RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 USP17L24Q0WX57 530 aa13.03□□□□□ -0.32
SSBP4-215ENST00000625926 SEPT2Q15019 361 aa13.03□□□□□ -0.32
SSBP4-215ENST00000625926 LRRFIP1Q32MZ4 808 aaKnown RBP13.03□□□□□ -0.32
SSBP4-215ENST00000625926 NKX2-3Q8TAU0 364 aa13.03□□□□□ -0.32
SSBP4-215ENST00000625926 GCC1Q96CN9 775 aa13.03□□□□□ -0.32
SSBP4-215ENST00000625926 RBPJLQ9UBG7 517 aa13.03□□□□□ -0.32
SSBP4-215ENST00000625926 ZBTB47Q9UFB7 747 aaPredicted RBP13.03□□□□□ -0.32
SSBP4-215ENST00000625926 SZT2Q5T011 3432 aa13.02□□□□□ -0.32
SSBP4-215ENST00000625926 CCL5P13501 91 aa13.02□□□□□ -0.33
SSBP4-215ENST00000625926 HABP4Q5JVS0 413 aaKnown RBP13.02□□□□□ -0.33
SSBP4-215ENST00000625926 CTR9Q6PD62 1173 aa13.02□□□□□ -0.33
SSBP4-215ENST00000625926 CATSPERGQ6ZRH7 1159 aa13.02□□□□□ -0.33
SSBP4-215ENST00000625926 TMEM179Q6ZVK1 233 aa13.02□□□□□ -0.33
SSBP4-215ENST00000625926 CCAR1Q8IX12 1150 aaKnown RBP13.02□□□□□ -0.33
SSBP4-215ENST00000625926 SLC44A5Q8NCS7 719 aa13.02□□□□□ -0.33
SSBP4-215ENST00000625926 APPBP2Q92624 585 aa13.02□□□□□ -0.33
SSBP4-215ENST00000625926 CCDC17Q96LX7 622 aa13.02□□□□□ -0.33
SSBP4-215ENST00000625926 STRBPQ96SI9 672 aaKnown RBP13.02□□□□□ -0.33
SSBP4-215ENST00000625926 RNF208Q9H0X6 261 aa13.02□□□□□ -0.33
SSBP4-215ENST00000625926 TXNRD2Q9NNW7 524 aa13.02□□□□□ -0.33
SSBP4-215ENST00000625926 CYP2D7A0A087X1C5 515 aa13.01□□□□□ -0.33
SSBP4-215ENST00000625926 GLRX3O76003 335 aaKnown RBP13.01□□□□□ -0.33
SSBP4-215ENST00000625926 GJB1P08034 283 aa13.01□□□□□ -0.33
SSBP4-215ENST00000625926 ELNP15502 786 aa13.01□□□□□ -0.33
SSBP4-215ENST00000625926 VCAM1P19320 739 aa13.01□□□□□ -0.33
SSBP4-215ENST00000625926 MAPK4P31152 587 aa13.01□□□□□ -0.33
SSBP4-215ENST00000625926 CDK8P49336 464 aa13.01□□□□□ -0.33
SSBP4-215ENST00000625926 AAMPQ13685 434 aa13.01□□□□□ -0.33
SSBP4-215ENST00000625926 Q3C1V9 767 aa13.01□□□□□ -0.33
SSBP4-215ENST00000625926 ANKRD45Q5TZF3 282 aa13.01□□□□□ -0.33
SSBP4-215ENST00000625926 OSBP2Q969R2 916 aa13.01□□□□□ -0.33
SSBP4-215ENST00000625926 PAGR1Q9BTK6 254 aa13.01□□□□□ -0.33
SSBP4-215ENST00000625926 ARPP21Q9UBL0 812 aaPredicted RBP13.01□□□□□ -0.33
SSBP4-215ENST00000625926 GJD2Q9UKL4 321 aa13.01□□□□□ -0.33
SSBP4-215ENST00000625926 DOCK1Q14185 1865 aa13.01□□□□□ -0.33
SSBP4-215ENST00000625926 AK9Q5TCS8 1911 aa13.01□□□□□ -0.33
SSBP4-215ENST00000625926 MKI67P46013 3256 aaKnown RBP13□□□□□ -0.33
SSBP4-215ENST00000625926 A0A1W2PRG0 241 aa13□□□□□ -0.33
SSBP4-215ENST00000625926 PEX10O60683 326 aa13□□□□□ -0.33
SSBP4-215ENST00000625926 INHAP05111 366 aa13□□□□□ -0.33
SSBP4-215ENST00000625926 AKR1B1P15121 316 aa13□□□□□ -0.33
SSBP4-215ENST00000625926 GNAT2P19087 354 aa13□□□□□ -0.33
SSBP4-215ENST00000625926 MX1P20591 662 aa13□□□□□ -0.33
SSBP4-215ENST00000625926 GJA8P48165 433 aa13□□□□□ -0.33
SSBP4-215ENST00000625926 ERVK-9P63128 1117 aa13□□□□□ -0.33
SSBP4-215ENST00000625926 ERVK-24P63145 666 aa13□□□□□ -0.33
SSBP4-215ENST00000625926 HDAC1Q13547 482 aaPredicted RBP13□□□□□ -0.33
SSBP4-215ENST00000625926 GIMAP6Q6P9H5 292 aa13□□□□□ -0.33
SSBP4-215ENST00000625926 C16orf86Q6ZW13 317 aa13□□□□□ -0.33
SSBP4-215ENST00000625926 PI4K2BQ8TCG2 481 aa13□□□□□ -0.33
SSBP4-215ENST00000625926 OTUD7AQ8TE49 926 aaPredicted RBP13□□□□□ -0.33
SSBP4-215ENST00000625926 RPAP3Q9H6T3 665 aaPredicted RBP13□□□□□ -0.33
SSBP4-215ENST00000625926 RABGAP1Q9Y3P9 1069 aa13□□□□□ -0.33
SSBP4-215ENST00000625926 GSG1L2A8MUP6 293 aa12.99□□□□□ -0.33
SSBP4-215ENST00000625926 SMIM22K7EJ46 135 aa12.99□□□□□ -0.33
SSBP4-215ENST00000625926 CCNA1P78396 465 aa12.99□□□□□ -0.33
SSBP4-215ENST00000625926 ICA1Q05084 483 aa12.99□□□□□ -0.33
SSBP4-215ENST00000625926 SBK1Q52WX2 424 aa12.99□□□□□ -0.33
SSBP4-215ENST00000625926 POTEEQ6S8J3 1075 aa12.99□□□□□ -0.33
SSBP4-215ENST00000625926 LBX2Q6XYB7 198 aa12.99□□□□□ -0.33
SSBP4-215ENST00000625926 U2AF1L4Q8WU68 220 aaKnown RBP12.99□□□□□ -0.33
SSBP4-215ENST00000625926 SOCS4Q8WXH5 440 aa12.99□□□□□ -0.33
SSBP4-215ENST00000625926 NUDT12Q9BQG2 462 aa12.99□□□□□ -0.33
SSBP4-215ENST00000625926 FSD1Q9BTV5 496 aa12.99□□□□□ -0.33
SSBP4-215ENST00000625926 UNC93B1Q9H1C4 597 aa12.99□□□□□ -0.33
SSBP4-215ENST00000625926 SH2D4AQ9H788 454 aa12.99□□□□□ -0.33
SSBP4-215ENST00000625926 ARHGEF10LQ9HCE6 1279 aa12.99□□□□□ -0.33
SSBP4-215ENST00000625926 PATL2C9JE40 543 aaKnown RBP12.98□□□□□ -0.33
SSBP4-215ENST00000625926 GPAA1O43292 621 aa12.98□□□□□ -0.33
SSBP4-215ENST00000625926 SGPL1O95470 568 aa12.98□□□□□ -0.33
SSBP4-215ENST00000625926 HMGCRP04035 888 aa12.98□□□□□ -0.33
SSBP4-215ENST00000625926 APPP05067 770 aa12.98□□□□□ -0.33
SSBP4-215ENST00000625926 CAPN2P17655 700 aa12.98□□□□□ -0.33
SSBP4-215ENST00000625926 CYP2B6P20813 491 aa12.98□□□□□ -0.33
SSBP4-215ENST00000625926 COG2Q14746 738 aa12.98□□□□□ -0.33
SSBP4-215ENST00000625926 SIAH1Q8IUQ4 282 aa12.98□□□□□ -0.33
SSBP4-215ENST00000625926 LPAR1Q92633 364 aa12.98□□□□□ -0.33
SSBP4-215ENST00000625926 SHISA4Q96DD7 197 aa12.98□□□□□ -0.33
SSBP4-215ENST00000625926 PORCNQ9H237 461 aa12.98□□□□□ -0.33
SSBP4-215ENST00000625926 KANSL2Q9H9L4 492 aa12.98□□□□□ -0.33
SSBP4-215ENST00000625926 CWC22Q9HCG8 908 aaKnown RBP12.98□□□□□ -0.33
SSBP4-215ENST00000625926 HOXC10Q9NYD6 342 aa12.98□□□□□ -0.33
SSBP4-215ENST00000625926 TMX2Q9Y320 296 aa12.98□□□□□ -0.33
SSBP4-215ENST00000625926 MINDY4BA8MYZ0 360 aa12.97□□□□□ -0.33
SSBP4-215ENST00000625926 M0R2C6 588 aa12.97□□□□□ -0.33
SSBP4-215ENST00000625926 CNMDO75829 334 aa12.97□□□□□ -0.33
SSBP4-215ENST00000625926 XRCC5P13010 732 aaKnown RBP12.97□□□□□ -0.33
SSBP4-215ENST00000625926 TDO2P48775 406 aa12.97□□□□□ -0.33
SSBP4-215ENST00000625926 GPR142Q7Z601 462 aa12.97□□□□□ -0.33
SSBP4-215ENST00000625926 PLEKHH3Q7Z736 793 aa12.97□□□□□ -0.33
SSBP4-215ENST00000625926 DEFB118Q96PH6 123 aa12.97□□□□□ -0.33
SSBP4-215ENST00000625926 TANGO6Q9C0B7 1094 aa12.97□□□□□ -0.33
SSBP4-215ENST00000625926 RWDD1Q9H446 243 aaPredicted RBP12.97□□□□□ -0.33
SSBP4-215ENST00000625926 MKNK2Q9HBH9 465 aa12.97□□□□□ -0.33
SSBP4-215ENST00000625926 SIPA1L1O43166 1804 aa12.97□□□□□ -0.33
SSBP4-215ENST00000625926 SALL3Q9BXA9 1300 aa12.96□□□□□ -0.33
SSBP4-215ENST00000625926 SPDYE16A6NNV3 312 aaPredicted RBP12.96□□□□□ -0.33
SSBP4-215ENST00000625926 TFRCP02786 760 aaKnown RBP12.96□□□□□ -0.33
SSBP4-215ENST00000625926 EEF2P13639 858 aaKnown RBP12.96□□□□□ -0.33
SSBP4-215ENST00000625926 RGS2P41220 211 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms