570 MICU3Q86XE3 530 aa15.13■□□□□ 0.01
PHGDH-220ENST00000641570 OPTNQ96CV9 577 aa15.13■□□□□ 0.01
PHGDH-220ENST00000641570 IL17RAQ96F46 866 aa15.13■□□□□ 0.01
PHGDH-220ENST00000641570 ZSCAN31Q96LW9 406 aaPredicted RBP15.13■□□□□ 0.01
PHGDH-220ENST00000641570 SLKQ9H2G2 1235 aaPredicted RBP15.13■□□□□ 0.01
PHGDH-220ENST00000641570 SYNPO2Q9UMS6 1093 aa15.13■□□□□ 0.01
PHGDH-220ENST00000641570 PASKQ96RG2 1323 aa15.13■□□□□ 0.01
PHGDH-220ENST00000641570 C19orf81C9J6K1 198 aa15.12■□□□□ 0.01
PHGDH-220ENST00000641570 SLC1A4P43007 532 aa15.12■□□□□ 0.01
PHGDH-220ENST00000641570 ANTXR2P58335 489 aa15.12■□□□□ 0.01
PHGDH-220ENST00000641570 EXOSC10Q01780 885 aaKnown RBP15.12■□□□□ 0.01
PHGDH-220ENST00000641570 FMR1Q06787 632 aaKnown RBP eCLIP15.12■□□□□ 0.018e-7■■□□□ 12
PHGDH-220ENST00000641570 APOBRQ0VD83 1088 aa15.12■□□□□ 0.01
PHGDH-220ENST00000641570 GRM1Q13255 1194 aa15.12■□□□□ 0.01
PHGDH-220ENST00000641570 PPIL2Q13356 520 aa15.12■□□□□ 0.01
PHGDH-220ENST00000641570 SNAPC2Q13487 334 aa15.12■□□□□ 0.01
PHGDH-220ENST00000641570 USP17L2Q6R6M4 530 aa15.12■□□□□ 0.01
PHGDH-220ENST00000641570 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.12■□□□□ 0.01
PHGDH-220ENST00000641570 ZNF654Q8IZM8 581 aa15.12■□□□□ 0.01
PHGDH-220ENST00000641570 TMEM47Q9BQJ4 181 aa15.12■□□□□ 0.01
PHGDH-220ENST00000641570 LY9Q9HBG7 655 aa15.12■□□□□ 0.01
PHGDH-220ENST00000641570 SH2B1Q9NRF2 756 aaPredicted RBP15.12■□□□□ 0.01
PHGDH-220ENST00000641570 RBM28Q9NW13 759 aaKnown RBP15.12■□□□□ 0.01
PHGDH-220ENST00000641570 LIMCH1Q9UPQ0 1083 aa15.12■□□□□ 0.01
PHGDH-220ENST00000641570 TACC3Q9Y6A5 838 aa15.12■□□□□ 0.01
PHGDH-220ENST00000641570 SNCAIPQ9Y6H5 919 aa15.12■□□□□ 0.01
PHGDH-220ENST00000641570 SPDYE5A6NIY4 337 aa15.11■□□□□ 0.01
PHGDH-220ENST00000641570 CDKL5O76039 1030 aa15.11■□□□□ 0.01
PHGDH-220ENST00000641570 PARP1P09874 1014 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms