RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 HPDP32754 393 aaPredicted RBP7.51□□□□□ -1.21
LMO3-235ENST00000616247 GUCY1A2P33402 732 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 USP5P45974 858 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 USP14P54578 494 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 ANTXR2P58335 489 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 ZC3H6P61129 1189 aaKnown RBP7.51□□□□□ -1.21
LMO3-235ENST00000616247 ERVK-24P63145 666 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 PTPAQ15257 358 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 ZNF174Q15697 407 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 CCDC57Q2TAC2 916 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 NOSTRINQ8IVI9 506 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 RAPGEF4Q8WZA2 1011 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 ZNF496Q96IT1 587 aaPredicted RBP7.51□□□□□ -1.21
LMO3-235ENST00000616247 CTAGE1Q96RT6 745 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 SEC31BQ9NQW1 1179 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 NRKQ7Z2Y5 1582 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 TRIM21P19474 475 aaKnown RBP7.51□□□□□ -1.21
LMO3-235ENST00000616247 CCDC96Q2M329 555 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 ESCO1Q5FWF5 840 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 APOA5Q6Q788 366 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 CYB5R4Q7L1T6 521 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 ANKRD13CQ8N6S4 541 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 UBAC1Q9BSL1 405 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 NAA15Q9BXJ9 866 aaKnown RBP7.51□□□□□ -1.21
LMO3-235ENST00000616247 CD248Q9HCU0 757 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 SMARCAL1Q9NZC9 954 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 SUFUQ9UMX1 484 aa7.51□□□□□ -1.21
LMO3-235ENST00000616247 LUC7L2Q9Y383 392 aaKnown RBP7.51□□□□□ -1.21
LMO3-235ENST00000616247 PXDNLA1KZ92 1463 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 A0A1B0GTH6 734 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 ERICH2A1L162 156 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 HSF2BPO75031 334 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 MYBL2P10244 700 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 CD44P16070 742 aaKnown RBP7.5□□□□□ -1.21
LMO3-235ENST00000616247 ZNF18P17022 549 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 NF2P35240 595 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 PDE6BP35913 854 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 TUBB2AQ13885 445 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 E2F5Q15329 346 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 ENOX2Q16206 610 aaKnown RBP7.5□□□□□ -1.21
LMO3-235ENST00000616247 RASGRP2Q7LDG7 609 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 TUBB2BQ9BVA1 445 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 MTMR7Q9Y216 660 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.5□□□□□ -1.21
LMO3-235ENST00000616247 CLTCQ00610 1675 aaKnown RBP7.5□□□□□ -1.21
LMO3-235ENST00000616247 RNF225M0QZC1 329 aaPredicted RBP7.5□□□□□ -1.21
LMO3-235ENST00000616247 MYO1BO43795 1136 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 NDUFA10O95299 355 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 TUBB4BP68371 445 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 CTDSPL2Q05D32 466 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 CKAP4Q07065 602 aaKnown RBP7.5□□□□□ -1.21
LMO3-235ENST00000616247 IFT88Q13099 833 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 MORC3Q14149 939 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 KRT31Q15323 416 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 EZH2Q15910 746 aaKnown RBP7.5□□□□□ -1.21
LMO3-235ENST00000616247 ODF2Q5BJF6 829 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 KANK3Q6NY19 840 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 ZNF790Q6PG37 636 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 MAATS1Q7Z4T9 603 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 MB21D2Q8IYB1 491 aaPredicted RBP7.5□□□□□ -1.21
LMO3-235ENST00000616247 RRP36Q96EU6 259 aaKnown RBP7.5□□□□□ -1.21
LMO3-235ENST00000616247 ABHD10Q9NUJ1 306 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 MAGEC2Q9UBF1 373 aaPredicted RBP7.5□□□□□ -1.21
LMO3-235ENST00000616247 CEP83Q9Y592 693 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 CDHR2Q9BYE9 1310 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 FAM205CA6NFA0 338 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 TRIM75PA6NK02 468 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 KRT86O43790 486 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 LTKP29376 864 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 IL15P40933 162 aaPredicted RBP7.5□□□□□ -1.21
LMO3-235ENST00000616247 FXR2P51116 673 aaKnown RBP eCLIP7.5□□□□□ -1.21
LMO3-235ENST00000616247 GUCY2FP51841 1108 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 PPFIA1Q13136 1202 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 SCARF1Q14162 830 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 PPP2R5AQ15172 486 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 TICAM2Q86XR7 235 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 KIRREL3Q8IZU9 778 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 OXER1Q8TDS5 423 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 SMCR8Q8TEV9 937 aaPredicted RBP7.5□□□□□ -1.21
LMO3-235ENST00000616247 IP6K1Q92551 441 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 CCDC114Q96M63 670 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 MED15Q96RN5 788 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 AGXT2Q9BYV1 514 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 NAPBQ9H115 298 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 SLC24A3Q9HC58 644 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 PPANQ9NQ55 473 aaKnown RBP7.5□□□□□ -1.21
LMO3-235ENST00000616247 VPS54Q9P1Q0 977 aa7.5□□□□□ -1.21
LMO3-235ENST00000616247 ADD3Q9UEY8 706 aaKnown RBP7.5□□□□□ -1.21
LMO3-235ENST00000616247 ZMYM6O95789 1325 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 GOLGA6L7A0A1B0GV03 622 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 BACH1O14867 736 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 OPA1O60313 960 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 PRDM1O75626 825 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 RPSAP08865 295 aaKnown RBP7.49□□□□□ -1.21
LMO3-235ENST00000616247 COPB1P53618 953 aaKnown RBP7.49□□□□□ -1.21
LMO3-235ENST00000616247 RTN1Q16799 776 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 AMOTQ4VCS5 1084 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 XAGE2Q96GT9 111 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 CABS1Q96KC9 395 aa7.49□□□□□ -1.21
LMO3-235ENST00000616247 CEP131Q9UPN4 1083 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms