RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 MICU3Q86XE3 530 aa23.21■■□□□ 1.31
PHGDH-210ENST00000641115 ANKS1AQ92625 1134 aa23.21■■□□□ 1.31
PHGDH-210ENST00000641115 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.21■■□□□ 1.31
PHGDH-210ENST00000641115 CABP5Q9NP86 173 aa23.21■■□□□ 1.31
PHGDH-210ENST00000641115 MYH4Q9Y623 1939 aa23.21■■□□□ 1.31
PHGDH-210ENST00000641115 GDF11O95390 407 aa23.2■■□□□ 1.3
PHGDH-210ENST00000641115 METAP2P50579 478 aaKnown RBP eCLIP23.2■■□□□ 1.31e-6■■□□□ 12.1
PHGDH-210ENST00000641115 RCAN1P53805 252 aa23.2■■□□□ 1.3
PHGDH-210ENST00000641115 SCRN1Q12765 414 aa23.2■■□□□ 1.3
PHGDH-210ENST00000641115 IGKV6D-41A0A0C4DH26 115 aa23.19■■□□□ 1.3
PHGDH-210ENST00000641115 VEGFAP15692 232 aaPredicted RBP23.19■■□□□ 1.3
PHGDH-210ENST00000641115 CCT2P78371 535 aaKnown RBP23.19■■□□□ 1.3
PHGDH-210ENST00000641115 SUPT20HL1Q3ZLR7 823 aa23.19■■□□□ 1.3
PHGDH-210ENST00000641115 KRT26Q7Z3Y9 468 aa23.19■■□□□ 1.3
PHGDH-210ENST00000641115 MYL10Q9BUA6 226 aa23.19■■□□□ 1.3
PHGDH-210ENST00000641115 MTMR4Q9NYA4 1195 aa23.19■■□□□ 1.3
PHGDH-210ENST00000641115 GOLGA8AA7E2F4 631 aa23.19■■□□□ 1.3
PHGDH-210ENST00000641115 DHX16O60231 1041 aaKnown RBP23.19■■□□□ 1.3
PHGDH-210ENST00000641115 DDAH1O94760 285 aa23.19■■□□□ 1.3
PHGDH-210ENST00000641115 CALM1P0DP23 149 aa23.19■■□□□ 1.3
PHGDH-210ENST00000641115 CALM2P0DP24 149 aa23.19■■□□□ 1.3
PHGDH-210ENST00000641115 CALM3P0DP25 149 aa23.19■■□□□ 1.3
PHGDH-210ENST00000641115 ST3GAL1Q11201 340 aa23.19■■□□□ 1.3
PHGDH-210ENST00000641115 RAB11FIP4Q86YS3 637 aa23.19■■□□□ 1.3
PHGDH-210ENST00000641115 HPS5Q9UPZ3 1129 aa23.19■■□□□ 1.3
PHGDH-210ENST00000641115 NID2Q14112 1375 aa23.18■■□□□ 1.3
PHGDH-210ENST00000641115 TTLL1O95922 423 aa23.18■■□□□ 1.3
PHGDH-210ENST00000641115 NOVP48745 357 aa23.18■■□□□ 1.3
PHGDH-210ENST00000641115 PRAMEF18Q5VWM3 479 aa23.18■■□□□ 1.3
PHGDH-210ENST00000641115 PNMA1Q8ND90 353 aa23.18■■□□□ 1.3
PHGDH-210ENST00000641115 NUP133Q8WUM0 1156 aa23.18■■□□□ 1.3
PHGDH-210ENST00000641115 KANSL2Q9H9L4 492 aa23.18■■□□□ 1.3
PHGDH-210ENST00000641115 ADM5C9JUS6 153 aa23.17■■□□□ 1.3
PHGDH-210ENST00000641115 GH2P01242 217 aa23.17■■□□□ 1.3
PHGDH-210ENST00000641115 TOP1P11387 765 aaKnown RBP23.17■■□□□ 1.3
PHGDH-210ENST00000641115 RXRAP19793 462 aa23.17■■□□□ 1.3
PHGDH-210ENST00000641115 TMEM47Q9BQJ4 181 aa23.17■■□□□ 1.3
PHGDH-210ENST00000641115 ZNF341Q9BYN7 854 aa23.17■■□□□ 1.3
PHGDH-210ENST00000641115 RRAGCQ9HB90 399 aa23.17■■□□□ 1.3
PHGDH-210ENST00000641115 NCOA5Q9HCD5 579 aaKnown RBP23.17■■□□□ 1.3
PHGDH-210ENST00000641115 CLEC11AQ9Y240 323 aa23.17■■□□□ 1.3
PHGDH-210ENST00000641115 CAP2P40123 477 aa23.16■■□□□ 1.3
PHGDH-210ENST00000641115 RRP1BQ14684 758 aaKnown RBP23.16■■□□□ 1.3
PHGDH-210ENST00000641115 RAB3GAP1Q15042 981 aa23.16■■□□□ 1.3
PHGDH-210ENST00000641115 CCDC144CPQ8IYA2 1237 aa23.16■■□□□ 1.3
PHGDH-210ENST00000641115 CWC22Q9HCG8 908 aaKnown RBP23.16■■□□□ 1.3
PHGDH-210ENST00000641115 SMC3Q9UQE7 1217 aa23.16■■□□□ 1.3
PHGDH-210ENST00000641115 DOCK1Q14185 1865 aa23.16■■□□□ 1.3
PHGDH-210ENST00000641115 CPLX1O14810 134 aa23.15■■□□□ 1.3
PHGDH-210ENST00000641115 ICA1Q05084 483 aa23.15■■□□□ 1.3
PHGDH-210ENST00000641115 SEPT2Q15019 361 aa23.15■■□□□ 1.3
PHGDH-210ENST00000641115 PPP2R5BQ15173 497 aa23.15■■□□□ 1.3
PHGDH-210ENST00000641115 CLEC10AQ8IUN9 316 aa23.15■■□□□ 1.3
PHGDH-210ENST00000641115 LLPHQ9BRT6 129 aaKnown RBP23.15■■□□□ 1.3
PHGDH-210ENST00000641115 ZBTB21Q9ULJ3 1066 aa23.15■■□□□ 1.3
PHGDH-210ENST00000641115 SSC5DA1L4H1 1573 aa23.15■■□□□ 1.3
PHGDH-210ENST00000641115 CCDC196A0A1B0GTZ2 297 aa23.15■■□□□ 1.3
PHGDH-210ENST00000641115 PHF20L1A8MW92 1017 aa23.15■■□□□ 1.3
PHGDH-210ENST00000641115 TROAPQ12815 778 aa23.15■■□□□ 1.3
PHGDH-210ENST00000641115 RTN1Q16799 776 aa23.15■■□□□ 1.3
PHGDH-210ENST00000641115 SHROOM1Q2M3G4 852 aaPredicted RBP23.15■■□□□ 1.3
PHGDH-210ENST00000641115 CPLX2Q6PUV4 134 aaKnown RBP23.15■■□□□ 1.3
PHGDH-210ENST00000641115 CDC37L1Q7L3B6 337 aa23.15■■□□□ 1.3
PHGDH-210ENST00000641115 FANCBQ8NB91 859 aa23.15■■□□□ 1.3
PHGDH-210ENST00000641115 CLIP2Q9UDT6 1046 aa23.15■■□□□ 1.3
PHGDH-210ENST00000641115 ASNSP08243 561 aa23.14■■□□□ 1.29
PHGDH-210ENST00000641115 GUCY1A2P33402 732 aa23.14■■□□□ 1.29
PHGDH-210ENST00000641115 ATP2B2Q01814 1243 aa23.14■■□□□ 1.29
PHGDH-210ENST00000641115 CTCFLQ8NI51 663 aaPredicted RBP23.14■■□□□ 1.29
PHGDH-210ENST00000641115 NYAP2Q9P242 653 aa23.14■■□□□ 1.29
PHGDH-210ENST00000641115 CDKL5O76039 1030 aa23.13■■□□□ 1.29
PHGDH-210ENST00000641115 NF2P35240 595 aa23.13■■□□□ 1.29
PHGDH-210ENST00000641115 USP48Q86UV5 1035 aa23.13■■□□□ 1.29
PHGDH-210ENST00000641115 ZNF526Q8TF50 670 aaPredicted RBP23.13■■□□□ 1.29
PHGDH-210ENST00000641115 GINM1Q9NU53 330 aa23.13■■□□□ 1.29
PHGDH-210ENST00000641115 CTNND1O60716 968 aaKnown RBP23.12■■□□□ 1.29
PHGDH-210ENST00000641115 EEF2P13639 858 aaKnown RBP23.12■■□□□ 1.29
PHGDH-210ENST00000641115 JAG1P78504 1218 aa23.12■■□□□ 1.29
PHGDH-210ENST00000641115 LRRC47Q8N1G4 583 aaKnown RBP23.12■■□□□ 1.29
PHGDH-210ENST00000641115 MAP3K14Q99558 947 aa23.12■■□□□ 1.29
PHGDH-210ENST00000641115 RBM28Q9NW13 759 aaKnown RBP23.12■■□□□ 1.29
PHGDH-210ENST00000641115 CDC27P30260 824 aa23.11■■□□□ 1.29
PHGDH-210ENST00000641115 KIF5BP33176 963 aa23.11■■□□□ 1.29
PHGDH-210ENST00000641115 NSUN7Q8NE18 718 aaKnown RBP23.11■■□□□ 1.29
PHGDH-210ENST00000641115 CDCA5Q96FF9 252 aa23.11■■□□□ 1.29
PHGDH-210ENST00000641115 WRNIP1Q96S55 665 aa23.11■■□□□ 1.29
PHGDH-210ENST00000641115 GLIS2Q9BZE0 524 aaPredicted RBP23.11■■□□□ 1.29
PHGDH-210ENST00000641115 ARHGEF10LQ9HCE6 1279 aa23.11■■□□□ 1.29
PHGDH-210ENST00000641115 PTPDC1A2A3K4 754 aa23.11■■□□□ 1.29
PHGDH-210ENST00000641115 GJB2P29033 226 aa23.11■■□□□ 1.29
PHGDH-210ENST00000641115 ADD1P35611 737 aaKnown RBP23.11■■□□□ 1.29
PHGDH-210ENST00000641115 HMGN5P82970 282 aaKnown RBP23.11■■□□□ 1.29
PHGDH-210ENST00000641115 NMRK2Q9NPI5 230 aa23.11■■□□□ 1.29
PHGDH-210ENST00000641115 ZNF112Q9UJU3 913 aa23.11■■□□□ 1.29
PHGDH-210ENST00000641115 MTMR7Q9Y216 660 aa23.11■■□□□ 1.29
PHGDH-210ENST00000641115 PPP1R12BO60237 982 aaPredicted RBP23.1■■□□□ 1.29
PHGDH-210ENST00000641115 CTDNEP1O95476 244 aa23.1■■□□□ 1.29
PHGDH-210ENST00000641115 POTEIP0CG38 1075 aa23.1■■□□□ 1.29
PHGDH-210ENST00000641115 POTEJP0CG39 1038 aa23.1■■□□□ 1.29
PHGDH-210ENST00000641115 LDHDQ86WU2 507 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms