RNA–Protein interactions for RNA: ENST00000614929.4

SNX21-213, Transcript of sorting nexin family member 21, humanhuman

TSL 5 BASIC

Gene SNX21, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-213ENST00000614929 USP17L13C9JLJ4 530 aa23.36■■□□□ 1.33
SNX21-213ENST00000614929 USP17L11C9JVI0 530 aa23.36■■□□□ 1.33
SNX21-213ENST00000614929 USP17L18D6R9N7 530 aa23.36■■□□□ 1.33
SNX21-213ENST00000614929 USP17L22D6RA61 530 aa23.36■■□□□ 1.33
SNX21-213ENST00000614929 USP17L17D6RBQ6 530 aa23.36■■□□□ 1.33
SNX21-213ENST00000614929 USP17L19D6RCP7 530 aa23.36■■□□□ 1.33
SNX21-213ENST00000614929 USP17L20D6RJB6 530 aa23.36■■□□□ 1.33
SNX21-213ENST00000614929 HMGCRP04035 888 aa23.36■■□□□ 1.33
SNX21-213ENST00000614929 EVX2Q03828 476 aa23.36■■□□□ 1.33
SNX21-213ENST00000614929 USP17L24Q0WX57 530 aa23.36■■□□□ 1.33
SNX21-213ENST00000614929 UBE3CQ15386 1083 aa23.36■■□□□ 1.33
SNX21-213ENST00000614929 ACER1Q8TDN7 264 aa23.36■■□□□ 1.33
SNX21-213ENST00000614929 CRISPLD2Q9H0B8 497 aa23.36■■□□□ 1.33
SNX21-213ENST00000614929 ARMT1Q9H993 441 aa23.36■■□□□ 1.33
SNX21-213ENST00000614929 ATP8A2Q9NTI2 1148 aa23.36■■□□□ 1.33
SNX21-213ENST00000614929 RLFQ13129 1914 aa23.35■■□□□ 1.33
SNX21-213ENST00000614929 PEX10O60683 326 aa23.35■■□□□ 1.33
SNX21-213ENST00000614929 MAPK4P31152 587 aa23.35■■□□□ 1.33
SNX21-213ENST00000614929 Q3C1V9 767 aa23.35■■□□□ 1.33
SNX21-213ENST00000614929 HABP4Q5JVS0 413 aaKnown RBP23.35■■□□□ 1.33
SNX21-213ENST00000614929 SOCS4Q8WXH5 440 aa23.35■■□□□ 1.33
SNX21-213ENST00000614929 BCL11AQ9H165 835 aa23.35■■□□□ 1.33
SNX21-213ENST00000614929 SWAP70Q9UH65 585 aa23.35■■□□□ 1.33
SNX21-213ENST00000614929 FARP2O94887 1054 aaPredicted RBP23.34■■□□□ 1.33
SNX21-213ENST00000614929 MBD4O95243 580 aa23.34■■□□□ 1.33
SNX21-213ENST00000614929 XRCC5P13010 732 aaKnown RBP23.34■■□□□ 1.33
SNX21-213ENST00000614929 VCAM1P19320 739 aa23.34■■□□□ 1.33
SNX21-213ENST00000614929 ZYXQ15942 572 aaKnown RBP23.34■■□□□ 1.33
SNX21-213ENST00000614929 SLFNL1Q499Z3 407 aa23.34■■□□□ 1.33
SNX21-213ENST00000614929 LBX2Q6XYB7 198 aa23.34■■□□□ 1.33
SNX21-213ENST00000614929 CATSPERGQ6ZRH7 1159 aa23.34■■□□□ 1.33
SNX21-213ENST00000614929 DEFB118Q96PH6 123 aa23.34■■□□□ 1.33
SNX21-213ENST00000614929 HTATIP2Q9BUP3 242 aa23.34■■□□□ 1.33
SNX21-213ENST00000614929 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.34■■□□□ 1.33
SNX21-213ENST00000614929 DCTPP1Q9H773 170 aa23.34■■□□□ 1.33
SNX21-213ENST00000614929 RABGAP1Q9Y3P9 1069 aa23.34■■□□□ 1.33
SNX21-213ENST00000614929 SMARCA5O60264 1052 aaPredicted RBP23.33■■□□□ 1.33
SNX21-213ENST00000614929 SEPT2Q15019 361 aa23.33■■□□□ 1.33
SNX21-213ENST00000614929 USP6NLQ92738 828 aa23.33■■□□□ 1.33
SNX21-213ENST00000614929 NUDT12Q9BQG2 462 aa23.33■■□□□ 1.33
SNX21-213ENST00000614929 PORCNQ9H237 461 aa23.33■■□□□ 1.33
SNX21-213ENST00000614929 ALPK3Q96L96 1907 aa23.33■■□□□ 1.32
SNX21-213ENST00000614929 PARP14Q460N5 1801 aa23.32■■□□□ 1.32
SNX21-213ENST00000614929 H0YGN5 161 aa23.32■■□□□ 1.32
SNX21-213ENST00000614929 PRKAB2O43741 272 aa23.32■■□□□ 1.32
SNX21-213ENST00000614929 CYP2D6P10635 497 aa23.32■■□□□ 1.32
SNX21-213ENST00000614929 ZSCAN25Q6NSZ9 544 aa23.32■■□□□ 1.32
SNX21-213ENST00000614929 TRIB2Q92519 343 aa23.32■■□□□ 1.32
SNX21-213ENST00000614929 PAGR1Q9BTK6 254 aa23.32■■□□□ 1.32
SNX21-213ENST00000614929 ECHDC1Q9NTX5 307 aa23.32■■□□□ 1.32
SNX21-213ENST00000614929 A0A0G2JMZ2 1700 aa23.32■■□□□ 1.32
SNX21-213ENST00000614929 RPTORQ8N122 1335 aa23.32■■□□□ 1.32
SNX21-213ENST00000614929 CNMDO75829 334 aa23.31■■□□□ 1.32
SNX21-213ENST00000614929 CHGBP05060 677 aa23.31■■□□□ 1.32
SNX21-213ENST00000614929 MAP3K21Q5TCX8 1036 aa23.31■■□□□ 1.32
SNX21-213ENST00000614929 TMEM179Q6ZVK1 233 aa23.31■■□□□ 1.32
SNX21-213ENST00000614929 GPR142Q7Z601 462 aa23.31■■□□□ 1.32
SNX21-213ENST00000614929 SLC44A5Q8NCS7 719 aa23.31■■□□□ 1.32
SNX21-213ENST00000614929 A0A1W2PRG0 241 aa23.3■■□□□ 1.32
SNX21-213ENST00000614929 TFRCP02786 760 aaKnown RBP23.3■■□□□ 1.32
SNX21-213ENST00000614929 CYP2B6P20813 491 aa23.3■■□□□ 1.32
SNX21-213ENST00000614929 MORN1Q5T089 497 aa23.3■■□□□ 1.32
SNX21-213ENST00000614929 C12orf60Q5U649 245 aa23.3■■□□□ 1.32
SNX21-213ENST00000614929 TRMT44Q8IYL2 757 aaKnown RBP23.3■■□□□ 1.32
SNX21-213ENST00000614929 HMX1Q9NP08 348 aaPredicted RBP23.3■■□□□ 1.32
SNX21-213ENST00000614929 TRIM32Q13049 653 aa23.29■■□□□ 1.32
SNX21-213ENST00000614929 PLEKHH3Q7Z736 793 aa23.29■■□□□ 1.32
SNX21-213ENST00000614929 ANKLE1Q8NAG6 615 aa23.29■■□□□ 1.32
SNX21-213ENST00000614929 DPF3Q92784 378 aa23.29■■□□□ 1.32
SNX21-213ENST00000614929 DYNLL2Q96FJ2 89 aa23.29■■□□□ 1.32
SNX21-213ENST00000614929 RPAP3Q9H6T3 665 aaPredicted RBP23.29■■□□□ 1.32
SNX21-213ENST00000614929 TRIOBPQ9H2D6 2365 aa23.28■■□□□ 1.32
SNX21-213ENST00000614929 GREB1LQ9C091 1923 aaPredicted RBP23.28■■□□□ 1.32
SNX21-213ENST00000614929 SPDYE16A6NNV3 312 aaPredicted RBP23.28■■□□□ 1.32
SNX21-213ENST00000614929 MPHOSPH10O00566 681 aaKnown RBP23.28■■□□□ 1.32
SNX21-213ENST00000614929 CCNA1P78396 465 aa23.28■■□□□ 1.32
SNX21-213ENST00000614929 CCAR1Q8IX12 1150 aaKnown RBP23.28■■□□□ 1.32
SNX21-213ENST00000614929 CCDC17Q96LX7 622 aa23.28■■□□□ 1.32
SNX21-213ENST00000614929 PUS7LQ9H0K6 701 aaKnown RBP23.28■■□□□ 1.32
SNX21-213ENST00000614929 PCDH10Q9P2E7 1040 aa23.28■■□□□ 1.32
SNX21-213ENST00000614929 COLQQ9Y215 455 aaPredicted RBP23.28■■□□□ 1.32
SNX21-213ENST00000614929 RANBP2P49792 3224 aaKnown RBP23.28■■□□□ 1.32
SNX21-213ENST00000614929 FRMPD3Q5JV73 1810 aa23.27■■□□□ 1.32
SNX21-213ENST00000614929 ZNF236Q9UL36 1845 aa23.27■■□□□ 1.32
SNX21-213ENST00000614929 USP17L12C9JPN9 530 aa23.27■■□□□ 1.32
SNX21-213ENST00000614929 USP17L21D6R901 530 aa23.27■■□□□ 1.32
SNX21-213ENST00000614929 RGS2P41220 211 aa23.27■■□□□ 1.32
SNX21-213ENST00000614929 C16orf86Q6ZW13 317 aa23.27■■□□□ 1.32
SNX21-213ENST00000614929 BTBD7Q9P203 1132 aa23.27■■□□□ 1.32
SNX21-213ENST00000614929 AKR1B1P15121 316 aa23.26■■□□□ 1.31
SNX21-213ENST00000614929 SIAH1Q8IUQ4 282 aa23.26■■□□□ 1.31
SNX21-213ENST00000614929 AMOTL1Q8IY63 956 aa23.26■■□□□ 1.31
SNX21-213ENST00000614929 KBTBD3Q8NAB2 608 aa23.26■■□□□ 1.31
SNX21-213ENST00000614929 DDRGK1Q96HY6 314 aa23.26■■□□□ 1.31
SNX21-213ENST00000614929 GPATCH3Q96I76 525 aa23.26■■□□□ 1.31
SNX21-213ENST00000614929 APBA2Q99767 749 aa23.26■■□□□ 1.31
SNX21-213ENST00000614929 TMX2Q9Y320 296 aa23.26■■□□□ 1.31
SNX21-213ENST00000614929 SLC4A4Q9Y6R1 1079 aa23.26■■□□□ 1.31
SNX21-213ENST00000614929 CYP2D7A0A087X1C5 515 aa23.25■■□□□ 1.31
SNX21-213ENST00000614929 SMIM22K7EJ46 135 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms