RNA–Protein interactions for RNA: ENST00000636881.1

CHD2-226, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 3,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-226ENST00000636881 PPFIA1Q13136 1202 aa9.61□□□□□ -0.87
CHD2-226ENST00000636881 TRIM14Q14142 442 aa9.61□□□□□ -0.87
CHD2-226ENST00000636881 CDKAL1Q5VV42 579 aa9.61□□□□□ -0.87
CHD2-226ENST00000636881 LMOD2Q6P5Q4 547 aa9.61□□□□□ -0.87
CHD2-226ENST00000636881 USP49Q70CQ1 688 aa9.61□□□□□ -0.87
CHD2-226ENST00000636881 TRAPPC11Q7Z392 1133 aa9.61□□□□□ -0.87
CHD2-226ENST00000636881 TMEM87BQ96K49 555 aa9.61□□□□□ -0.87
CHD2-226ENST00000636881 SELENOOQ9BVL4 669 aa9.61□□□□□ -0.87
CHD2-226ENST00000636881 TRIM10Q9UDY6 481 aa9.61□□□□□ -0.87
CHD2-226ENST00000636881 EPN1Q9Y6I3 576 aaPredicted RBP9.61□□□□□ -0.87
CHD2-226ENST00000636881 SRGAP2O75044 1071 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 COBLO75128 1261 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 CASP1P29466 404 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 ZAP70P43403 619 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 TOB1P50616 345 aaPredicted RBP9.6□□□□□ -0.87
CHD2-226ENST00000636881 CASP7P55210 303 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 GNGT1P63211 74 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 FBXW10Q5XX13 1052 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 KIAA1328Q86T90 577 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 TBC1D10CQ8IV04 446 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 ZNF579Q8NAF0 562 aaKnown RBP9.6□□□□□ -0.87
CHD2-226ENST00000636881 RPGRIP1Q96KN7 1286 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 PUS3Q9BZE2 481 aaKnown RBP9.6□□□□□ -0.87
CHD2-226ENST00000636881 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.6□□□□□ -0.877e-8■□□□□ 11.3
CHD2-226ENST00000636881 HAUS4Q9H6D7 363 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 SLC52A2Q9HAB3 445 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 TAB2Q9NYJ8 693 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 SRPRBQ9Y5M8 271 aaKnown RBP9.6□□□□□ -0.87
CHD2-226ENST00000636881 USP54Q70EL1 1684 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 SPEF2Q9C093 1822 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 TARSL2A2RTX5 802 aaKnown RBP9.6□□□□□ -0.87
CHD2-226ENST00000636881 PES1O00541 588 aaKnown RBP9.6□□□□□ -0.87
CHD2-226ENST00000636881 MMP1P03956 469 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 ADORA1P30542 326 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 HNRNPH1P31943 449 aaKnown RBP9.6□□□□□ -0.87
CHD2-226ENST00000636881 CUL4BQ13620 913 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 KRT31Q15323 416 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 CCDC122Q5T0U0 273 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 CCDC82Q8N4S0 544 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 PLBD2Q8NHP8 589 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 KAT2BQ92831 832 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 RUFY1Q96T51 708 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 CXorf56Q9H5V9 222 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 C5P01031 1676 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 IFIT3O14879 490 aaKnown RBP9.6□□□□□ -0.87
CHD2-226ENST00000636881 KIAA0754O94854 1291 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 NDUFA10O95299 355 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 ATP1A1P05023 1023 aaKnown RBP9.6□□□□□ -0.87
CHD2-226ENST00000636881 COPB1P53618 953 aaKnown RBP9.6□□□□□ -0.87
CHD2-226ENST00000636881 SPAG1Q07617 926 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 NTRK3Q16288 839 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 XAGE2Q96GT9 111 aa9.6□□□□□ -0.87
CHD2-226ENST00000636881 CWC25Q9NXE8 425 aaPredicted RBP9.6□□□□□ -0.87
CHD2-226ENST00000636881 SHOX2O60902 331 aaPredicted RBP9.59□□□□□ -0.87
CHD2-226ENST00000636881 FMNL1O95466 1100 aaPredicted RBP9.59□□□□□ -0.87
CHD2-226ENST00000636881 FECHP22830 423 aa9.59□□□□□ -0.87
CHD2-226ENST00000636881 RRAGBQ5VZM2 374 aa9.59□□□□□ -0.87
CHD2-226ENST00000636881 IQCEQ6IPM2 695 aa9.59□□□□□ -0.87
CHD2-226ENST00000636881 CHP1Q99653 195 aa9.59□□□□□ -0.87
CHD2-226ENST00000636881 STK36Q9NRP7 1315 aa9.59□□□□□ -0.87
CHD2-226ENST00000636881 H7C1W4 665 aa9.59□□□□□ -0.87
CHD2-226ENST00000636881 ATP6V1AP38606 617 aa9.59□□□□□ -0.87
CHD2-226ENST00000636881 NR5A1Q13285 461 aa9.59□□□□□ -0.87
CHD2-226ENST00000636881 SND1Q7KZF4 910 aaKnown RBP eCLIP9.59□□□□□ -0.87
CHD2-226ENST00000636881 SPATA20Q8TB22 786 aa9.59□□□□□ -0.87
CHD2-226ENST00000636881 JAKMIP2Q96AA8 810 aa9.59□□□□□ -0.87
CHD2-226ENST00000636881 CABP5Q9NP86 173 aa9.59□□□□□ -0.87
CHD2-226ENST00000636881 GNL3LQ9NVN8 582 aaKnown RBP9.59□□□□□ -0.87
CHD2-226ENST00000636881 SAMM50Q9Y512 469 aa9.59□□□□□ -0.87
CHD2-226ENST00000636881 CAPN7Q9Y6W3 813 aa9.59□□□□□ -0.87
CHD2-226ENST00000636881 ECM29Q5VYK3 1845 aa9.59□□□□□ -0.87
CHD2-226ENST00000636881 PSMD14O00487 310 aa9.59□□□□□ -0.88
CHD2-226ENST00000636881 IPO7O95373 1038 aaKnown RBP9.59□□□□□ -0.88
CHD2-226ENST00000636881 TTC19Q6DKK2 380 aaPredicted RBP9.59□□□□□ -0.88
CHD2-226ENST00000636881 CCNI2Q6ZMN8 369 aaPredicted RBP9.59□□□□□ -0.88
CHD2-226ENST00000636881 GBP6Q6ZN66 633 aa9.59□□□□□ -0.88
CHD2-226ENST00000636881 EHBP1Q8NDI1 1231 aa9.59□□□□□ -0.88
CHD2-226ENST00000636881 RAPGEF4Q8WZA2 1011 aa9.59□□□□□ -0.88
CHD2-226ENST00000636881 PAGE5Q96GU1 130 aa9.59□□□□□ -0.88
CHD2-226ENST00000636881 NBPF3Q9H094 633 aa9.59□□□□□ -0.88
CHD2-226ENST00000636881 EHD4Q9H223 541 aa9.59□□□□□ -0.88
CHD2-226ENST00000636881 FOXP1Q9H334 677 aaPredicted RBP9.59□□□□□ -0.88
CHD2-226ENST00000636881 NFAT5O94916 1531 aa9.58□□□□□ -0.88
CHD2-226ENST00000636881 EIF3HO15372 352 aaKnown RBP eCLIP9.58□□□□□ -0.884e-6■■□□□ 13
CHD2-226ENST00000636881 OPA1O60313 960 aa9.58□□□□□ -0.88
CHD2-226ENST00000636881 GUCY1A2P33402 732 aa9.58□□□□□ -0.88
CHD2-226ENST00000636881 UBXN1Q04323 297 aa9.58□□□□□ -0.88
CHD2-226ENST00000636881 SCARF1Q14162 830 aa9.58□□□□□ -0.88
CHD2-226ENST00000636881 ANKRD18AQ8IVF6 992 aa9.58□□□□□ -0.88
CHD2-226ENST00000636881 STAMQ92783 540 aa9.58□□□□□ -0.88
CHD2-226ENST00000636881 GSDMAQ96QA5 445 aa9.58□□□□□ -0.88
CHD2-226ENST00000636881 SIPA1L3O60292 1781 aaPredicted RBP9.58□□□□□ -0.88
CHD2-226ENST00000636881 WDR17Q8IZU2 1322 aa9.58□□□□□ -0.88
CHD2-226ENST00000636881 ZC3H4Q9UPT8 1303 aaKnown RBP9.58□□□□□ -0.88
CHD2-226ENST00000636881 PPP1R3GB7ZBB8 358 aa9.58□□□□□ -0.88
CHD2-226ENST00000636881 GOLGA8KD6RF30 607 aa9.58□□□□□ -0.88
CHD2-226ENST00000636881 RNF225M0QZC1 329 aaPredicted RBP9.58□□□□□ -0.88
CHD2-226ENST00000636881 KRT86O43790 486 aa9.58□□□□□ -0.88
CHD2-226ENST00000636881 CIAO1O76071 339 aa9.58□□□□□ -0.88
CHD2-226ENST00000636881 C2orf54Q08AI8 447 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms