RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 ZPR1O75312 459 aa12.03□□□□□ -0.48
KCNMA1-259ENST00000639406 TYW1BQ6NUM6 668 aa12.03□□□□□ -0.48
KCNMA1-259ENST00000639406 FAM173BQ6P4H8 233 aa12.03□□□□□ -0.48
KCNMA1-259ENST00000639406 TMTC2Q8N394 836 aa12.03□□□□□ -0.48
KCNMA1-259ENST00000639406 OLFM3Q96PB7 478 aa12.03□□□□□ -0.48
KCNMA1-259ENST00000639406 PLIN2Q99541 437 aa12.03□□□□□ -0.48
KCNMA1-259ENST00000639406 TUBB6Q9BUF5 446 aa12.03□□□□□ -0.48
KCNMA1-259ENST00000639406 KLC4Q9NSK0 619 aa12.03□□□□□ -0.48
KCNMA1-259ENST00000639406 CWF19L2Q2TBE0 894 aaKnown RBP12.03□□□□□ -0.48
KCNMA1-259ENST00000639406 ARMCX6Q7L4S7 300 aa12.03□□□□□ -0.48
KCNMA1-259ENST00000639406 TRMT1LQ7Z2T5 733 aaKnown RBP12.03□□□□□ -0.48
KCNMA1-259ENST00000639406 SDCCAG3Q96C92 435 aa12.03□□□□□ -0.48
KCNMA1-259ENST00000639406 CNOT10Q9H9A5 744 aaKnown RBP12.03□□□□□ -0.48
KCNMA1-259ENST00000639406 STK32BQ9NY57 414 aa12.03□□□□□ -0.48
KCNMA1-259ENST00000639406 CTNND1O60716 968 aaKnown RBP12.02□□□□□ -0.48
KCNMA1-259ENST00000639406 SNX1Q13596 522 aa12.02□□□□□ -0.48
KCNMA1-259ENST00000639406 RCN2Q14257 317 aa12.02□□□□□ -0.48
KCNMA1-259ENST00000639406 ZNF354CQ86Y25 554 aa12.02□□□□□ -0.48
KCNMA1-259ENST00000639406 KSR1Q8IVT5 923 aa12.02□□□□□ -0.48
KCNMA1-259ENST00000639406 CSGALNACT2Q8N6G5 542 aa12.02□□□□□ -0.48
KCNMA1-259ENST00000639406 PRPF38AQ8NAV1 312 aaKnown RBP12.02□□□□□ -0.48
KCNMA1-259ENST00000639406 UHMK1Q8TAS1 419 aaKnown RBP12.02□□□□□ -0.48
KCNMA1-259ENST00000639406 KCNV2Q8TDN2 545 aa12.02□□□□□ -0.48
KCNMA1-259ENST00000639406 INTUQ9ULD6 942 aa12.02□□□□□ -0.48
KCNMA1-259ENST00000639406 MSH2P43246 934 aa12.02□□□□□ -0.49
KCNMA1-259ENST00000639406 RRS1Q15050 365 aaKnown RBP12.02□□□□□ -0.49
KCNMA1-259ENST00000639406 KCNK3O14649 394 aa12.02□□□□□ -0.49
KCNMA1-259ENST00000639406 KRT75O95678 551 aa12.02□□□□□ -0.49
KCNMA1-259ENST00000639406 BRD1O95696 1058 aa12.02□□□□□ -0.49
KCNMA1-259ENST00000639406 CHMLP26374 656 aa12.02□□□□□ -0.49
KCNMA1-259ENST00000639406 OCA2Q04671 838 aa12.02□□□□□ -0.49
KCNMA1-259ENST00000639406 MYO1EQ12965 1108 aa12.02□□□□□ -0.49
KCNMA1-259ENST00000639406 ZNF280CQ8ND82 737 aa12.02□□□□□ -0.49
KCNMA1-259ENST00000639406 RRP36Q96EU6 259 aaKnown RBP12.02□□□□□ -0.49
KCNMA1-259ENST00000639406 NBPF3Q9H094 633 aa12.02□□□□□ -0.49
KCNMA1-259ENST00000639406 ABCB6Q9NP58 842 aa12.02□□□□□ -0.49
KCNMA1-259ENST00000639406 SPTLC3Q9NUV7 552 aa12.02□□□□□ -0.49
KCNMA1-259ENST00000639406 CHCHD3Q9NX63 227 aaKnown RBP12.02□□□□□ -0.49
KCNMA1-259ENST00000639406 CABP1Q9NZU7 370 aa12.02□□□□□ -0.49
KCNMA1-259ENST00000639406 CD2APQ9Y5K6 639 aa12.02□□□□□ -0.49
KCNMA1-259ENST00000639406 KDM2BQ8NHM5 1336 aa12.02□□□□□ -0.49
KCNMA1-259ENST00000639406 TRAF5O00463 557 aa12.02□□□□□ -0.49
KCNMA1-259ENST00000639406 DNAJC6O75061 913 aa12.02□□□□□ -0.49
KCNMA1-259ENST00000639406 KRT3P12035 628 aa12.02□□□□□ -0.49
KCNMA1-259ENST00000639406 TCP1P17987 556 aaKnown RBP12.02□□□□□ -0.49
KCNMA1-259ENST00000639406 NR1D1P20393 614 aa12.02□□□□□ -0.49
KCNMA1-259ENST00000639406 NXNQ6DKJ4 435 aa12.02□□□□□ -0.49
KCNMA1-259ENST00000639406 ZMYND10O75800 440 aa12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 GFM2Q969S9 779 aaKnown RBP12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 CCDC138Q96M89 665 aa12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 C8orf37Q96NL8 207 aa12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 ZKSCAN3Q9BRR0 538 aa12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 DISP3Q9P2K9 1392 aa12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 HFM1A2PYH4 1435 aa12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 NRBF2Q96F24 287 aa12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 BATF3Q9NR55 127 aa12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 PLB1Q6P1J6 1458 aa12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 TSPY2A6NKD2 308 aa12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 ACBD5Q5T8D3 534 aaPredicted RBP12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 CTAGE3PQ8IX95 158 aa12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 NCOA2Q15596 1464 aa12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 CPA1P15085 419 aa12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 PSMC1P62191 440 aaKnown RBP12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 PDE4DQ08499 809 aa12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 TRAF1Q13077 416 aa12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 SFMBT2Q5VUG0 894 aa12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 KRT79Q5XKE5 535 aa12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 ALS2CLQ60I27 953 aa12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 TMTC3Q6ZXV5 915 aa12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 GPIHBP1Q8IV16 184 aa12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 CDK19Q9BWU1 502 aa12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 HAUS4Q9H6D7 363 aa12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 SCHIP1Q9P0W5 487 aaPredicted RBP12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 MAPK8IP1Q9UQF2 711 aa12.01□□□□□ -0.49
KCNMA1-259ENST00000639406 VWA3AA6NCI4 1184 aa12□□□□□ -0.49
KCNMA1-259ENST00000639406 ECM2O94769 699 aaPredicted RBP12□□□□□ -0.49
KCNMA1-259ENST00000639406 TTC4O95801 387 aa12□□□□□ -0.49
KCNMA1-259ENST00000639406 IFIT1BQ5T764 474 aaKnown RBP12□□□□□ -0.49
KCNMA1-259ENST00000639406 DTHD1Q6ZMT9 781 aa12□□□□□ -0.49
KCNMA1-259ENST00000639406 HEATR3Q7Z4Q2 680 aa12□□□□□ -0.49
KCNMA1-259ENST00000639406 RSPH3Q86UC2 560 aa12□□□□□ -0.49
KCNMA1-259ENST00000639406 TRMT44Q8IYL2 757 aaKnown RBP12□□□□□ -0.49
KCNMA1-259ENST00000639406 ZNF513Q8N8E2 541 aaPredicted RBP12□□□□□ -0.49
KCNMA1-259ENST00000639406 CNNM2Q9H8M5 875 aa12□□□□□ -0.49
KCNMA1-259ENST00000639406 ARHGAP5Q13017 1502 aa12□□□□□ -0.49
KCNMA1-259ENST00000639406 POLR2DO15514 142 aaKnown RBP12□□□□□ -0.49
KCNMA1-259ENST00000639406 THAP12O43422 761 aa12□□□□□ -0.49
KCNMA1-259ENST00000639406 CUTAO60888 179 aa12□□□□□ -0.49
KCNMA1-259ENST00000639406 PHBP35232 272 aa12□□□□□ -0.49
KCNMA1-259ENST00000639406 TMED10P49755 219 aaKnown RBP12□□□□□ -0.49
KCNMA1-259ENST00000639406 CHST3Q7LGC8 479 aa12□□□□□ -0.49
KCNMA1-259ENST00000639406 MAIP1Q8WWC4 291 aa12□□□□□ -0.49
KCNMA1-259ENST00000639406 CEP19Q96LK0 163 aa12□□□□□ -0.49
KCNMA1-259ENST00000639406 UIMC1Q96RL1 719 aa12□□□□□ -0.49
KCNMA1-259ENST00000639406 MIS12Q9H081 205 aa12□□□□□ -0.49
KCNMA1-259ENST00000639406 AMFRQ9UKV5 643 aa12□□□□□ -0.49
KCNMA1-259ENST00000639406 MCF2LO15068 1137 aa12□□□□□ -0.49
KCNMA1-259ENST00000639406 EEF1B2P24534 225 aaKnown RBP12□□□□□ -0.49
KCNMA1-259ENST00000639406 CAVIN4Q5BKX8 364 aa12□□□□□ -0.49
KCNMA1-259ENST00000639406 SLC35F6Q8N357 371 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms