RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 SLITRK4Q8IW52 837 aa9.16□□□□□ -0.94
RFC1-217ENST00000639695 LRRN4CLQ8ND94 238 aa9.16□□□□□ -0.94
RFC1-217ENST00000639695 MISP3Q96FF7 219 aa9.16□□□□□ -0.94
RFC1-217ENST00000639695 CRBNQ96SW2 442 aa9.16□□□□□ -0.94
RFC1-217ENST00000639695 TMEM39AQ9NV64 488 aa9.16□□□□□ -0.94
RFC1-217ENST00000639695 GPN3Q9UHW5 284 aaPredicted RBP9.16□□□□□ -0.94
RFC1-217ENST00000639695 ENC1O14682 589 aa9.15□□□□□ -0.94
RFC1-217ENST00000639695 ID3Q02535 119 aa9.15□□□□□ -0.94
RFC1-217ENST00000639695 TTLL4Q14679 1199 aa9.15□□□□□ -0.94
RFC1-217ENST00000639695 RNF187Q5TA31 235 aaPredicted RBP9.15□□□□□ -0.94
RFC1-217ENST00000639695 ATG4DQ86TL0 474 aaPredicted RBP9.15□□□□□ -0.94
RFC1-217ENST00000639695 SMYD4Q8IYR2 804 aaPredicted RBP9.15□□□□□ -0.94
RFC1-217ENST00000639695 FAM168AQ92567 244 aa9.15□□□□□ -0.94
RFC1-217ENST00000639695 PLAGL2Q9UPG8 496 aa9.15□□□□□ -0.94
RFC1-217ENST00000639695 BIN1O00499 593 aa9.14□□□□□ -0.95
RFC1-217ENST00000639695 NEFMP07197 916 aa9.14□□□□□ -0.95
RFC1-217ENST00000639695 HCLS1P14317 486 aaPredicted RBP9.14□□□□□ -0.95
RFC1-217ENST00000639695 TFE3P19532 575 aaPredicted RBP9.14□□□□□ -0.95
RFC1-217ENST00000639695 KIF4BQ2VIQ3 1234 aa9.14□□□□□ -0.95
RFC1-217ENST00000639695 SEZ6Q53EL9 994 aa9.14□□□□□ -0.95
RFC1-217ENST00000639695 MIR1-1HGQ9H1L0 117 aa9.14□□□□□ -0.95
RFC1-217ENST00000639695 PIDD1Q9HB75 910 aa9.14□□□□□ -0.95
RFC1-217ENST00000639695 MCM4P33991 863 aa9.13□□□□□ -0.95
RFC1-217ENST00000639695 OXCT1P55809 520 aa9.13□□□□□ -0.95
RFC1-217ENST00000639695 EIF6P56537 245 aaKnown RBP9.13□□□□□ -0.95
RFC1-217ENST00000639695 CHMP4BP1P59074 171 aa9.13□□□□□ -0.95
RFC1-217ENST00000639695 CWF19L2Q2TBE0 894 aaKnown RBP9.13□□□□□ -0.95
RFC1-217ENST00000639695 HNRNPLLQ8WVV9 542 aaKnown RBP9.13□□□□□ -0.95
RFC1-217ENST00000639695 DEPDC7Q96QD5 511 aa9.13□□□□□ -0.95
RFC1-217ENST00000639695 FERD3LQ96RJ6 166 aa9.13□□□□□ -0.95
RFC1-217ENST00000639695 DUSP23Q9BVJ7 150 aa9.13□□□□□ -0.95
RFC1-217ENST00000639695 ATXN3LQ9H3M9 355 aa9.13□□□□□ -0.95
RFC1-217ENST00000639695 GSTP1P09211 210 aaKnown RBP9.12□□□□□ -0.95
RFC1-217ENST00000639695 CRKP46108 304 aa9.12□□□□□ -0.95
RFC1-217ENST00000639695 ZNF165P49910 485 aa9.12□□□□□ -0.95
RFC1-217ENST00000639695 PRKCQQ04759 706 aa9.12□□□□□ -0.95
RFC1-217ENST00000639695 FBXW10Q5XX13 1052 aa9.12□□□□□ -0.95
RFC1-217ENST00000639695 SPOCD1Q6ZMY3 1216 aa9.12□□□□□ -0.95
RFC1-217ENST00000639695 ZCRB1Q8TBF4 217 aaKnown RBP9.12□□□□□ -0.95
RFC1-217ENST00000639695 STK35Q8TDR2 534 aa9.12□□□□□ -0.95
RFC1-217ENST00000639695 GATAD2BQ8WXI9 593 aa9.12□□□□□ -0.95
RFC1-217ENST00000639695 SNTG2Q9NY99 539 aa9.12□□□□□ -0.95
RFC1-217ENST00000639695 VAV3Q9UKW4 847 aa9.12□□□□□ -0.95
RFC1-217ENST00000639695 CYP8B1Q9UNU6 501 aa9.12□□□□□ -0.95
RFC1-217ENST00000639695 ENPP3O14638 875 aa9.11□□□□□ -0.95
RFC1-217ENST00000639695 SMAD7O15105 426 aaKnown RBP9.11□□□□□ -0.95
RFC1-217ENST00000639695 RNGTTO60942 597 aaKnown RBP9.11□□□□□ -0.95
RFC1-217ENST00000639695 IGBP1P78318 339 aa9.11□□□□□ -0.95
RFC1-217ENST00000639695 LRRC14Q15048 493 aa9.11□□□□□ -0.95
RFC1-217ENST00000639695 PTPROQ16827 1216 aa9.11□□□□□ -0.95
RFC1-217ENST00000639695 AOC3Q16853 763 aa9.11□□□□□ -0.95
RFC1-217ENST00000639695 PDZD3Q86UT5 571 aa9.11□□□□□ -0.95
RFC1-217ENST00000639695 OR6P1Q8NGX9 317 aa9.11□□□□□ -0.95
RFC1-217ENST00000639695 JARID2Q92833 1246 aaPredicted RBP9.11□□□□□ -0.95
RFC1-217ENST00000639695 SHDQ96IW2 340 aa9.11□□□□□ -0.95
RFC1-217ENST00000639695 LRRC3Q9BY71 257 aa9.11□□□□□ -0.95
RFC1-217ENST00000639695 PPT2Q9UMR5 302 aa9.11□□□□□ -0.95
RFC1-217ENST00000639695 hCG_2014768A0A024R1R8 64 aa9.1□□□□□ -0.95
RFC1-217ENST00000639695 CCDC85CA6NKD9 419 aa9.1□□□□□ -0.95
RFC1-217ENST00000639695 TLR3O15455 904 aaKnown RBP9.1□□□□□ -0.95
RFC1-217ENST00000639695 F13A1P00488 732 aa9.1□□□□□ -0.95
RFC1-217ENST00000639695 SLFN14P0C7P3 912 aa9.1□□□□□ -0.95
RFC1-217ENST00000639695 IMPDH2P12268 514 aa9.1□□□□□ -0.95
RFC1-217ENST00000639695 MPP2Q14168 576 aa9.1□□□□□ -0.95
RFC1-217ENST00000639695 IFI16Q16666 785 aaKnown RBP9.1□□□□□ -0.95
RFC1-217ENST00000639695 CCDC81Q6ZN84 652 aa9.1□□□□□ -0.95
RFC1-217ENST00000639695 PI4K2BQ8TCG2 481 aa9.1□□□□□ -0.95
RFC1-217ENST00000639695 RNPC3Q96LT9 517 aaKnown RBP9.1□□□□□ -0.95
RFC1-217ENST00000639695 CCDC113Q9H0I3 377 aa9.1□□□□□ -0.95
RFC1-217ENST00000639695 SLKQ9H2G2 1235 aaPredicted RBP9.1□□□□□ -0.95
RFC1-217ENST00000639695 PRDM7Q9NQW5 492 aa9.1□□□□□ -0.95
RFC1-217ENST00000639695 DBX1A6NMT0 343 aa9.09□□□□□ -0.95
RFC1-217ENST00000639695 PAGE1O75459 146 aa9.09□□□□□ -0.95
RFC1-217ENST00000639695 FARP2O94887 1054 aaPredicted RBP9.09□□□□□ -0.95
RFC1-217ENST00000639695 BPNT1O95861 308 aa9.09□□□□□ -0.95
RFC1-217ENST00000639695 CEACAM5P06731 702 aa9.09□□□□□ -0.95
RFC1-217ENST00000639695 IFRD2Q12894 506 aaPredicted RBP9.09□□□□□ -0.95
RFC1-217ENST00000639695 BNC2Q6ZN30 1099 aaPredicted RBP9.09□□□□□ -0.95
RFC1-217ENST00000639695 REXO1Q8N1G1 1221 aaKnown RBP9.09□□□□□ -0.95
RFC1-217ENST00000639695 ISL2Q96A47 359 aa9.09□□□□□ -0.95
RFC1-217ENST00000639695 TMX1Q9H3N1 280 aa9.09□□□□□ -0.95
RFC1-217ENST00000639695 PPP1R12AO14974 1030 aaPredicted RBP9.08□□□□□ -0.96
RFC1-217ENST00000639695 ITIH2P19823 946 aa9.08□□□□□ -0.96
RFC1-217ENST00000639695 NME2P22392 152 aa9.08□□□□□ -0.96
RFC1-217ENST00000639695 ANAPC15P60006 121 aa9.08□□□□□ -0.96
RFC1-217ENST00000639695 TOP6BLQ8N6T0 577 aa9.08□□□□□ -0.96
RFC1-217ENST00000639695 KCNB2Q92953 911 aa9.08□□□□□ -0.96
RFC1-217ENST00000639695 HRASLS5Q96KN8 279 aa9.08□□□□□ -0.96
RFC1-217ENST00000639695 HEXIM2Q96MH2 286 aaKnown RBP9.08□□□□□ -0.96
RFC1-217ENST00000639695 EMILIN2Q9BXX0 1053 aa9.08□□□□□ -0.96
RFC1-217ENST00000639695 KRTAP4-2Q9BYR5 136 aa9.08□□□□□ -0.96
RFC1-217ENST00000639695 KRT82Q9NSB4 513 aa9.08□□□□□ -0.96
RFC1-217ENST00000639695 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.08□□□□□ -0.96
RFC1-217ENST00000639695 GIPRP48546 466 aa9.07□□□□□ -0.96
RFC1-217ENST00000639695 MESP2Q0VG99 397 aa9.07□□□□□ -0.96
RFC1-217ENST00000639695 RASA3Q14644 834 aa9.07□□□□□ -0.96
RFC1-217ENST00000639695 FAM214BQ7L5A3 538 aa9.07□□□□□ -0.96
RFC1-217ENST00000639695 FBXO27Q8NI29 283 aa9.07□□□□□ -0.96
RFC1-217ENST00000639695 TMEM40Q8WWA1 233 aa9.07□□□□□ -0.96
RFC1-217ENST00000639695 BRINP2Q9C0B6 783 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms