RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 MPHOSPH10O00566 681 aaKnown RBP20.67■□□□□ 0.9
HMGN3-203ENST00000620514 CCL5P13501 91 aa20.67■□□□□ 0.9
HMGN3-203ENST00000620514 IRF5Q13568 498 aa20.67■□□□□ 0.9
HMGN3-203ENST00000620514 KIAA1683Q9H0B3 1180 aa20.67■□□□□ 0.9
HMGN3-203ENST00000620514 RBPJLQ9UBG7 517 aa20.67■□□□□ 0.9
HMGN3-203ENST00000620514 USP17L12C9JPN9 530 aa20.66■□□□□ 0.9
HMGN3-203ENST00000620514 USP17L21D6R901 530 aa20.66■□□□□ 0.9
HMGN3-203ENST00000620514 USP14P54578 494 aa20.66■□□□□ 0.9
HMGN3-203ENST00000620514 UBXN2AP68543 259 aa20.66■□□□□ 0.9
HMGN3-203ENST00000620514 Q3C1V9 767 aa20.66■□□□□ 0.9
HMGN3-203ENST00000620514 C12orf60Q5U649 245 aa20.66■□□□□ 0.9
HMGN3-203ENST00000620514 PRPF38BQ5VTL8 546 aaKnown RBP20.66■□□□□ 0.9
HMGN3-203ENST00000620514 SHISA4Q96DD7 197 aa20.66■□□□□ 0.9
HMGN3-203ENST00000620514 A0A1W2PRG0 241 aa20.65■□□□□ 0.9
HMGN3-203ENST00000620514 AKR1B1P15121 316 aa20.65■□□□□ 0.9
HMGN3-203ENST00000620514 VCAM1P19320 739 aa20.65■□□□□ 0.9
HMGN3-203ENST00000620514 GPRC5AQ8NFJ5 357 aa20.65■□□□□ 0.9
HMGN3-203ENST00000620514 PXYLP1Q8TE99 480 aa20.65■□□□□ 0.9
HMGN3-203ENST00000620514 OSBP2Q969R2 916 aa20.65■□□□□ 0.9
HMGN3-203ENST00000620514 STRBPQ96SI9 672 aaKnown RBP20.65■□□□□ 0.9
HMGN3-203ENST00000620514 PAGR1Q9BTK6 254 aa20.65■□□□□ 0.9
HMGN3-203ENST00000620514 RNF208Q9H0X6 261 aa20.65■□□□□ 0.9
HMGN3-203ENST00000620514 UNC93B1Q9H1C4 597 aa20.65■□□□□ 0.9
HMGN3-203ENST00000620514 SWAP70Q9UH65 585 aa20.65■□□□□ 0.9
HMGN3-203ENST00000620514 GJD2Q9UKL4 321 aa20.65■□□□□ 0.9
HMGN3-203ENST00000620514 USP17L15C9J2P7 530 aa20.64■□□□□ 0.89
HMGN3-203ENST00000620514 USP17L13C9JLJ4 530 aa20.64■□□□□ 0.89
HMGN3-203ENST00000620514 USP17L11C9JVI0 530 aa20.64■□□□□ 0.89
HMGN3-203ENST00000620514 USP17L18D6R9N7 530 aa20.64■□□□□ 0.89
HMGN3-203ENST00000620514 USP17L22D6RA61 530 aa20.64■□□□□ 0.89
HMGN3-203ENST00000620514 USP17L17D6RBQ6 530 aa20.64■□□□□ 0.89
HMGN3-203ENST00000620514 USP17L19D6RCP7 530 aa20.64■□□□□ 0.89
HMGN3-203ENST00000620514 USP17L20D6RJB6 530 aa20.64■□□□□ 0.89
HMGN3-203ENST00000620514 RNF113AO15541 343 aaKnown RBP20.64■□□□□ 0.89
HMGN3-203ENST00000620514 INHAP05111 366 aa20.64■□□□□ 0.89
HMGN3-203ENST00000620514 USP17L24Q0WX57 530 aa20.64■□□□□ 0.89
HMGN3-203ENST00000620514 CTR9Q6PD62 1173 aa20.64■□□□□ 0.89
HMGN3-203ENST00000620514 CATSPERGQ6ZRH7 1159 aa20.64■□□□□ 0.89
HMGN3-203ENST00000620514 CLEC10AQ8IUN9 316 aa20.64■□□□□ 0.89
HMGN3-203ENST00000620514 PIAS4Q8N2W9 510 aaPredicted RBP20.64■□□□□ 0.89
HMGN3-203ENST00000620514 PI4K2BQ8TCG2 481 aa20.64■□□□□ 0.89
HMGN3-203ENST00000620514 TTC41PQ6P2S7 1318 aa20.63■□□□□ 0.89
HMGN3-203ENST00000620514 CDK8P49336 464 aa20.63■□□□□ 0.89
HMGN3-203ENST00000620514 ERVK-9P63128 1117 aa20.63■□□□□ 0.89
HMGN3-203ENST00000620514 ERVK-24P63145 666 aa20.63■□□□□ 0.89
HMGN3-203ENST00000620514 TMEM179Q6ZVK1 233 aa20.63■□□□□ 0.89
HMGN3-203ENST00000620514 APPBP2Q92624 585 aa20.63■□□□□ 0.89
HMGN3-203ENST00000620514 DDRGK1Q96HY6 314 aa20.63■□□□□ 0.89
HMGN3-203ENST00000620514 MKI67P46013 3256 aaKnown RBP20.62■□□□□ 0.89
HMGN3-203ENST00000620514 CNMDO75829 334 aa20.62■□□□□ 0.89
HMGN3-203ENST00000620514 GJB1P08034 283 aa20.62■□□□□ 0.89
HMGN3-203ENST00000620514 C16orf86Q6ZW13 317 aa20.62■□□□□ 0.89
HMGN3-203ENST00000620514 SIAH1Q8IUQ4 282 aa20.62■□□□□ 0.89
HMGN3-203ENST00000620514 AMOTL1Q8IY63 956 aa20.62■□□□□ 0.89
HMGN3-203ENST00000620514 GTF3C2Q8WUA4 911 aaPredicted RBP20.62■□□□□ 0.89
HMGN3-203ENST00000620514 PORCNQ9H237 461 aa20.62■□□□□ 0.89
HMGN3-203ENST00000620514 RPAP3Q9H6T3 665 aaPredicted RBP20.62■□□□□ 0.89
HMGN3-203ENST00000620514 PLXNB2O15031 1838 aa20.62■□□□□ 0.89
HMGN3-203ENST00000620514 MYH8P13535 1937 aa20.61■□□□□ 0.89
HMGN3-203ENST00000620514 GSG1L2A8MUP6 293 aa20.61■□□□□ 0.89
HMGN3-203ENST00000620514 M0R2C6 588 aa20.61■□□□□ 0.89
HMGN3-203ENST00000620514 GJA8P48165 433 aa20.61■□□□□ 0.89
HMGN3-203ENST00000620514 KIAA1755Q5JYT7 1200 aa20.61■□□□□ 0.89
HMGN3-203ENST00000620514 ANKRD45Q5TZF3 282 aa20.61■□□□□ 0.89
HMGN3-203ENST00000620514 SALL3Q9BXA9 1300 aa20.6■□□□□ 0.89
HMGN3-203ENST00000620514 ERC2O15083 957 aa20.6■□□□□ 0.89
HMGN3-203ENST00000620514 GLRX3O76003 335 aaKnown RBP20.6■□□□□ 0.89
HMGN3-203ENST00000620514 MX1P20591 662 aa20.6■□□□□ 0.89
HMGN3-203ENST00000620514 RABGAP1Q9Y3P9 1069 aa20.6■□□□□ 0.89
HMGN3-203ENST00000620514 SPDYE16A6NNV3 312 aaPredicted RBP20.59■□□□□ 0.89
HMGN3-203ENST00000620514 GPAA1O43292 621 aa20.59■□□□□ 0.89
HMGN3-203ENST00000620514 ZFYP08048 801 aaPredicted RBP20.59■□□□□ 0.89
HMGN3-203ENST00000620514 CYP2B6P20813 491 aa20.59■□□□□ 0.89
HMGN3-203ENST00000620514 ICA1Q05084 483 aa20.59■□□□□ 0.89
HMGN3-203ENST00000620514 TRIM32Q13049 653 aa20.59■□□□□ 0.89
HMGN3-203ENST00000620514 HDAC1Q13547 482 aaPredicted RBP20.59■□□□□ 0.89
HMGN3-203ENST00000620514 STK11IPQ8N1F8 1099 aa20.59■□□□□ 0.89
HMGN3-203ENST00000620514 NKX2-3Q8TAU0 364 aa20.59■□□□□ 0.89
HMGN3-203ENST00000620514 U2AF1L4Q8WU68 220 aaKnown RBP20.59■□□□□ 0.89
HMGN3-203ENST00000620514 CCDC17Q96LX7 622 aa20.59■□□□□ 0.89
HMGN3-203ENST00000620514 SEC62Q99442 399 aaKnown RBP20.59■□□□□ 0.89
HMGN3-203ENST00000620514 EPB41L4AQ9HCS5 686 aaPredicted RBP20.59■□□□□ 0.89
HMGN3-203ENST00000620514 ARPP21Q9UBL0 812 aaPredicted RBP20.59■□□□□ 0.89
HMGN3-203ENST00000620514 MAPK4P31152 587 aa20.58■□□□□ 0.89
HMGN3-203ENST00000620514 SBK1Q52WX2 424 aa20.58■□□□□ 0.89
HMGN3-203ENST00000620514 GPR142Q7Z601 462 aa20.58■□□□□ 0.89
HMGN3-203ENST00000620514 FSD1Q9BTV5 496 aa20.58■□□□□ 0.89
HMGN3-203ENST00000620514 BTBD7Q9P203 1132 aa20.58■□□□□ 0.89
HMGN3-203ENST00000620514 MINDY4BA8MYZ0 360 aa20.57■□□□□ 0.88
HMGN3-203ENST00000620514 SGPL1O95470 568 aa20.57■□□□□ 0.88
HMGN3-203ENST00000620514 HMGCRP04035 888 aa20.57■□□□□ 0.88
HMGN3-203ENST00000620514 PLEKHH3Q7Z736 793 aa20.57■□□□□ 0.88
HMGN3-203ENST00000620514 CCAR1Q8IX12 1150 aaKnown RBP20.57■□□□□ 0.88
HMGN3-203ENST00000620514 TRIB2Q92519 343 aa20.57■□□□□ 0.88
HMGN3-203ENST00000620514 DEFB118Q96PH6 123 aa20.57■□□□□ 0.88
HMGN3-203ENST00000620514 NUDT12Q9BQG2 462 aa20.57■□□□□ 0.88
HMGN3-203ENST00000620514 ARHGEF10LQ9HCE6 1279 aa20.57■□□□□ 0.88
HMGN3-203ENST00000620514 TMX2Q9Y320 296 aa20.57■□□□□ 0.88
HMGN3-203ENST00000620514 GIMAP6Q6P9H5 292 aa20.56■□□□□ 0.88
HMGN3-203ENST00000620514 LBX2Q6XYB7 198 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms