RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 TBC1D2Q9BYX2 928 aa8.81□□□□□ -1
VPS45-213ENST00000618148 SSC5DA1L4H1 1573 aa8.81□□□□□ -1
VPS45-213ENST00000618148 SH2B2O14492 632 aaPredicted RBP8.81□□□□□ -1
VPS45-213ENST00000618148 PRDM1O75626 825 aa8.81□□□□□ -1
VPS45-213ENST00000618148 SEC23AQ15436 765 aa8.81□□□□□ -1
VPS45-213ENST00000618148 NEDD1Q8NHV4 660 aa8.81□□□□□ -1
VPS45-213ENST00000618148 ANKS1AQ92625 1134 aa8.81□□□□□ -1
VPS45-213ENST00000618148 CCDC17Q96LX7 622 aa8.81□□□□□ -1
VPS45-213ENST00000618148 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.81□□□□□ -1
VPS45-213ENST00000618148 ANGEL1Q9UNK9 670 aaKnown RBP8.81□□□□□ -1
VPS45-213ENST00000618148 NID2Q14112 1375 aa8.8□□□□□ -1
VPS45-213ENST00000618148 K7ELQ4 463 aaPredicted RBP8.8□□□□□ -1
VPS45-213ENST00000618148 VASPP50552 380 aaPredicted RBP8.8□□□□□ -1
VPS45-213ENST00000618148 RCAN1P53805 252 aa8.8□□□□□ -1
VPS45-213ENST00000618148 SLC4A8Q2Y0W8 1093 aa8.8□□□□□ -1
VPS45-213ENST00000618148 RCSD1Q6JBY9 416 aa8.8□□□□□ -1
VPS45-213ENST00000618148 ZSCAN29Q8IWY8 852 aaPredicted RBP8.8□□□□□ -1
VPS45-213ENST00000618148 HOOK2Q96ED9 719 aa8.8□□□□□ -1
VPS45-213ENST00000618148 TCEANC2Q96MN5 208 aa8.8□□□□□ -1
VPS45-213ENST00000618148 ZSCAN10Q96SZ4 725 aaPredicted RBP8.8□□□□□ -1
VPS45-213ENST00000618148 LY9Q9HBG7 655 aa8.8□□□□□ -1
VPS45-213ENST00000618148 MKNK2Q9HBH9 465 aa8.8□□□□□ -1
VPS45-213ENST00000618148 IL17RBQ9NRM6 502 aa8.8□□□□□ -1
VPS45-213ENST00000618148 PAPPA2Q9BXP8 1791 aa8.8□□□□□ -1
VPS45-213ENST00000618148 MYH8P13535 1937 aa8.79□□□□□ -1
VPS45-213ENST00000618148 PHF20L1A8MW92 1017 aa8.79□□□□□ -1
VPS45-213ENST00000618148 VEGFAP15692 232 aaPredicted RBP8.79□□□□□ -1
VPS45-213ENST00000618148 CUL4AQ13619 759 aa8.79□□□□□ -1
VPS45-213ENST00000618148 BECN1Q14457 450 aa8.79□□□□□ -1
VPS45-213ENST00000618148 SART3Q15020 963 aaKnown RBP8.79□□□□□ -1
VPS45-213ENST00000618148 CCDC178Q5BJE1 867 aa8.79□□□□□ -1
VPS45-213ENST00000618148 RRP12Q5JTH9 1297 aaKnown RBP8.79□□□□□ -1
VPS45-213ENST00000618148 Q6ZUG5 572 aa8.79□□□□□ -1
VPS45-213ENST00000618148 IQCA1Q86XH1 822 aa8.79□□□□□ -1
VPS45-213ENST00000618148 DGKHQ86XP1 1220 aa8.79□□□□□ -1
VPS45-213ENST00000618148 TMTC2Q8N394 836 aa8.79□□□□□ -1
VPS45-213ENST00000618148 CRACR2BQ8N4Y2 399 aaPredicted RBP8.79□□□□□ -1
VPS45-213ENST00000618148 ENAHQ8N8S7 591 aaPredicted RBP8.79□□□□□ -1
VPS45-213ENST00000618148 GINM1Q9NU53 330 aa8.79□□□□□ -1
VPS45-213ENST00000618148 LIMCH1Q9UPQ0 1083 aa8.79□□□□□ -1
VPS45-213ENST00000618148 TNKSO95271 1327 aa8.79□□□□□ -1
VPS45-213ENST00000618148 TSPY2A6NKD2 308 aa8.78□□□□□ -1
VPS45-213ENST00000618148 RANBP6O60518 1105 aaKnown RBP8.78□□□□□ -1
VPS45-213ENST00000618148 AKR1B1P15121 316 aa8.78□□□□□ -1
VPS45-213ENST00000618148 TFAP4Q01664 338 aa8.78□□□□□ -1
VPS45-213ENST00000618148 RRP1BQ14684 758 aaKnown RBP8.78□□□□□ -1
VPS45-213ENST00000618148 TMEM67Q5HYA8 995 aa8.78□□□□□ -1
VPS45-213ENST00000618148 CHST3Q7LGC8 479 aa8.78□□□□□ -1
VPS45-213ENST00000618148 HSCBQ8IWL3 235 aa8.78□□□□□ -1
VPS45-213ENST00000618148 SULF1Q8IWU6 871 aa8.78□□□□□ -1
VPS45-213ENST00000618148 ZNF444Q8N0Y2 327 aaPredicted RBP8.78□□□□□ -1
VPS45-213ENST00000618148 BRF1Q92994 677 aa8.78□□□□□ -1
VPS45-213ENST00000618148 DCPSQ96C86 337 aaKnown RBP8.78□□□□□ -1
VPS45-213ENST00000618148 ZNF274Q96GC6 653 aaPredicted RBP8.78□□□□□ -1
VPS45-213ENST00000618148 TMX3Q96JJ7 454 aa8.78□□□□□ -1
VPS45-213ENST00000618148 ZSCAN31Q96LW9 406 aaPredicted RBP8.78□□□□□ -1
VPS45-213ENST00000618148 IPO9Q96P70 1041 aaKnown RBP8.78□□□□□ -1
VPS45-213ENST00000618148 UBAC1Q9BSL1 405 aa8.78□□□□□ -1
VPS45-213ENST00000618148 LRRC2Q9BYS8 371 aa8.78□□□□□ -1
VPS45-213ENST00000618148 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.78□□□□□ -1
VPS45-213ENST00000618148 GPHNQ9NQX3 736 aaPredicted RBP8.78□□□□□ -1
VPS45-213ENST00000618148 SH2B1Q9NRF2 756 aaPredicted RBP8.78□□□□□ -1
VPS45-213ENST00000618148 TOMM22Q9NS69 142 aa8.78□□□□□ -1
VPS45-213ENST00000618148 ZNF112Q9UJU3 913 aa8.78□□□□□ -1
VPS45-213ENST00000618148 TPCN1Q9ULQ1 816 aa8.78□□□□□ -1
VPS45-213ENST00000618148 SYNPO2Q9UMS6 1093 aa8.78□□□□□ -1
VPS45-213ENST00000618148 FAM196BA6NMK8 535 aa8.78□□□□□ -1
VPS45-213ENST00000618148 IFIT3O14879 490 aaKnown RBP8.78□□□□□ -1
VPS45-213ENST00000618148 TSPY3P0CV98 308 aa8.78□□□□□ -1
VPS45-213ENST00000618148 TSPY8P0CW00 308 aa8.78□□□□□ -1
VPS45-213ENST00000618148 SLURP2P0DP57 97 aa8.78□□□□□ -1
VPS45-213ENST00000618148 SUPT20HL1Q3ZLR7 823 aa8.78□□□□□ -1
VPS45-213ENST00000618148 CERKLQ49MI3 558 aaPredicted RBP8.78□□□□□ -1
VPS45-213ENST00000618148 FAM47AQ5JRC9 791 aa8.78□□□□□ -1
VPS45-213ENST00000618148 PPP4R3BQ5MIZ7 849 aa8.78□□□□□ -1
VPS45-213ENST00000618148 NBPF12Q5TAG4 269 aaPredicted RBP8.78□□□□□ -1
VPS45-213ENST00000618148 DCAF15Q66K64 600 aa8.78□□□□□ -1
VPS45-213ENST00000618148 APOA5Q6Q788 366 aa8.78□□□□□ -1
VPS45-213ENST00000618148 TMEM179Q6ZVK1 233 aa8.78□□□□□ -1
VPS45-213ENST00000618148 KRT26Q7Z3Y9 468 aa8.78□□□□□ -1
VPS45-213ENST00000618148 STK11IPQ8N1F8 1099 aa8.78□□□□□ -1
VPS45-213ENST00000618148 SENP2Q9HC62 589 aa8.78□□□□□ -1
VPS45-213ENST00000618148 MTMR4Q9NYA4 1195 aa8.78□□□□□ -1
VPS45-213ENST00000618148 BRPF3Q9ULD4 1205 aa8.78□□□□□ -1
VPS45-213ENST00000618148 HPS5Q9UPZ3 1129 aa8.78□□□□□ -1
VPS45-213ENST00000618148 POLR2AP24928 1970 aaKnown RBP8.78□□□□□ -1
VPS45-213ENST00000618148 NMT2O60551 498 aa8.77□□□□□ -1.01
VPS45-213ENST00000618148 PFKFB2O60825 505 aa8.77□□□□□ -1.01
VPS45-213ENST00000618148 PDIA3P30101 505 aaKnown RBP8.77□□□□□ -1.01
VPS45-213ENST00000618148 GUCY1A2P33402 732 aa8.77□□□□□ -1.01
VPS45-213ENST00000618148 CAP2P40123 477 aa8.77□□□□□ -1.01
VPS45-213ENST00000618148 JAG1P78504 1218 aa8.77□□□□□ -1.01
VPS45-213ENST00000618148 ST3GAL1Q11201 340 aa8.77□□□□□ -1.01
VPS45-213ENST00000618148 WTAPQ15007 396 aa8.77□□□□□ -1.01
VPS45-213ENST00000618148 ME3Q16798 604 aa8.77□□□□□ -1.01
VPS45-213ENST00000618148 GPR153Q6NV75 609 aa8.77□□□□□ -1.01
VPS45-213ENST00000618148 LDHDQ86WU2 507 aa8.77□□□□□ -1.01
VPS45-213ENST00000618148 CEP95Q96GE4 821 aa8.77□□□□□ -1.01
VPS45-213ENST00000618148 INTS4Q96HW7 963 aaKnown RBP8.77□□□□□ -1.01
VPS45-213ENST00000618148 MAP3K14Q99558 947 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms